RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TMEM132EQ6IEE7 984 aa29.71■■■□□ 2.35
CLN6-207ENST00000566347 ZNF772Q68DY9 489 aaPredicted RBP29.7■■■□□ 2.35
CLN6-207ENST00000566347 ORAI2Q96SN7 254 aa29.7■■■□□ 2.35
CLN6-207ENST00000566347 C14orf93Q9H972 538 aaKnown RBP29.7■■■□□ 2.35
CLN6-207ENST00000566347 YTHDC2Q9H6S0 1430 aaKnown RBP29.7■■■□□ 2.34
CLN6-207ENST00000566347 NUTM2BA6NNL0 878 aaPredicted RBP29.69■■■□□ 2.34
CLN6-207ENST00000566347 NUTM2EB1AL46 878 aaPredicted RBP29.69■■■□□ 2.34
CLN6-207ENST00000566347 NUTM2AQ8IVF1 878 aaPredicted RBP29.69■■■□□ 2.34
CLN6-207ENST00000566347 PNPLA6Q8IY17 1366 aa29.68■■■□□ 2.34
CLN6-207ENST00000566347 WAPLQ7Z5K2 1190 aa29.68■■■□□ 2.34
CLN6-207ENST00000566347 SOS2Q07890 1332 aaPredicted RBP29.66■■■□□ 2.34
CLN6-207ENST00000566347 SIRT1Q96EB6 747 aa29.65■■■□□ 2.34
CLN6-207ENST00000566347 DHX57Q6P158 1386 aaKnown RBP29.64■■■□□ 2.33
CLN6-207ENST00000566347 PLEKHH1Q9ULM0 1364 aa29.63■■■□□ 2.33
CLN6-207ENST00000566347 ESCO1Q5FWF5 840 aa29.62■■■□□ 2.33
CLN6-207ENST00000566347 CFAP70Q5T0N1 1121 aa29.62■■■□□ 2.33
CLN6-207ENST00000566347 NPHP3Q7Z494 1330 aa29.6■■■□□ 2.33
CLN6-207ENST00000566347 FMN2Q9NZ56 1722 aa29.57■■■□□ 2.32
CLN6-207ENST00000566347 AFF2P51816 1311 aa29.56■■■□□ 2.32
CLN6-207ENST00000566347 STAC3Q96MF2 364 aa29.55■■■□□ 2.32
CLN6-207ENST00000566347 NUTM2FA1L443 756 aa29.53■■■□□ 2.32
CLN6-207ENST00000566347 C8orf37Q96NL8 207 aa29.53■■■□□ 2.32
CLN6-207ENST00000566347 PXDNQ92626 1479 aa29.53■■■□□ 2.32
CLN6-207ENST00000566347 DLC1Q96QB1 1528 aa29.52■■■□□ 2.32
CLN6-207ENST00000566347 DCAF11Q8TEB1 546 aa29.52■■■□□ 2.32
CLN6-207ENST00000566347 FOXO3O43524 673 aa29.51■■■□□ 2.31
CLN6-207ENST00000566347 RXRBP28702 533 aa29.51■■■□□ 2.31
CLN6-207ENST00000566347 COL22A1Q8NFW1 1626 aaPredicted RBP29.51■■■□□ 2.31
CLN6-207ENST00000566347 PRAM1Q96QH2 718 aa29.5■■■□□ 2.31
CLN6-207ENST00000566347 KDM2AQ9Y2K7 1162 aa29.5■■■□□ 2.31
CLN6-207ENST00000566347 ADGRB1O14514 1584 aa29.5■■■□□ 2.31
CLN6-207ENST00000566347 KIF1AQ12756 1690 aa29.5■■■□□ 2.31
CLN6-207ENST00000566347 ADAMTS2O95450 1211 aa29.49■■■□□ 2.31
CLN6-207ENST00000566347 POGKQ9P215 609 aa29.47■■■□□ 2.31
CLN6-207ENST00000566347 NGLY1Q96IV0 654 aa29.46■■■□□ 2.31
CLN6-207ENST00000566347 CDK12Q9NYV4 1490 aaPredicted RBP29.46■■■□□ 2.31
CLN6-207ENST00000566347 XPCQ01831 940 aaPredicted RBP29.44■■■□□ 2.3
CLN6-207ENST00000566347 SAFB2Q14151 953 aaKnown RBP eCLIP29.44■■■□□ 2.3
CLN6-207ENST00000566347 QTRT2Q9H974 415 aaKnown RBP29.42■■■□□ 2.3
CLN6-207ENST00000566347 ADGRB2O60241 1585 aa29.41■■■□□ 2.3
CLN6-207ENST00000566347 TRAK1Q9UPV9 953 aa29.41■■■□□ 2.3
CLN6-207ENST00000566347 RGPD8O14715 1765 aaPredicted RBP29.41■■■□□ 2.3
CLN6-207ENST00000566347 PHF8Q9UPP1 1060 aa29.4■■■□□ 2.3
CLN6-207ENST00000566347 RBM6P78332 1123 aaKnown RBP29.39■■■□□ 2.3
CLN6-207ENST00000566347 ANKARQ7Z5J8 1434 aa29.38■■■□□ 2.29
CLN6-207ENST00000566347 KRT28Q7Z3Y7 464 aa29.37■■■□□ 2.29
CLN6-207ENST00000566347 SPATA31A3Q5VYP0 1347 aa29.37■■■□□ 2.29
CLN6-207ENST00000566347 FNBP4Q8N3X1 1017 aaPredicted RBP29.36■■■□□ 2.29
CLN6-207ENST00000566347 USP21Q9UK80 565 aa29.36■■■□□ 2.29
CLN6-207ENST00000566347 PSME1Q06323 249 aa29.35■■■□□ 2.29
CLN6-207ENST00000566347 MARF1Q9Y4F3 1742 aaKnown RBP29.34■■■□□ 2.29
CLN6-207ENST00000566347 EIF3AQ14152 1382 aaKnown RBP29.34■■■□□ 2.29
CLN6-207ENST00000566347 USP32Q8NFA0 1604 aa29.32■■■□□ 2.28
CLN6-207ENST00000566347 TRPC5Q9UL62 973 aaPredicted RBP29.32■■■□□ 2.28
CLN6-207ENST00000566347 MINK1Q8N4C8 1332 aaPredicted RBP29.31■■■□□ 2.28
CLN6-207ENST00000566347 HIRIP3Q9BW71 556 aaPredicted RBP29.31■■■□□ 2.28
CLN6-207ENST00000566347 TNS3Q68CZ2 1445 aa29.3■■■□□ 2.28
CLN6-207ENST00000566347 RGS12O14924 1447 aa29.29■■■□□ 2.28
CLN6-207ENST00000566347 SBNO1A3KN83 1393 aa29.29■■■□□ 2.28
CLN6-207ENST00000566347 ARHGEF28Q8N1W1 1705 aaKnown RBP29.28■■■□□ 2.28
CLN6-207ENST00000566347 KIAA1210Q9ULL0 1709 aa29.28■■■□□ 2.28
CLN6-207ENST00000566347 TULP4Q9NRJ4 1543 aa29.27■■■□□ 2.28
CLN6-207ENST00000566347 WASLO00401 505 aaPredicted RBP29.27■■■□□ 2.28
CLN6-207ENST00000566347 UPF1Q92900 1129 aaKnown RBP eCLIP29.27■■■□□ 2.282e-9■■■□□ 15.7
CLN6-207ENST00000566347 ATRNO75882 1429 aa29.27■■■□□ 2.28
CLN6-207ENST00000566347 PMFBP1Q8TBY8 1022 aa29.25■■■□□ 2.27
CLN6-207ENST00000566347 ARHGEF10O15013 1369 aa29.25■■■□□ 2.27
CLN6-207ENST00000566347 BCL9LQ86UU0 1499 aa29.23■■■□□ 2.27
CLN6-207ENST00000566347 PRR36Q9H6K5 1346 aa29.21■■■□□ 2.27
CLN6-207ENST00000566347 HAP1P54257 671 aaPredicted RBP29.21■■■□□ 2.27
CLN6-207ENST00000566347 GPRASP1Q5JY77 1395 aa29.2■■■□□ 2.26
CLN6-207ENST00000566347 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.2■■■□□ 2.26
CLN6-207ENST00000566347 LMOD2Q6P5Q4 547 aa29.19■■■□□ 2.26
CLN6-207ENST00000566347 SLIT2O94813 1529 aa29.17■■■□□ 2.26
CLN6-207ENST00000566347 ITSN1Q15811 1721 aa29.17■■■□□ 2.26
CLN6-207ENST00000566347 TRPM3Q9HCF6 1732 aaPredicted RBP29.17■■■□□ 2.26
CLN6-207ENST00000566347 UNC5CLQ8IV45 518 aa29.16■■■□□ 2.26
CLN6-207ENST00000566347 ABCA3Q99758 1704 aa29.15■■■□□ 2.26
CLN6-207ENST00000566347 CABLES1Q8TDN4 633 aa29.15■■■□□ 2.26
CLN6-207ENST00000566347 NGDNQ8NEJ9 315 aaKnown RBP29.14■■■□□ 2.26
CLN6-207ENST00000566347 GJD4Q96KN9 370 aaPredicted RBP29.14■■■□□ 2.26
CLN6-207ENST00000566347 ATP7BP35670 1465 aa29.14■■■□□ 2.26
CLN6-207ENST00000566347 NBPF1Q3BBV0 1214 aa29.12■■■□□ 2.25
CLN6-207ENST00000566347 NUDT16Q96DE0 195 aaKnown RBP29.12■■■□□ 2.25
CLN6-207ENST00000566347 ATAD2Q6PL18 1390 aa29.12■■■□□ 2.25
CLN6-207ENST00000566347 ALS2Q96Q42 1657 aa29.12■■■□□ 2.25
CLN6-207ENST00000566347 PLEKHG5O94827 1062 aa29.11■■■□□ 2.25
CLN6-207ENST00000566347 CDK19Q9BWU1 502 aa29.1■■■□□ 2.25
CLN6-207ENST00000566347 NWD2Q9ULI1 1742 aa29.09■■■□□ 2.25
CLN6-207ENST00000566347 L3MBTL2Q969R5 705 aa29.08■■■□□ 2.25
CLN6-207ENST00000566347 PLCH1Q4KWH8 1693 aa29.08■■■□□ 2.25
CLN6-207ENST00000566347 RALGAPBQ86X10 1494 aa29.07■■■□□ 2.24
CLN6-207ENST00000566347 CENPJQ9HC77 1338 aaPredicted RBP29.04■■■□□ 2.24
CLN6-207ENST00000566347 PAK3O75914 559 aaPredicted RBP29.04■■■□□ 2.24
CLN6-207ENST00000566347 SIN3AQ96ST3 1273 aa29.04■■■□□ 2.24
CLN6-207ENST00000566347 CCDC61Q9Y6R9 512 aa29.04■■■□□ 2.24
CLN6-207ENST00000566347 TOPAZ1Q8N9V7 1692 aa29.04■■■□□ 2.24
CLN6-207ENST00000566347 GLI3P10071 1580 aa29.04■■■□□ 2.24
CLN6-207ENST00000566347 VPS72Q15906 364 aa29.03■■■□□ 2.24
CLN6-207ENST00000566347 FAM83GA6ND36 823 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms