RNA–Protein interactions for RNA: ENST00000566327.5

SNAP23-213, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-213ENST00000566327 PHF23Q9BUL5 403 aaPredicted RBP28.53■■■□□ 2.16
SNAP23-213ENST00000566327 C1orf167Q5SNV9 1468 aa28.52■■■□□ 2.16
SNAP23-213ENST00000566327 SHPRHQ149N8 1683 aa28.51■■■□□ 2.15
SNAP23-213ENST00000566327 ADGRB1O14514 1584 aa28.47■■■□□ 2.15
SNAP23-213ENST00000566327 SPATA31A6Q5VVP1 1343 aa28.46■■■□□ 2.15
SNAP23-213ENST00000566327 FMN2Q9NZ56 1722 aa28.46■■■□□ 2.15
SNAP23-213ENST00000566327 WAPLQ7Z5K2 1190 aa28.45■■■□□ 2.14
SNAP23-213ENST00000566327 POGKQ9P215 609 aa28.44■■■□□ 2.14
SNAP23-213ENST00000566327 LRRC59Q96AG4 307 aaKnown RBP28.43■■■□□ 2.14
SNAP23-213ENST00000566327 KIF1AQ12756 1690 aa28.42■■■□□ 2.14
SNAP23-213ENST00000566327 EIF3AQ14152 1382 aaKnown RBP28.39■■■□□ 2.14
SNAP23-213ENST00000566327 ADGRB2O60241 1585 aa28.39■■■□□ 2.14
SNAP23-213ENST00000566327 PRAM1Q96QH2 718 aa28.39■■■□□ 2.14
SNAP23-213ENST00000566327 PLEKHH1Q9ULM0 1364 aa28.38■■■□□ 2.13
SNAP23-213ENST00000566327 NPHP3Q7Z494 1330 aa28.38■■■□□ 2.13
SNAP23-213ENST00000566327 ARHGEF28Q8N1W1 1705 aaKnown RBP28.37■■■□□ 2.13
SNAP23-213ENST00000566327 ESCO1Q5FWF5 840 aa28.36■■■□□ 2.13
SNAP23-213ENST00000566327 TRAK1Q9UPV9 953 aa28.36■■■□□ 2.13
SNAP23-213ENST00000566327 ORAI2Q96SN7 254 aa28.33■■■□□ 2.13
SNAP23-213ENST00000566327 ANKARQ7Z5J8 1434 aa28.31■■■□□ 2.12
SNAP23-213ENST00000566327 RGPD8O14715 1765 aaPredicted RBP28.3■■■□□ 2.12
SNAP23-213ENST00000566327 SOS2Q07890 1332 aaPredicted RBP28.3■■■□□ 2.12
SNAP23-213ENST00000566327 MEX3CQ5U5Q3 659 aaKnown RBP28.3■■■□□ 2.12
SNAP23-213ENST00000566327 SAFB2Q14151 953 aaKnown RBP eCLIP28.29■■■□□ 2.12
SNAP23-213ENST00000566327 NEUROD1Q13562 356 aa28.28■■■□□ 2.12
SNAP23-213ENST00000566327 L3MBTL2Q969R5 705 aa28.27■■■□□ 2.12
SNAP23-213ENST00000566327 ITSN1Q15811 1721 aa28.26■■■□□ 2.12
SNAP23-213ENST00000566327 ILDR2Q71H61 639 aa28.25■■■□□ 2.11
SNAP23-213ENST00000566327 SIN3AQ96ST3 1273 aa28.25■■■□□ 2.11
SNAP23-213ENST00000566327 PNPLA6Q8IY17 1366 aa28.24■■■□□ 2.11
SNAP23-213ENST00000566327 NUTM2FA1L443 756 aa28.24■■■□□ 2.11
SNAP23-213ENST00000566327 TRPM1Q7Z4N2 1603 aa28.23■■■□□ 2.11
SNAP23-213ENST00000566327 TULP4Q9NRJ4 1543 aa28.23■■■□□ 2.11
SNAP23-213ENST00000566327 COL22A1Q8NFW1 1626 aaPredicted RBP28.22■■■□□ 2.11
SNAP23-213ENST00000566327 DDX17Q92841 729 aaKnown RBP28.22■■■□□ 2.11
SNAP23-213ENST00000566327 PXDNQ92626 1479 aa28.21■■■□□ 2.11
SNAP23-213ENST00000566327 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
SNAP23-213ENST00000566327 FOXO3O43524 673 aa28.21■■■□□ 2.11
SNAP23-213ENST00000566327 PSME1Q06323 249 aa28.21■■■□□ 2.11
SNAP23-213ENST00000566327 PHF8Q9UPP1 1060 aa28.21■■■□□ 2.11
SNAP23-213ENST00000566327 TONSLQ96HA7 1378 aa28.21■■■□□ 2.11
SNAP23-213ENST00000566327 LRP6O75581 1613 aa28.2■■■□□ 2.1
SNAP23-213ENST00000566327 WASLO00401 505 aaPredicted RBP28.19■■■□□ 2.1
SNAP23-213ENST00000566327 ZNF772Q68DY9 489 aaPredicted RBP28.19■■■□□ 2.1
SNAP23-213ENST00000566327 NUTM2BA6NNL0 878 aaPredicted RBP28.18■■■□□ 2.1
SNAP23-213ENST00000566327 NUTM2EB1AL46 878 aaPredicted RBP28.18■■■□□ 2.1
SNAP23-213ENST00000566327 SOCS7O14512 581 aa28.18■■■□□ 2.1
SNAP23-213ENST00000566327 NUTM2AQ8IVF1 878 aaPredicted RBP28.18■■■□□ 2.1
SNAP23-213ENST00000566327 USP32Q8NFA0 1604 aa28.18■■■□□ 2.1
SNAP23-213ENST00000566327 HIRIP3Q9BW71 556 aaPredicted RBP28.16■■■□□ 2.1
SNAP23-213ENST00000566327 ROCK2O75116 1388 aaKnown RBP28.14■■■□□ 2.1
SNAP23-213ENST00000566327 NBPF1Q3BBV0 1214 aa28.14■■■□□ 2.1
SNAP23-213ENST00000566327 CENPJQ9HC77 1338 aaPredicted RBP28.14■■■□□ 2.09
SNAP23-213ENST00000566327 QRICH2Q9H0J4 1663 aa28.13■■■□□ 2.09
SNAP23-213ENST00000566327 KRT28Q7Z3Y7 464 aa28.12■■■□□ 2.09
SNAP23-213ENST00000566327 RGS17Q9UGC6 210 aaPredicted RBP28.12■■■□□ 2.09
SNAP23-213ENST00000566327 MARF1Q9Y4F3 1742 aaKnown RBP28.12■■■□□ 2.09
SNAP23-213ENST00000566327 GPRASP1Q5JY77 1395 aa28.11■■■□□ 2.09
SNAP23-213ENST00000566327 SBNO1A3KN83 1393 aa28.11■■■□□ 2.09
SNAP23-213ENST00000566327 SPATA31A3Q5VYP0 1347 aa28.09■■■□□ 2.09
SNAP23-213ENST00000566327 ARHGEF10O15013 1369 aa28.09■■■□□ 2.09
SNAP23-213ENST00000566327 TNS3Q68CZ2 1445 aa28.09■■■□□ 2.09
SNAP23-213ENST00000566327 XPCQ01831 940 aaPredicted RBP28.07■■■□□ 2.08
SNAP23-213ENST00000566327 CLSPNQ9HAW4 1339 aa28.06■■■□□ 2.08
SNAP23-213ENST00000566327 ATP7BP35670 1465 aa28.06■■■□□ 2.08
SNAP23-213ENST00000566327 TOPAZ1Q8N9V7 1692 aa28.05■■■□□ 2.08
SNAP23-213ENST00000566327 CDK19Q9BWU1 502 aa28.05■■■□□ 2.08
SNAP23-213ENST00000566327 NGDNQ8NEJ9 315 aaKnown RBP28.04■■■□□ 2.08
SNAP23-213ENST00000566327 PMFBP1Q8TBY8 1022 aa28.04■■■□□ 2.08
SNAP23-213ENST00000566327 NUDT16Q96DE0 195 aaKnown RBP28.04■■■□□ 2.08
SNAP23-213ENST00000566327 C8orf37Q96NL8 207 aa28.04■■■□□ 2.08
SNAP23-213ENST00000566327 AFF2P51816 1311 aa28.03■■■□□ 2.08
SNAP23-213ENST00000566327 PRR36Q9H6K5 1346 aa28.02■■■□□ 2.08
SNAP23-213ENST00000566327 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
SNAP23-213ENST00000566327 NGLY1Q96IV0 654 aa28.02■■■□□ 2.08
SNAP23-213ENST00000566327 CCDC61Q9Y6R9 512 aa28.02■■■□□ 2.08
SNAP23-213ENST00000566327 RALGAPBQ86X10 1494 aa28.02■■■□□ 2.08
SNAP23-213ENST00000566327 TRPM3Q9HCF6 1732 aaPredicted RBP28.01■■■□□ 2.07
SNAP23-213ENST00000566327 ADAMTS2O95450 1211 aa28.01■■■□□ 2.07
SNAP23-213ENST00000566327 HAP1P54257 671 aaPredicted RBP28■■■□□ 2.07
SNAP23-213ENST00000566327 EVC2Q86UK5 1308 aa27.99■■■□□ 2.07
SNAP23-213ENST00000566327 SRPK2P78362 688 aaKnown RBP27.99■■■□□ 2.07
SNAP23-213ENST00000566327 ALS2Q96Q42 1657 aa27.97■■■□□ 2.07
SNAP23-213ENST00000566327 LMOD2Q6P5Q4 547 aa27.97■■■□□ 2.07
SNAP23-213ENST00000566327 CARD11Q9BXL7 1154 aa27.97■■■□□ 2.07
SNAP23-213ENST00000566327 TIMELESSQ9UNS1 1208 aa27.96■■■□□ 2.07
SNAP23-213ENST00000566327 RXRBP28702 533 aa27.95■■■□□ 2.06
SNAP23-213ENST00000566327 PCGF6Q9BYE7 350 aa27.95■■■□□ 2.06
SNAP23-213ENST00000566327 ABCA3Q99758 1704 aa27.95■■■□□ 2.06
SNAP23-213ENST00000566327 CDK12Q9NYV4 1490 aaPredicted RBP27.95■■■□□ 2.06
SNAP23-213ENST00000566327 NBPF8Q3BBV2 869 aa27.94■■■□□ 2.06
SNAP23-213ENST00000566327 POLR3AO14802 1390 aaPredicted RBP27.94■■■□□ 2.06
SNAP23-213ENST00000566327 PLEKHG3A1L390 1219 aa27.93■■■□□ 2.06
SNAP23-213ENST00000566327 SLC24A1O60721 1099 aa27.93■■■□□ 2.06
SNAP23-213ENST00000566327 BRD4O60885 1362 aaPredicted RBP27.93■■■□□ 2.06
SNAP23-213ENST00000566327 SBNO2Q9Y2G9 1366 aa27.93■■■□□ 2.06
SNAP23-213ENST00000566327 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.92■■■□□ 2.06
SNAP23-213ENST00000566327 FNBP4Q8N3X1 1017 aaPredicted RBP27.92■■■□□ 2.06
SNAP23-213ENST00000566327 USP21Q9UK80 565 aa27.91■■■□□ 2.06
SNAP23-213ENST00000566327 PPIP5K1Q6PFW1 1433 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms