RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 KIF1AQ12756 1690 aa24.37■■□□□ 1.49
USB1-211ENST00000565662 STK26Q9P289 416 aa24.35■■□□□ 1.49
USB1-211ENST00000565662 FMN2Q9NZ56 1722 aa24.35■■□□□ 1.49
USB1-211ENST00000565662 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
USB1-211ENST00000565662 ADGRB1O14514 1584 aa24.33■■□□□ 1.49
USB1-211ENST00000565662 KIAA1210Q9ULL0 1709 aa24.33■■□□□ 1.49
USB1-211ENST00000565662 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
USB1-211ENST00000565662 TMEM132EQ6IEE7 984 aa24.33■■□□□ 1.49
USB1-211ENST00000565662 DCAF11Q8TEB1 546 aa24.33■■□□□ 1.49
USB1-211ENST00000565662 ADGRB2O60241 1585 aa24.33■■□□□ 1.48
USB1-211ENST00000565662 CFAP70Q5T0N1 1121 aa24.32■■□□□ 1.48
USB1-211ENST00000565662 MEX3CQ5U5Q3 659 aaKnown RBP24.32■■□□□ 1.48
USB1-211ENST00000565662 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
USB1-211ENST00000565662 ZNF772Q68DY9 489 aaPredicted RBP24.29■■□□□ 1.48
USB1-211ENST00000565662 WAPLQ7Z5K2 1190 aa24.28■■□□□ 1.48
USB1-211ENST00000565662 LRP6O75581 1613 aa24.28■■□□□ 1.48
USB1-211ENST00000565662 PNPLA6Q8IY17 1366 aa24.27■■□□□ 1.48
USB1-211ENST00000565662 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
USB1-211ENST00000565662 COL22A1Q8NFW1 1626 aaPredicted RBP24.26■■□□□ 1.47
USB1-211ENST00000565662 ESCO1Q5FWF5 840 aa24.26■■□□□ 1.47
USB1-211ENST00000565662 POGKQ9P215 609 aa24.26■■□□□ 1.47
USB1-211ENST00000565662 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
USB1-211ENST00000565662 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
USB1-211ENST00000565662 KDM2AQ9Y2K7 1162 aa24.24■■□□□ 1.47
USB1-211ENST00000565662 PRAM1Q96QH2 718 aa24.23■■□□□ 1.47
USB1-211ENST00000565662 RGS17Q9UGC6 210 aaPredicted RBP24.22■■□□□ 1.47
USB1-211ENST00000565662 PXDNQ92626 1479 aa24.21■■□□□ 1.47
USB1-211ENST00000565662 ARHGEF28Q8N1W1 1705 aaKnown RBP24.21■■□□□ 1.47
USB1-211ENST00000565662 TULP4Q9NRJ4 1543 aa24.16■■□□□ 1.46
USB1-211ENST00000565662 ITSN1Q15811 1721 aa24.16■■□□□ 1.46
USB1-211ENST00000565662 TRAK1Q9UPV9 953 aa24.16■■□□□ 1.46
USB1-211ENST00000565662 NUTM2BA6NNL0 878 aaPredicted RBP24.15■■□□□ 1.46
USB1-211ENST00000565662 NUTM2EB1AL46 878 aaPredicted RBP24.15■■□□□ 1.46
USB1-211ENST00000565662 PSME1Q06323 249 aa24.15■■□□□ 1.46
USB1-211ENST00000565662 NUTM2AQ8IVF1 878 aaPredicted RBP24.15■■□□□ 1.46
USB1-211ENST00000565662 CDK12Q9NYV4 1490 aaPredicted RBP24.14■■□□□ 1.46
USB1-211ENST00000565662 DDX17Q92841 729 aaKnown RBP24.14■■□□□ 1.45
USB1-211ENST00000565662 FOXO3O43524 673 aa24.13■■□□□ 1.45
USB1-211ENST00000565662 POTEAQ6S8J7 498 aa24.13■■□□□ 1.45
USB1-211ENST00000565662 PHF8Q9UPP1 1060 aa24.13■■□□□ 1.45
USB1-211ENST00000565662 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
USB1-211ENST00000565662 MARF1Q9Y4F3 1742 aaKnown RBP24.11■■□□□ 1.45
USB1-211ENST00000565662 SBNO1A3KN83 1393 aa24.11■■□□□ 1.45
USB1-211ENST00000565662 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
USB1-211ENST00000565662 ARHGEF10O15013 1369 aa24.1■■□□□ 1.45
USB1-211ENST00000565662 TNS3Q68CZ2 1445 aa24.1■■□□□ 1.45
USB1-211ENST00000565662 AFF2P51816 1311 aa24.1■■□□□ 1.45
USB1-211ENST00000565662 NUTM2FA1L443 756 aa24.09■■□□□ 1.45
USB1-211ENST00000565662 USP32Q8NFA0 1604 aa24.09■■□□□ 1.45
USB1-211ENST00000565662 WASLO00401 505 aaPredicted RBP24.08■■□□□ 1.45
USB1-211ENST00000565662 TRIM26Q12899 539 aaPredicted RBP24.08■■□□□ 1.45
USB1-211ENST00000565662 SPATA31A3Q5VYP0 1347 aa24.08■■□□□ 1.44
USB1-211ENST00000565662 C8orf37Q96NL8 207 aa24.07■■□□□ 1.44
USB1-211ENST00000565662 GPRASP1Q5JY77 1395 aa24.06■■□□□ 1.44
USB1-211ENST00000565662 RXRBP28702 533 aa24.06■■□□□ 1.44
USB1-211ENST00000565662 KRT28Q7Z3Y7 464 aa24.06■■□□□ 1.44
USB1-211ENST00000565662 MINK1Q8N4C8 1332 aaPredicted RBP24.05■■□□□ 1.44
USB1-211ENST00000565662 NGLY1Q96IV0 654 aa24.04■■□□□ 1.44
USB1-211ENST00000565662 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
USB1-211ENST00000565662 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.01■■□□□ 1.43
USB1-211ENST00000565662 ATP7BP35670 1465 aa24.01■■□□□ 1.43
USB1-211ENST00000565662 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
USB1-211ENST00000565662 RBM6P78332 1123 aaKnown RBP24■■□□□ 1.43
USB1-211ENST00000565662 FNBP4Q8N3X1 1017 aaPredicted RBP24■■□□□ 1.43
USB1-211ENST00000565662 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
USB1-211ENST00000565662 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
USB1-211ENST00000565662 XPCQ01831 940 aaPredicted RBP23.99■■□□□ 1.43
USB1-211ENST00000565662 TRPC5Q9UL62 973 aaPredicted RBP23.99■■□□□ 1.43
USB1-211ENST00000565662 CENPJQ9HC77 1338 aaPredicted RBP23.99■■□□□ 1.43
USB1-211ENST00000565662 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
USB1-211ENST00000565662 TRPM3Q9HCF6 1732 aaPredicted RBP23.98■■□□□ 1.43
USB1-211ENST00000565662 HAP1P54257 671 aaPredicted RBP23.98■■□□□ 1.43
USB1-211ENST00000565662 QRICH2Q9H0J4 1663 aa23.97■■□□□ 1.43
USB1-211ENST00000565662 USP21Q9UK80 565 aa23.97■■□□□ 1.43
USB1-211ENST00000565662 ABCA3Q99758 1704 aa23.96■■□□□ 1.43
USB1-211ENST00000565662 QTRT2Q9H974 415 aaKnown RBP23.96■■□□□ 1.43
USB1-211ENST00000565662 ALS2Q96Q42 1657 aa23.95■■□□□ 1.43
USB1-211ENST00000565662 ROCK2O75116 1388 aaKnown RBP23.95■■□□□ 1.42
USB1-211ENST00000565662 NGDNQ8NEJ9 315 aaKnown RBP23.95■■□□□ 1.42
USB1-211ENST00000565662 NWD2Q9ULI1 1742 aa23.95■■□□□ 1.42
USB1-211ENST00000565662 TONSLQ96HA7 1378 aa23.94■■□□□ 1.42
USB1-211ENST00000565662 BRD4O60885 1362 aaPredicted RBP23.93■■□□□ 1.42
USB1-211ENST00000565662 PRR36Q9H6K5 1346 aa23.93■■□□□ 1.42
USB1-211ENST00000565662 NEUROD1Q13562 356 aa23.93■■□□□ 1.42
USB1-211ENST00000565662 PMFBP1Q8TBY8 1022 aa23.93■■□□□ 1.42
USB1-211ENST00000565662 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
USB1-211ENST00000565662 CCDC61Q9Y6R9 512 aa23.93■■□□□ 1.42
USB1-211ENST00000565662 ATRNO75882 1429 aa23.93■■□□□ 1.42
USB1-211ENST00000565662 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
USB1-211ENST00000565662 SIN3AQ96ST3 1273 aa23.92■■□□□ 1.42
USB1-211ENST00000565662 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
USB1-211ENST00000565662 CDK19Q9BWU1 502 aa23.91■■□□□ 1.42
USB1-211ENST00000565662 SLIT2O94813 1529 aa23.9■■□□□ 1.42
USB1-211ENST00000565662 LMOD2Q6P5Q4 547 aa23.89■■□□□ 1.41
USB1-211ENST00000565662 BCL9LQ86UU0 1499 aa23.87■■□□□ 1.41
USB1-211ENST00000565662 RGS12O14924 1447 aa23.87■■□□□ 1.41
USB1-211ENST00000565662 PLEKHG3A1L390 1219 aa23.87■■□□□ 1.41
USB1-211ENST00000565662 EVC2Q86UK5 1308 aa23.86■■□□□ 1.41
USB1-211ENST00000565662 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
USB1-211ENST00000565662 SRPK2P78362 688 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms