RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 RNF166Q96A37 237 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-204ENST00000565634 ITSN2Q9NZM3 1697 aa9.93□□□□□ -0.82
UBFD1-204ENST00000565634 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-204ENST00000565634 XIRP1Q702N8 1843 aaKnown RBP9.93□□□□□ -0.82
UBFD1-204ENST00000565634 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
UBFD1-204ENST00000565634 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
UBFD1-204ENST00000565634 LRRIQ1Q96JM4 1722 aa9.92□□□□□ -0.82
UBFD1-204ENST00000565634 A2ML1A8K2U0 1454 aa9.91□□□□□ -0.82
UBFD1-204ENST00000565634 LSM11P83369 360 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBFD1-204ENST00000565634 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
UBFD1-204ENST00000565634 NPHP4O75161 1426 aaPredicted RBP9.9□□□□□ -0.83
UBFD1-204ENST00000565634 SPAG9O60271 1321 aaKnown RBP9.89□□□□□ -0.83
UBFD1-204ENST00000565634 FOXK1P85037 733 aa9.89□□□□□ -0.83
UBFD1-204ENST00000565634 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
UBFD1-204ENST00000565634 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
UBFD1-204ENST00000565634 CDK11AQ9UQ88 783 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-204ENST00000565634 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
UBFD1-204ENST00000565634 SRCAPQ6ZRS2 3230 aa9.89□□□□□ -0.83
UBFD1-204ENST00000565634 DSG2Q14126 1118 aa9.88□□□□□ -0.83
UBFD1-204ENST00000565634 ABCC1P33527 1531 aa9.87□□□□□ -0.83
UBFD1-204ENST00000565634 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-204ENST00000565634 THEMISQ8N1K5 641 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-204ENST00000565634 SAMD9LQ8IVG5 1584 aa9.87□□□□□ -0.83
UBFD1-204ENST00000565634 CDC42BPAQ5VT25 1732 aa9.87□□□□□ -0.83
UBFD1-204ENST00000565634 TNRQ92752 1358 aa9.87□□□□□ -0.83
UBFD1-204ENST00000565634 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
UBFD1-204ENST00000565634 PBX2P40425 430 aa9.86□□□□□ -0.83
UBFD1-204ENST00000565634 TROQ12816 1431 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-204ENST00000565634 RNF17Q9BXT8 1623 aaKnown RBP9.85□□□□□ -0.83
UBFD1-204ENST00000565634 PTGER2P43116 358 aa9.85□□□□□ -0.83
UBFD1-204ENST00000565634 PREX2Q70Z35 1606 aa9.84□□□□□ -0.83
UBFD1-204ENST00000565634 A2MP01023 1474 aa9.84□□□□□ -0.83
UBFD1-204ENST00000565634 ROBO1Q9Y6N7 1651 aa9.83□□□□□ -0.84
UBFD1-204ENST00000565634 KIF3BO15066 747 aa9.83□□□□□ -0.84
UBFD1-204ENST00000565634 MEX3CQ5U5Q3 659 aaKnown RBP9.83□□□□□ -0.84
UBFD1-204ENST00000565634 SYCP2Q9BX26 1530 aa9.82□□□□□ -0.84
UBFD1-204ENST00000565634 UGGT1Q9NYU2 1555 aa9.81□□□□□ -0.84
UBFD1-204ENST00000565634 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-204ENST00000565634 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-204ENST00000565634 RXRBP28702 533 aa9.81□□□□□ -0.84
UBFD1-204ENST00000565634 LTKP29376 864 aa9.81□□□□□ -0.84
UBFD1-204ENST00000565634 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-204ENST00000565634 PHLPP1O60346 1717 aa9.81□□□□□ -0.84
UBFD1-204ENST00000565634 ATP7AQ04656 1500 aa9.81□□□□□ -0.84
UBFD1-204ENST00000565634 CLIP1P30622 1438 aa9.81□□□□□ -0.84
UBFD1-204ENST00000565634 ZNF644Q9H582 1327 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-204ENST00000565634 FAM135BQ49AJ0 1406 aa9.8□□□□□ -0.84
UBFD1-204ENST00000565634 WASHC2CQ9Y4E1 1318 aa9.8□□□□□ -0.84
UBFD1-204ENST00000565634 MED14O60244 1454 aa9.79□□□□□ -0.84
UBFD1-204ENST00000565634 ARHGAP33O14559 1287 aa9.79□□□□□ -0.84
UBFD1-204ENST00000565634 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
UBFD1-204ENST00000565634 PROSER2Q86WR7 435 aaPredicted RBP9.79□□□□□ -0.84
UBFD1-204ENST00000565634 MIA2Q96PC5 1412 aa9.79□□□□□ -0.84
UBFD1-204ENST00000565634 DEPDC5O75140 1603 aa9.78□□□□□ -0.84
UBFD1-204ENST00000565634 FAM135AQ9P2D6 1515 aa9.78□□□□□ -0.84
UBFD1-204ENST00000565634 ZC3H13Q5T200 1668 aaKnown RBP9.78□□□□□ -0.84
UBFD1-204ENST00000565634 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
UBFD1-204ENST00000565634 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
UBFD1-204ENST00000565634 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
UBFD1-204ENST00000565634 LRP6O75581 1613 aa9.78□□□□□ -0.84
UBFD1-204ENST00000565634 PLXNC1O60486 1568 aa9.77□□□□□ -0.85
UBFD1-204ENST00000565634 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
UBFD1-204ENST00000565634 ARHGAP35Q9NRY4 1499 aa9.77□□□□□ -0.85
UBFD1-204ENST00000565634 TMEM94Q12767 1356 aa9.76□□□□□ -0.85
UBFD1-204ENST00000565634 SYNMO15061 1565 aa9.76□□□□□ -0.85
UBFD1-204ENST00000565634 SETBP1Q9Y6X0 1596 aa9.76□□□□□ -0.85
UBFD1-204ENST00000565634 TBC1D12O60347 775 aa9.76□□□□□ -0.85
UBFD1-204ENST00000565634 PSEN2P49810 448 aa9.76□□□□□ -0.85
UBFD1-204ENST00000565634 ZNF772Q68DY9 489 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-204ENST00000565634 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
UBFD1-204ENST00000565634 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
UBFD1-204ENST00000565634 CEP162Q5TB80 1403 aa9.75□□□□□ -0.85
UBFD1-204ENST00000565634 ADGBQ8N7X0 1667 aa9.75□□□□□ -0.85
UBFD1-204ENST00000565634 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-204ENST00000565634 SLC26A8Q96RN1 970 aa9.75□□□□□ -0.85
UBFD1-204ENST00000565634 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
UBFD1-204ENST00000565634 CFDP1Q9UEE9 299 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-204ENST00000565634 INO80Q9ULG1 1556 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-204ENST00000565634 BCANQ96GW7 911 aa9.74□□□□□ -0.85
UBFD1-204ENST00000565634 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
UBFD1-204ENST00000565634 JCADQ9P266 1359 aa9.74□□□□□ -0.85
UBFD1-204ENST00000565634 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
UBFD1-204ENST00000565634 PZPP20742 1482 aa9.73□□□□□ -0.85
UBFD1-204ENST00000565634 GPATCH8Q9UKJ3 1502 aaKnown RBP9.73□□□□□ -0.85
UBFD1-204ENST00000565634 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
UBFD1-204ENST00000565634 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
UBFD1-204ENST00000565634 AFF2P51816 1311 aa9.72□□□□□ -0.85
UBFD1-204ENST00000565634 TK2O00142 265 aa9.71□□□□□ -0.86
UBFD1-204ENST00000565634 HRO43593 1189 aa9.71□□□□□ -0.86
UBFD1-204ENST00000565634 QTRT2Q9H974 415 aaKnown RBP9.71□□□□□ -0.86
UBFD1-204ENST00000565634 DHX29Q7Z478 1369 aaKnown RBP9.71□□□□□ -0.86
UBFD1-204ENST00000565634 UBR1Q8IWV7 1749 aa9.7□□□□□ -0.86
UBFD1-204ENST00000565634 NLRP1Q9C000 1473 aa9.7□□□□□ -0.86
UBFD1-204ENST00000565634 KCNA6P17658 529 aa9.69□□□□□ -0.86
UBFD1-204ENST00000565634 PDE4AP27815 886 aa9.69□□□□□ -0.86
UBFD1-204ENST00000565634 COL16A1Q07092 1604 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-204ENST00000565634 SCAF11Q99590 1463 aaKnown RBP9.68□□□□□ -0.86
UBFD1-204ENST00000565634 VSIG10Q8N0Z9 540 aa9.68□□□□□ -0.86
UBFD1-204ENST00000565634 MAP3K1Q13233 1512 aa9.67□□□□□ -0.86
UBFD1-204ENST00000565634 KDM5DQ9BY66 1539 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms