RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRAPPC2L-210ENST00000565309 POGKQ9P215 609 aa18.74■□□□□ 0.59
TRAPPC2L-210ENST00000565309 SLAIN2Q9P270 581 aa18.74■□□□□ 0.59
TRAPPC2L-210ENST00000565309 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
TRAPPC2L-210ENST00000565309 DCCP43146 1447 aa18.74■□□□□ 0.59
TRAPPC2L-210ENST00000565309 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
TRAPPC2L-210ENST00000565309 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
TRAPPC2L-210ENST00000565309 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
TRAPPC2L-210ENST00000565309 MST1RQ04912 1400 aa18.67■□□□□ 0.58
TRAPPC2L-210ENST00000565309 RALGAPBQ86X10 1494 aa18.66■□□□□ 0.58
TRAPPC2L-210ENST00000565309 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
TRAPPC2L-210ENST00000565309 MINK1Q8N4C8 1332 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC2L-210ENST00000565309 ROBO1Q9Y6N7 1651 aa18.66■□□□□ 0.58
TRAPPC2L-210ENST00000565309 GPRASP1Q5JY77 1395 aa18.66■□□□□ 0.58
TRAPPC2L-210ENST00000565309 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC2L-210ENST00000565309 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
TRAPPC2L-210ENST00000565309 HSPA1LP34931 641 aa18.64■□□□□ 0.57
TRAPPC2L-210ENST00000565309 NUTM2FA1L443 756 aa18.63■□□□□ 0.57
TRAPPC2L-210ENST00000565309 C1orf167Q5SNV9 1468 aa18.63■□□□□ 0.57
TRAPPC2L-210ENST00000565309 BRINP3Q76B58 766 aa18.62■□□□□ 0.57
TRAPPC2L-210ENST00000565309 CENPJQ9HC77 1338 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC2L-210ENST00000565309 ADGRB2O60241 1585 aa18.6■□□□□ 0.57
TRAPPC2L-210ENST00000565309 ORAI2Q96SN7 254 aa18.6■□□□□ 0.57
TRAPPC2L-210ENST00000565309 FMN2Q9NZ56 1722 aa18.6■□□□□ 0.57
TRAPPC2L-210ENST00000565309 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
TRAPPC2L-210ENST00000565309 WASLO00401 505 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC2L-210ENST00000565309 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
TRAPPC2L-210ENST00000565309 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
TRAPPC2L-210ENST00000565309 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
TRAPPC2L-210ENST00000565309 DDX17Q92841 729 aaKnown RBP18.54■□□□□ 0.56
TRAPPC2L-210ENST00000565309 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
TRAPPC2L-210ENST00000565309 RGPD8O14715 1765 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC2L-210ENST00000565309 ANKARQ7Z5J8 1434 aa18.53■□□□□ 0.56
TRAPPC2L-210ENST00000565309 AHDC1Q5TGY3 1603 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC2L-210ENST00000565309 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
TRAPPC2L-210ENST00000565309 TULP4Q9NRJ4 1543 aa18.52■□□□□ 0.56
TRAPPC2L-210ENST00000565309 USP32Q8NFA0 1604 aa18.52■□□□□ 0.55
TRAPPC2L-210ENST00000565309 FOXO3O43524 673 aa18.51■□□□□ 0.55
TRAPPC2L-210ENST00000565309 NHSL1Q5SYE7 1610 aa18.5■□□□□ 0.55
TRAPPC2L-210ENST00000565309 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
TRAPPC2L-210ENST00000565309 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
TRAPPC2L-210ENST00000565309 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
TRAPPC2L-210ENST00000565309 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
TRAPPC2L-210ENST00000565309 USP47Q96K76 1375 aa18.5■□□□□ 0.55
TRAPPC2L-210ENST00000565309 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
TRAPPC2L-210ENST00000565309 COL16A1Q07092 1604 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC2L-210ENST00000565309 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
TRAPPC2L-210ENST00000565309 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
TRAPPC2L-210ENST00000565309 ATP7BP35670 1465 aa18.48■□□□□ 0.55
TRAPPC2L-210ENST00000565309 PMFBP1Q8TBY8 1022 aa18.48■□□□□ 0.55
TRAPPC2L-210ENST00000565309 SBNO2Q9Y2G9 1366 aa18.47■□□□□ 0.55
TRAPPC2L-210ENST00000565309 KIF1AQ12756 1690 aa18.47■□□□□ 0.55
TRAPPC2L-210ENST00000565309 XPCQ01831 940 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC2L-210ENST00000565309 SOS2Q07890 1332 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC2L-210ENST00000565309 TESK2Q96S53 571 aa18.45■□□□□ 0.54
TRAPPC2L-210ENST00000565309 CCDC61Q9Y6R9 512 aa18.45■□□□□ 0.54
TRAPPC2L-210ENST00000565309 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
TRAPPC2L-210ENST00000565309 JCADQ9P266 1359 aa18.43■□□□□ 0.54
TRAPPC2L-210ENST00000565309 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
TRAPPC2L-210ENST00000565309 KRT28Q7Z3Y7 464 aa18.43■□□□□ 0.54
TRAPPC2L-210ENST00000565309 NGDNQ8NEJ9 315 aaKnown RBP18.43■□□□□ 0.54
TRAPPC2L-210ENST00000565309 PXDNQ92626 1479 aa18.43■□□□□ 0.54
TRAPPC2L-210ENST00000565309 PSME1Q06323 249 aa18.42■□□□□ 0.54
TRAPPC2L-210ENST00000565309 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
TRAPPC2L-210ENST00000565309 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
TRAPPC2L-210ENST00000565309 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
TRAPPC2L-210ENST00000565309 SLC24A1O60721 1099 aa18.4■□□□□ 0.54
TRAPPC2L-210ENST00000565309 EIF4G2P78344 907 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRAPPC2L-210ENST00000565309 CABP1Q9NZU7 370 aa18.39■□□□□ 0.53
TRAPPC2L-210ENST00000565309 ACEP12821 1306 aa18.39■□□□□ 0.53
TRAPPC2L-210ENST00000565309 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
TRAPPC2L-210ENST00000565309 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
TRAPPC2L-210ENST00000565309 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
TRAPPC2L-210ENST00000565309 TMF1P82094 1093 aa18.37■□□□□ 0.53
TRAPPC2L-210ENST00000565309 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC2L-210ENST00000565309 SPATA31A3Q5VYP0 1347 aa18.36■□□□□ 0.53
TRAPPC2L-210ENST00000565309 PNPLA6Q8IY17 1366 aa18.36■□□□□ 0.53
TRAPPC2L-210ENST00000565309 DISP3Q9P2K9 1392 aa18.36■□□□□ 0.53
TRAPPC2L-210ENST00000565309 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
TRAPPC2L-210ENST00000565309 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
TRAPPC2L-210ENST00000565309 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
TRAPPC2L-210ENST00000565309 PAK3O75914 559 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC2L-210ENST00000565309 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
TRAPPC2L-210ENST00000565309 TNS3Q68CZ2 1445 aa18.33■□□□□ 0.53
TRAPPC2L-210ENST00000565309 NUTM2BA6NNL0 878 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC2L-210ENST00000565309 NUTM2EB1AL46 878 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC2L-210ENST00000565309 NUTM2AQ8IVF1 878 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC2L-210ENST00000565309 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
TRAPPC2L-210ENST00000565309 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC2L-210ENST00000565309 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC2L-210ENST00000565309 CDCA8Q53HL2 280 aa18.31■□□□□ 0.52
TRAPPC2L-210ENST00000565309 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
TRAPPC2L-210ENST00000565309 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
TRAPPC2L-210ENST00000565309 PLEKHG5O94827 1062 aa18.29■□□□□ 0.52
TRAPPC2L-210ENST00000565309 ZNF692Q9BU19 519 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC2L-210ENST00000565309 LRP6O75581 1613 aa18.29■□□□□ 0.52
TRAPPC2L-210ENST00000565309 COL22A1Q8NFW1 1626 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC2L-210ENST00000565309 USP6P35125 1406 aa18.28■□□□□ 0.52
TRAPPC2L-210ENST00000565309 CPSF1Q10570 1443 aaKnown RBP18.27■□□□□ 0.52
TRAPPC2L-210ENST00000565309 MEX3CQ5U5Q3 659 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms