RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 POGKQ9P215 609 aa17.5■□□□□ 0.39
NSMCE1-208ENST00000565070 QRICH2Q9H0J4 1663 aa17.5■□□□□ 0.39
NSMCE1-208ENST00000565070 SBNO2Q9Y2G9 1366 aa17.49■□□□□ 0.39
NSMCE1-208ENST00000565070 TESK2Q96S53 571 aa17.48■□□□□ 0.39
NSMCE1-208ENST00000565070 ROBO2Q9HCK4 1378 aa17.48■□□□□ 0.39
NSMCE1-208ENST00000565070 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
NSMCE1-208ENST00000565070 STRCP1A6NGW2 1772 aa17.45■□□□□ 0.38
NSMCE1-208ENST00000565070 WAPLQ7Z5K2 1190 aa17.43■□□□□ 0.38
NSMCE1-208ENST00000565070 NCOA3Q9Y6Q9 1424 aa17.43■□□□□ 0.38
NSMCE1-208ENST00000565070 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
NSMCE1-208ENST00000565070 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
NSMCE1-208ENST00000565070 TMF1P82094 1093 aa17.42■□□□□ 0.38
NSMCE1-208ENST00000565070 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
NSMCE1-208ENST00000565070 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
NSMCE1-208ENST00000565070 ADGRB2O60241 1585 aa17.42■□□□□ 0.38
NSMCE1-208ENST00000565070 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
NSMCE1-208ENST00000565070 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
NSMCE1-208ENST00000565070 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
NSMCE1-208ENST00000565070 EVC2Q86UK5 1308 aa17.4■□□□□ 0.38
NSMCE1-208ENST00000565070 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.4■□□□□ 0.38
NSMCE1-208ENST00000565070 MINK1Q8N4C8 1332 aaPredicted RBP17.39■□□□□ 0.37
NSMCE1-208ENST00000565070 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
NSMCE1-208ENST00000565070 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
NSMCE1-208ENST00000565070 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
NSMCE1-208ENST00000565070 TMEM94Q12767 1356 aa17.37■□□□□ 0.37
NSMCE1-208ENST00000565070 LRRC7Q96NW7 1537 aa17.37■□□□□ 0.37
NSMCE1-208ENST00000565070 C14orf37Q86TY3 774 aa17.37■□□□□ 0.37
NSMCE1-208ENST00000565070 TULP4Q9NRJ4 1543 aa17.36■□□□□ 0.37
NSMCE1-208ENST00000565070 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
NSMCE1-208ENST00000565070 PUS7Q96PZ0 661 aaKnown RBP17.36■□□□□ 0.37
NSMCE1-208ENST00000565070 LTBP4Q8N2S1 1624 aa17.35■□□□□ 0.37
NSMCE1-208ENST00000565070 XIRP1Q702N8 1843 aaKnown RBP17.34■□□□□ 0.37
NSMCE1-208ENST00000565070 WASLO00401 505 aaPredicted RBP17.34■□□□□ 0.37
NSMCE1-208ENST00000565070 DCCP43146 1447 aa17.34■□□□□ 0.37
NSMCE1-208ENST00000565070 C19orf44Q9H6X5 657 aa17.33■□□□□ 0.37
NSMCE1-208ENST00000565070 MSH6P52701 1360 aa17.33■□□□□ 0.36
NSMCE1-208ENST00000565070 CDK19Q9BWU1 502 aa17.32■□□□□ 0.36
NSMCE1-208ENST00000565070 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
NSMCE1-208ENST00000565070 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
NSMCE1-208ENST00000565070 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
NSMCE1-208ENST00000565070 MYOM1P52179 1685 aa17.31■□□□□ 0.36
NSMCE1-208ENST00000565070 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
NSMCE1-208ENST00000565070 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
NSMCE1-208ENST00000565070 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
NSMCE1-208ENST00000565070 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
NSMCE1-208ENST00000565070 ATF3P18847 181 aa17.29■□□□□ 0.36
NSMCE1-208ENST00000565070 ITSN1Q15811 1721 aa17.28■□□□□ 0.36
NSMCE1-208ENST00000565070 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
NSMCE1-208ENST00000565070 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
NSMCE1-208ENST00000565070 ATP7BP35670 1465 aa17.26■□□□□ 0.35
NSMCE1-208ENST00000565070 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
NSMCE1-208ENST00000565070 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
NSMCE1-208ENST00000565070 TOPAZ1Q8N9V7 1692 aa17.25■□□□□ 0.35
NSMCE1-208ENST00000565070 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
NSMCE1-208ENST00000565070 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
NSMCE1-208ENST00000565070 USP32Q8NFA0 1604 aa17.24■□□□□ 0.35
NSMCE1-208ENST00000565070 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
NSMCE1-208ENST00000565070 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
NSMCE1-208ENST00000565070 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
NSMCE1-208ENST00000565070 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
NSMCE1-208ENST00000565070 MST1RQ04912 1400 aa17.21■□□□□ 0.35
NSMCE1-208ENST00000565070 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
NSMCE1-208ENST00000565070 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.35
NSMCE1-208ENST00000565070 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
NSMCE1-208ENST00000565070 C1orf167Q5SNV9 1468 aa17.2■□□□□ 0.34
NSMCE1-208ENST00000565070 NUTM2FA1L443 756 aa17.2■□□□□ 0.34
NSMCE1-208ENST00000565070 KIF1AQ12756 1690 aa17.2■□□□□ 0.34
NSMCE1-208ENST00000565070 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
NSMCE1-208ENST00000565070 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
NSMCE1-208ENST00000565070 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
NSMCE1-208ENST00000565070 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
NSMCE1-208ENST00000565070 RALBP1Q15311 655 aa17.17■□□□□ 0.34
NSMCE1-208ENST00000565070 HDGFL2Q7Z4V5 671 aaPredicted RBP17.17■□□□□ 0.34
NSMCE1-208ENST00000565070 SLC12A5Q9H2X9 1139 aa17.17■□□□□ 0.34
NSMCE1-208ENST00000565070 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
NSMCE1-208ENST00000565070 PANK3Q9H999 370 aa17.16■□□□□ 0.34
NSMCE1-208ENST00000565070 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
NSMCE1-208ENST00000565070 AKAP12Q02952 1782 aa17.16■□□□□ 0.34
NSMCE1-208ENST00000565070 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
NSMCE1-208ENST00000565070 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
NSMCE1-208ENST00000565070 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
NSMCE1-208ENST00000565070 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
NSMCE1-208ENST00000565070 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.34
NSMCE1-208ENST00000565070 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.34
NSMCE1-208ENST00000565070 TOM1O60784 492 aa17.14■□□□□ 0.33
NSMCE1-208ENST00000565070 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
NSMCE1-208ENST00000565070 MYBBP1AQ9BQG0 1328 aaKnown RBP17.13■□□□□ 0.33
NSMCE1-208ENST00000565070 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
NSMCE1-208ENST00000565070 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
NSMCE1-208ENST00000565070 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
NSMCE1-208ENST00000565070 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
NSMCE1-208ENST00000565070 ACEP12821 1306 aa17.12■□□□□ 0.33
NSMCE1-208ENST00000565070 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
NSMCE1-208ENST00000565070 ORAI2Q96SN7 254 aa17.12■□□□□ 0.33
NSMCE1-208ENST00000565070 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
NSMCE1-208ENST00000565070 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
NSMCE1-208ENST00000565070 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
NSMCE1-208ENST00000565070 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
NSMCE1-208ENST00000565070 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
NSMCE1-208ENST00000565070 USP6P35125 1406 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms