RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 PANK3Q9H999 370 aa15.47■□□□□ 0.07
SNX29-204ENST00000564791 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
SNX29-204ENST00000564791 PRKRIP1Q9H875 184 aaPredicted RBP15.46■□□□□ 0.06
SNX29-204ENST00000564791 PIK3R4Q99570 1358 aa15.45■□□□□ 0.06
SNX29-204ENST00000564791 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
SNX29-204ENST00000564791 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.45■□□□□ 0.06
SNX29-204ENST00000564791 PUS7Q96PZ0 661 aaKnown RBP15.45■□□□□ 0.06
SNX29-204ENST00000564791 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
SNX29-204ENST00000564791 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
SNX29-204ENST00000564791 AMOTL2Q9Y2J4 779 aa15.44■□□□□ 0.06
SNX29-204ENST00000564791 ADGRB2O60241 1585 aa15.43■□□□□ 0.06
SNX29-204ENST00000564791 CCER2I3L3R5 266 aa15.43■□□□□ 0.06
SNX29-204ENST00000564791 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
SNX29-204ENST00000564791 LMTK3Q96Q04 1460 aa15.42■□□□□ 0.06
SNX29-204ENST00000564791 SRPK2P78362 688 aaKnown RBP15.42■□□□□ 0.06
SNX29-204ENST00000564791 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
SNX29-204ENST00000564791 TMC1Q8TDI8 760 aa15.41■□□□□ 0.06
SNX29-204ENST00000564791 CDK19Q9BWU1 502 aa15.41■□□□□ 0.06
SNX29-204ENST00000564791 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
SNX29-204ENST00000564791 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
SNX29-204ENST00000564791 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
SNX29-204ENST00000564791 NINLQ9Y2I6 1382 aa15.39■□□□□ 0.05
SNX29-204ENST00000564791 KCNA6P17658 529 aa15.39■□□□□ 0.05
SNX29-204ENST00000564791 HSPA2P54652 639 aa15.39■□□□□ 0.05
SNX29-204ENST00000564791 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
SNX29-204ENST00000564791 KNSTRNQ9Y448 316 aa15.38■□□□□ 0.05
SNX29-204ENST00000564791 NWD1Q149M9 1564 aa15.38■□□□□ 0.05
SNX29-204ENST00000564791 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
SNX29-204ENST00000564791 STRCQ7RTU9 1775 aa15.36■□□□□ 0.05
SNX29-204ENST00000564791 CARD14Q9BXL6 1004 aa15.36■□□□□ 0.05
SNX29-204ENST00000564791 NSD3Q9BZ95 1437 aa15.36■□□□□ 0.05
SNX29-204ENST00000564791 USP32Q8NFA0 1604 aa15.36■□□□□ 0.05
SNX29-204ENST00000564791 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
SNX29-204ENST00000564791 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
SNX29-204ENST00000564791 CC2D1BQ5T0F9 858 aaKnown RBP15.35■□□□□ 0.05
SNX29-204ENST00000564791 NALCNQ8IZF0 1738 aa15.35■□□□□ 0.05
SNX29-204ENST00000564791 TOPAZ1Q8N9V7 1692 aa15.35■□□□□ 0.05
SNX29-204ENST00000564791 RALBP1Q15311 655 aa15.35■□□□□ 0.05
SNX29-204ENST00000564791 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
SNX29-204ENST00000564791 ATP7BP35670 1465 aa15.34■□□□□ 0.05
SNX29-204ENST00000564791 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
SNX29-204ENST00000564791 A0A1W2PP64 1363 aa15.34■□□□□ 0.05
SNX29-204ENST00000564791 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
SNX29-204ENST00000564791 CCDC184Q52MB2 194 aa15.33■□□□□ 0.04
SNX29-204ENST00000564791 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
SNX29-204ENST00000564791 PPIP5K1Q6PFW1 1433 aa15.32■□□□□ 0.04
SNX29-204ENST00000564791 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
SNX29-204ENST00000564791 NUDT16Q96DE0 195 aaKnown RBP15.32■□□□□ 0.04
SNX29-204ENST00000564791 CABP1Q9NZU7 370 aa15.32■□□□□ 0.04
SNX29-204ENST00000564791 STRCP1A6NGW2 1772 aa15.31■□□□□ 0.04
SNX29-204ENST00000564791 PRR36Q9H6K5 1346 aa15.31■□□□□ 0.04
SNX29-204ENST00000564791 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
SNX29-204ENST00000564791 CDC42BPGQ6DT37 1551 aa15.31■□□□□ 0.04
SNX29-204ENST00000564791 RGPD8O14715 1765 aaPredicted RBP15.3■□□□□ 0.04
SNX29-204ENST00000564791 AKAP12Q02952 1782 aa15.3■□□□□ 0.04
SNX29-204ENST00000564791 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
SNX29-204ENST00000564791 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
SNX29-204ENST00000564791 NKTRP30414 1462 aaKnown RBP15.29■□□□□ 0.04
SNX29-204ENST00000564791 MON2Q7Z3U7 1717 aa15.29■□□□□ 0.04
SNX29-204ENST00000564791 HDGFL2Q7Z4V5 671 aaPredicted RBP15.28■□□□□ 0.04
SNX29-204ENST00000564791 KIF20BQ96Q89 1820 aa15.28■□□□□ 0.04
SNX29-204ENST00000564791 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
SNX29-204ENST00000564791 ADGRL3Q9HAR2 1447 aa15.28■□□□□ 0.04
SNX29-204ENST00000564791 ANKRD26Q9UPS8 1709 aa15.28■□□□□ 0.04
SNX29-204ENST00000564791 BRD4O60885 1362 aaPredicted RBP15.27■□□□□ 0.04
SNX29-204ENST00000564791 CPSF1Q10570 1443 aaKnown RBP15.27■□□□□ 0.03
SNX29-204ENST00000564791 NUTM2FA1L443 756 aa15.27■□□□□ 0.03
SNX29-204ENST00000564791 RBM33Q96EV2 1170 aaKnown RBP15.27■□□□□ 0.03
SNX29-204ENST00000564791 CGNL1Q0VF96 1302 aa15.27■□□□□ 0.03
SNX29-204ENST00000564791 ANKARQ7Z5J8 1434 aa15.26■□□□□ 0.03
SNX29-204ENST00000564791 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
SNX29-204ENST00000564791 NSD2O96028 1365 aa15.25■□□□□ 0.03
SNX29-204ENST00000564791 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
SNX29-204ENST00000564791 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
SNX29-204ENST00000564791 PPP2R1AP30153 589 aa15.23■□□□□ 0.03
SNX29-204ENST00000564791 EDC4Q6P2E9 1401 aaKnown RBP15.23■□□□□ 0.03
SNX29-204ENST00000564791 PLEKHG3A1L390 1219 aa15.22■□□□□ 0.03
SNX29-204ENST00000564791 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
SNX29-204ENST00000564791 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
SNX29-204ENST00000564791 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.02
SNX29-204ENST00000564791 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.02
SNX29-204ENST00000564791 ACEP12821 1306 aa15.2■□□□□ 0.02
SNX29-204ENST00000564791 TMEM94Q12767 1356 aa15.19■□□□□ 0.02
SNX29-204ENST00000564791 FYB1O15117 783 aa15.19■□□□□ 0.02
SNX29-204ENST00000564791 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.02
SNX29-204ENST00000564791 GGNBP2Q9H3C7 697 aa15.19■□□□□ 0.02
SNX29-204ENST00000564791 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
SNX29-204ENST00000564791 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
SNX29-204ENST00000564791 USP6P35125 1406 aa15.18■□□□□ 0.02
SNX29-204ENST00000564791 POLR3AO14802 1390 aaPredicted RBP15.18■□□□□ 0.02
SNX29-204ENST00000564791 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
SNX29-204ENST00000564791 NCOA3Q9Y6Q9 1424 aa15.17■□□□□ 0.02
SNX29-204ENST00000564791 CENPBP07199 599 aaPredicted RBP15.17■□□□□ 0.02
SNX29-204ENST00000564791 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
SNX29-204ENST00000564791 ZNF335Q9H4Z2 1342 aaPredicted RBP15.16■□□□□ 0.02
SNX29-204ENST00000564791 SSH2Q76I76 1423 aa15.15■□□□□ 0.02
SNX29-204ENST00000564791 LRRC7Q96NW7 1537 aa15.15■□□□□ 0.02
SNX29-204ENST00000564791 NME9Q86XW9 330 aa15.14■□□□□ 0.01
SNX29-204ENST00000564791 NGDNQ8NEJ9 315 aaKnown RBP15.14■□□□□ 0.01
SNX29-204ENST00000564791 C19orf44Q9H6X5 657 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 900.8 ms