RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PRAG1Q86YV5 1406 aa14.35□□□□□ -0.11
CDH1-206ENST00000564676 LAMC1P11047 1609 aa14.34□□□□□ -0.11
CDH1-206ENST00000564676 DCCP43146 1447 aa14.34□□□□□ -0.11
CDH1-206ENST00000564676 L3MBTL2Q969R5 705 aa14.34□□□□□ -0.11
CDH1-206ENST00000564676 TECPR2O15040 1411 aa14.33□□□□□ -0.11
CDH1-206ENST00000564676 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
CDH1-206ENST00000564676 SIRT1Q96EB6 747 aa14.33□□□□□ -0.12
CDH1-206ENST00000564676 POGKQ9P215 609 aa14.32□□□□□ -0.12
CDH1-206ENST00000564676 TRAK1Q9UPV9 953 aa14.32□□□□□ -0.12
CDH1-206ENST00000564676 PLEKHH1Q9ULM0 1364 aa14.32□□□□□ -0.12
CDH1-206ENST00000564676 NALCNQ8IZF0 1738 aa14.32□□□□□ -0.12
CDH1-206ENST00000564676 SAFB2Q14151 953 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDH1-206ENST00000564676 MST1RQ04912 1400 aa14.31□□□□□ -0.12
CDH1-206ENST00000564676 KNDC1Q76NI1 1749 aa14.3□□□□□ -0.12
CDH1-206ENST00000564676 BRINP3Q76B58 766 aa14.3□□□□□ -0.12
CDH1-206ENST00000564676 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
CDH1-206ENST00000564676 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
CDH1-206ENST00000564676 C1orf167Q5SNV9 1468 aa14.27□□□□□ -0.12
CDH1-206ENST00000564676 NUTM2FA1L443 756 aa14.27□□□□□ -0.13
CDH1-206ENST00000564676 NBPF1Q3BBV0 1214 aa14.27□□□□□ -0.13
CDH1-206ENST00000564676 DLC1Q96QB1 1528 aa14.26□□□□□ -0.13
CDH1-206ENST00000564676 DISP3Q9P2K9 1392 aa14.26□□□□□ -0.13
CDH1-206ENST00000564676 PHLPP1O60346 1717 aa14.26□□□□□ -0.13
CDH1-206ENST00000564676 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
CDH1-206ENST00000564676 ESCO1Q5FWF5 840 aa14.25□□□□□ -0.13
CDH1-206ENST00000564676 ORAI2Q96SN7 254 aa14.25□□□□□ -0.13
CDH1-206ENST00000564676 MINK1Q8N4C8 1332 aaPredicted RBP14.24□□□□□ -0.13
CDH1-206ENST00000564676 DDX17Q92841 729 aaKnown RBP14.24□□□□□ -0.13
CDH1-206ENST00000564676 CDC42BPGQ6DT37 1551 aa14.24□□□□□ -0.13
CDH1-206ENST00000564676 KIAA1210Q9ULL0 1709 aa14.24□□□□□ -0.13
CDH1-206ENST00000564676 HIRIP3Q9BW71 556 aaPredicted RBP14.23□□□□□ -0.13
CDH1-206ENST00000564676 JCADQ9P266 1359 aa14.22□□□□□ -0.13
CDH1-206ENST00000564676 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
CDH1-206ENST00000564676 NBPF8Q3BBV2 869 aa14.2□□□□□ -0.14
CDH1-206ENST00000564676 LRRC59Q96AG4 307 aaKnown RBP14.2□□□□□ -0.14
CDH1-206ENST00000564676 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
CDH1-206ENST00000564676 MED1Q15648 1581 aaPredicted RBP14.19□□□□□ -0.14
CDH1-206ENST00000564676 ROCK2O75116 1388 aaKnown RBP14.19□□□□□ -0.14
CDH1-206ENST00000564676 WASLO00401 505 aaPredicted RBP14.18□□□□□ -0.14
CDH1-206ENST00000564676 FOXO3O43524 673 aa14.18□□□□□ -0.14
CDH1-206ENST00000564676 KCNA4P22459 653 aa14.18□□□□□ -0.14
CDH1-206ENST00000564676 NHSL1Q5SYE7 1610 aa14.18□□□□□ -0.14
CDH1-206ENST00000564676 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
CDH1-206ENST00000564676 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
CDH1-206ENST00000564676 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
CDH1-206ENST00000564676 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
CDH1-206ENST00000564676 PHF8Q9UPP1 1060 aa14.17□□□□□ -0.14
CDH1-206ENST00000564676 SOS2Q07890 1332 aaPredicted RBP14.16□□□□□ -0.14
CDH1-206ENST00000564676 CENPJQ9HC77 1338 aaPredicted RBP14.16□□□□□ -0.14
CDH1-206ENST00000564676 XPCQ01831 940 aaPredicted RBP14.16□□□□□ -0.14
CDH1-206ENST00000564676 EIF3AQ14152 1382 aaKnown RBP14.16□□□□□ -0.14
CDH1-206ENST00000564676 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.14
CDH1-206ENST00000564676 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.14
CDH1-206ENST00000564676 TRPM1Q7Z4N2 1603 aa14.15□□□□□ -0.14
CDH1-206ENST00000564676 ADGRB2O60241 1585 aa14.15□□□□□ -0.14
CDH1-206ENST00000564676 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
CDH1-206ENST00000564676 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
CDH1-206ENST00000564676 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
CDH1-206ENST00000564676 RGPD8O14715 1765 aaPredicted RBP14.14□□□□□ -0.15
CDH1-206ENST00000564676 MEX3CQ5U5Q3 659 aaKnown RBP14.14□□□□□ -0.15
CDH1-206ENST00000564676 PMFBP1Q8TBY8 1022 aa14.14□□□□□ -0.15
CDH1-206ENST00000564676 CDK19Q9BWU1 502 aa14.14□□□□□ -0.15
CDH1-206ENST00000564676 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
CDH1-206ENST00000564676 ANKARQ7Z5J8 1434 aa14.14□□□□□ -0.15
CDH1-206ENST00000564676 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
CDH1-206ENST00000564676 PRR36Q9H6K5 1346 aa14.13□□□□□ -0.15
CDH1-206ENST00000564676 PSME1Q06323 249 aa14.12□□□□□ -0.15
CDH1-206ENST00000564676 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
CDH1-206ENST00000564676 PNPLA6Q8IY17 1366 aa14.11□□□□□ -0.15
CDH1-206ENST00000564676 TULP4Q9NRJ4 1543 aa14.11□□□□□ -0.15
CDH1-206ENST00000564676 KIF1AQ12756 1690 aa14.11□□□□□ -0.15
CDH1-206ENST00000564676 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
CDH1-206ENST00000564676 SRPK2P78362 688 aaKnown RBP14.11□□□□□ -0.15
CDH1-206ENST00000564676 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
CDH1-206ENST00000564676 NGDNQ8NEJ9 315 aaKnown RBP14.1□□□□□ -0.15
CDH1-206ENST00000564676 TIMELESSQ9UNS1 1208 aa14.1□□□□□ -0.15
CDH1-206ENST00000564676 USP32Q8NFA0 1604 aa14.09□□□□□ -0.15
CDH1-206ENST00000564676 CCDC61Q9Y6R9 512 aa14.09□□□□□ -0.15
CDH1-206ENST00000564676 RALGAPBQ86X10 1494 aa14.09□□□□□ -0.15
CDH1-206ENST00000564676 PXDNQ92626 1479 aa14.09□□□□□ -0.15
CDH1-206ENST00000564676 LMOD2Q6P5Q4 547 aa14.08□□□□□ -0.16
CDH1-206ENST00000564676 ILDR2Q71H61 639 aa14.08□□□□□ -0.16
CDH1-206ENST00000564676 CABP2Q9NPB3 220 aa14.08□□□□□ -0.16
CDH1-206ENST00000564676 EVC2Q86UK5 1308 aa14.08□□□□□ -0.16
CDH1-206ENST00000564676 LRP6O75581 1613 aa14.08□□□□□ -0.16
CDH1-206ENST00000564676 QRICH2Q9H0J4 1663 aa14.07□□□□□ -0.16
CDH1-206ENST00000564676 ADAMTS2O95450 1211 aa14.07□□□□□ -0.16
CDH1-206ENST00000564676 SPATA31A3Q5VYP0 1347 aa14.07□□□□□ -0.16
CDH1-206ENST00000564676 RGS17Q9UGC6 210 aaPredicted RBP14.06□□□□□ -0.16
CDH1-206ENST00000564676 SBNO1A3KN83 1393 aa14.06□□□□□ -0.16
CDH1-206ENST00000564676 ATP7BP35670 1465 aa14.06□□□□□ -0.16
CDH1-206ENST00000564676 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
CDH1-206ENST00000564676 C8orf37Q96NL8 207 aa14.05□□□□□ -0.16
CDH1-206ENST00000564676 PLEKHG3A1L390 1219 aa14.04□□□□□ -0.16
CDH1-206ENST00000564676 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
CDH1-206ENST00000564676 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
CDH1-206ENST00000564676 HAP1P54257 671 aaPredicted RBP14.03□□□□□ -0.16
CDH1-206ENST00000564676 ZNF772Q68DY9 489 aaPredicted RBP14.03□□□□□ -0.16
CDH1-206ENST00000564676 ACEP12821 1306 aa14.03□□□□□ -0.16
CDH1-206ENST00000564676 TNS3Q68CZ2 1445 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms