RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 COL22A1Q8NFW1 1626 aaPredicted RBP28.07■■■□□ 2.08
NME3-207ENST00000564628 NPHP3Q7Z494 1330 aa28.03■■■□□ 2.08
NME3-207ENST00000564628 FNBP4Q8N3X1 1017 aaPredicted RBP28.03■■■□□ 2.08
NME3-207ENST00000564628 CCDC144AA2RUR9 1427 aa28.02■■■□□ 2.08
NME3-207ENST00000564628 TECPR2O15040 1411 aa28.02■■■□□ 2.08
NME3-207ENST00000564628 USP21Q9UK80 565 aa28.02■■■□□ 2.08
NME3-207ENST00000564628 ADGRF5Q8IZF2 1346 aa28.01■■■□□ 2.07
NME3-207ENST00000564628 HRCP23327 699 aa28.01■■■□□ 2.07
NME3-207ENST00000564628 MPHOSPH9Q99550 1183 aa28.01■■■□□ 2.07
NME3-207ENST00000564628 TRPC5Q9UL62 973 aaPredicted RBP28.01■■■□□ 2.07
NME3-207ENST00000564628 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.07
NME3-207ENST00000564628 ESCO1Q5FWF5 840 aa28■■■□□ 2.07
NME3-207ENST00000564628 MYOM2P54296 1465 aa28■■■□□ 2.07
NME3-207ENST00000564628 PXDNQ92626 1479 aa28■■■□□ 2.07
NME3-207ENST00000564628 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
NME3-207ENST00000564628 FOXD1Q16676 465 aa27.99■■■□□ 2.07
NME3-207ENST00000564628 IFT172Q9UG01 1749 aa27.98■■■□□ 2.07
NME3-207ENST00000564628 LRPPRCP42704 1394 aaKnown RBP27.98■■■□□ 2.07
NME3-207ENST00000564628 ATRNO75882 1429 aa27.96■■■□□ 2.07
NME3-207ENST00000564628 ATAD2Q6PL18 1390 aa27.96■■■□□ 2.07
NME3-207ENST00000564628 ABCC11Q96J66 1382 aa27.96■■■□□ 2.07
NME3-207ENST00000564628 KNDC1Q76NI1 1749 aa27.94■■■□□ 2.06
NME3-207ENST00000564628 FOXO3O43524 673 aa27.93■■■□□ 2.06
NME3-207ENST00000564628 RGL3Q3MIN7 710 aa27.93■■■□□ 2.06
NME3-207ENST00000564628 PIK3C2GO75747 1445 aa27.92■■■□□ 2.06
NME3-207ENST00000564628 WAPLQ7Z5K2 1190 aa27.92■■■□□ 2.06
NME3-207ENST00000564628 STK26Q9P289 416 aa27.92■■■□□ 2.06
NME3-207ENST00000564628 MARF1Q9Y4F3 1742 aaKnown RBP27.91■■■□□ 2.06
NME3-207ENST00000564628 BCL9LQ86UU0 1499 aa27.9■■■□□ 2.06
NME3-207ENST00000564628 PLEKHH1Q9ULM0 1364 aa27.87■■■□□ 2.05
NME3-207ENST00000564628 FMN2Q9NZ56 1722 aa27.87■■■□□ 2.05
NME3-207ENST00000564628 XPCQ01831 940 aaPredicted RBP27.87■■■□□ 2.05
NME3-207ENST00000564628 TMEM132EQ6IEE7 984 aa27.87■■■□□ 2.05
NME3-207ENST00000564628 YTHDC2Q9H6S0 1430 aaKnown RBP27.86■■■□□ 2.05
NME3-207ENST00000564628 SIRT1Q96EB6 747 aa27.86■■■□□ 2.05
NME3-207ENST00000564628 KIF1AQ12756 1690 aa27.86■■■□□ 2.05
NME3-207ENST00000564628 NUTM2FA1L443 756 aa27.85■■■□□ 2.05
NME3-207ENST00000564628 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.82■■■□□ 2.04
NME3-207ENST00000564628 SPATA31A3Q5VYP0 1347 aa27.82■■■□□ 2.04
NME3-207ENST00000564628 GJD4Q96KN9 370 aaPredicted RBP27.81■■■□□ 2.04
NME3-207ENST00000564628 C14orf93Q9H972 538 aaKnown RBP27.8■■■□□ 2.04
NME3-207ENST00000564628 NRXN1Q9ULB1 1477 aa27.8■■■□□ 2.04
NME3-207ENST00000564628 CCDC125Q86Z20 511 aa27.79■■■□□ 2.04
NME3-207ENST00000564628 SLIT2O94813 1529 aa27.78■■■□□ 2.04
NME3-207ENST00000564628 KRT28Q7Z3Y7 464 aa27.76■■■□□ 2.03
NME3-207ENST00000564628 UNC5CLQ8IV45 518 aa27.76■■■□□ 2.03
NME3-207ENST00000564628 USP32Q8NFA0 1604 aa27.75■■■□□ 2.03
NME3-207ENST00000564628 TRIM26Q12899 539 aaPredicted RBP27.75■■■□□ 2.03
NME3-207ENST00000564628 DHX57Q6P158 1386 aaKnown RBP27.74■■■□□ 2.03
NME3-207ENST00000564628 EP400Q96L91 3159 aa27.74■■■□□ 2.03
NME3-207ENST00000564628 PHF8Q9UPP1 1060 aa27.73■■■□□ 2.03
NME3-207ENST00000564628 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
NME3-207ENST00000564628 RALGAPBQ86X10 1494 aa27.72■■■□□ 2.03
NME3-207ENST00000564628 PSME1Q06323 249 aa27.72■■■□□ 2.03
NME3-207ENST00000564628 GLI3P10071 1580 aa27.71■■■□□ 2.03
NME3-207ENST00000564628 CFAP70Q5T0N1 1121 aa27.71■■■□□ 2.03
NME3-207ENST00000564628 ZRANB1Q9UGI0 708 aa27.7■■■□□ 2.02
NME3-207ENST00000564628 RGPD8O14715 1765 aaPredicted RBP27.7■■■□□ 2.02
NME3-207ENST00000564628 SBNO1A3KN83 1393 aa27.69■■■□□ 2.02
NME3-207ENST00000564628 DLC1Q96QB1 1528 aa27.68■■■□□ 2.02
NME3-207ENST00000564628 PRAM1Q96QH2 718 aa27.67■■■□□ 2.02
NME3-207ENST00000564628 SRCAPQ6ZRS2 3230 aa27.65■■■□□ 2.02
NME3-207ENST00000564628 ARHGEF10O15013 1369 aa27.65■■■□□ 2.02
NME3-207ENST00000564628 HAP1P54257 671 aaPredicted RBP27.65■■■□□ 2.02
NME3-207ENST00000564628 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
NME3-207ENST00000564628 NWD2Q9ULI1 1742 aa27.64■■■□□ 2.02
NME3-207ENST00000564628 ADGRB2O60241 1585 aa27.64■■■□□ 2.01
NME3-207ENST00000564628 VPS72Q15906 364 aa27.63■■■□□ 2.01
NME3-207ENST00000564628 BLMP54132 1417 aaPredicted RBP27.63■■■□□ 2.01
NME3-207ENST00000564628 ABCA3Q99758 1704 aa27.62■■■□□ 2.01
NME3-207ENST00000564628 SAFB2Q14151 953 aaKnown RBP eCLIP27.61■■■□□ 2.01
NME3-207ENST00000564628 CABLES1Q8TDN4 633 aa27.61■■■□□ 2.01
NME3-207ENST00000564628 POGKQ9P215 609 aa27.61■■■□□ 2.01
NME3-207ENST00000564628 PLCH1Q4KWH8 1693 aa27.61■■■□□ 2.01
NME3-207ENST00000564628 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
NME3-207ENST00000564628 ONECUT3O60422 494 aaPredicted RBP27.59■■■□□ 2.01
NME3-207ENST00000564628 BRWD3Q6RI45 1802 aa27.59■■■□□ 2.01
NME3-207ENST00000564628 SEPT12Q8IYM1 358 aa27.58■■■□□ 2.01
NME3-207ENST00000564628 LMOD2Q6P5Q4 547 aa27.57■■■□□ 2
NME3-207ENST00000564628 PMFBP1Q8TBY8 1022 aa27.55■■■□□ 2
NME3-207ENST00000564628 EIF3AQ14152 1382 aaKnown RBP27.55■■■□□ 2
NME3-207ENST00000564628 TRPM3Q9HCF6 1732 aaPredicted RBP27.53■■■□□ 2
NME3-207ENST00000564628 FAM83GA6ND36 823 aa27.52■■■□□ 2
NME3-207ENST00000564628 CCDC9Q9Y3X0 531 aaKnown RBP27.52■■■□□ 2
NME3-207ENST00000564628 PLEKHG5O94827 1062 aa27.51■■□□□ 1.99
NME3-207ENST00000564628 TULP4Q9NRJ4 1543 aa27.51■■□□□ 1.99
NME3-207ENST00000564628 GPRASP1Q5JY77 1395 aa27.5■■□□□ 1.99
NME3-207ENST00000564628 ALS2Q96Q42 1657 aa27.5■■□□□ 1.99
NME3-207ENST00000564628 SF3B2Q13435 895 aaKnown RBP27.5■■□□□ 1.99
NME3-207ENST00000564628 STAC3Q96MF2 364 aa27.5■■□□□ 1.99
NME3-207ENST00000564628 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
NME3-207ENST00000564628 KRT27Q7Z3Y8 459 aa27.49■■□□□ 1.99
NME3-207ENST00000564628 NRAPQ86VF7 1730 aa27.49■■□□□ 1.99
NME3-207ENST00000564628 HIRIP3Q9BW71 556 aaPredicted RBP27.48■■□□□ 1.99
NME3-207ENST00000564628 PRR36Q9H6K5 1346 aa27.47■■□□□ 1.99
NME3-207ENST00000564628 DEFB132Q7Z7B7 95 aa27.47■■□□□ 1.99
NME3-207ENST00000564628 MINK1Q8N4C8 1332 aaPredicted RBP27.46■■□□□ 1.99
NME3-207ENST00000564628 COL14A1Q05707 1796 aaKnown RBP27.46■■□□□ 1.99
NME3-207ENST00000564628 WASLO00401 505 aaPredicted RBP27.46■■□□□ 1.99
NME3-207ENST00000564628 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms