RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 KIF3BO15066 747 aa9.89□□□□□ -0.83
ATXN3-249ENST00000564606 PDE3AQ14432 1141 aa9.89□□□□□ -0.83
ATXN3-249ENST00000564606 INO80Q9ULG1 1556 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-249ENST00000564606 SETBP1Q9Y6X0 1596 aa9.88□□□□□ -0.83
ATXN3-249ENST00000564606 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-249ENST00000564606 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
ATXN3-249ENST00000564606 ADAMTS8Q9UP79 889 aa9.88□□□□□ -0.83
ATXN3-249ENST00000564606 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-249ENST00000564606 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
ATXN3-249ENST00000564606 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
ATXN3-249ENST00000564606 NKTRP30414 1462 aaKnown RBP9.87□□□□□ -0.83
ATXN3-249ENST00000564606 EIF5BO60841 1220 aaKnown RBP9.87□□□□□ -0.83
ATXN3-249ENST00000564606 KIF1BO60333 1816 aa9.86□□□□□ -0.83
ATXN3-249ENST00000564606 CENPJQ9HC77 1338 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-249ENST00000564606 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
ATXN3-249ENST00000564606 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-249ENST00000564606 SLFN5Q08AF3 891 aa9.86□□□□□ -0.83
ATXN3-249ENST00000564606 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
ATXN3-249ENST00000564606 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-249ENST00000564606 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
ATXN3-249ENST00000564606 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
ATXN3-249ENST00000564606 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
ATXN3-249ENST00000564606 AFAP1Q8N556 730 aa9.85□□□□□ -0.83
ATXN3-249ENST00000564606 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
ATXN3-249ENST00000564606 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
ATXN3-249ENST00000564606 UPF2Q9HAU5 1272 aaKnown RBP9.85□□□□□ -0.83
ATXN3-249ENST00000564606 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-249ENST00000564606 EFCAB6Q5THR3 1501 aa9.85□□□□□ -0.83
ATXN3-249ENST00000564606 ZNF521Q96K83 1311 aa9.84□□□□□ -0.83
ATXN3-249ENST00000564606 WDR63Q8IWG1 891 aa9.84□□□□□ -0.83
ATXN3-249ENST00000564606 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-249ENST00000564606 CRBNQ96SW2 442 aa9.84□□□□□ -0.83
ATXN3-249ENST00000564606 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
ATXN3-249ENST00000564606 CLTCL1P53675 1640 aa9.84□□□□□ -0.83
ATXN3-249ENST00000564606 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
ATXN3-249ENST00000564606 NRXN1Q9ULB1 1477 aa9.84□□□□□ -0.83
ATXN3-249ENST00000564606 EVC2Q86UK5 1308 aa9.83□□□□□ -0.84
ATXN3-249ENST00000564606 DEKP35659 375 aaKnown RBP9.83□□□□□ -0.84
ATXN3-249ENST00000564606 BECN1Q14457 450 aa9.83□□□□□ -0.84
ATXN3-249ENST00000564606 CCDC27Q2M243 656 aa9.83□□□□□ -0.84
ATXN3-249ENST00000564606 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
ATXN3-249ENST00000564606 TRMT2AQ8IZ69 625 aaKnown RBP9.83□□□□□ -0.84
ATXN3-249ENST00000564606 RUNDC1Q96C34 613 aa9.83□□□□□ -0.84
ATXN3-249ENST00000564606 BCL11AQ9H165 835 aa9.83□□□□□ -0.84
ATXN3-249ENST00000564606 MLH3Q9UHC1 1453 aa9.83□□□□□ -0.84
ATXN3-249ENST00000564606 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
ATXN3-249ENST00000564606 NEFMP07197 916 aa9.81□□□□□ -0.84
ATXN3-249ENST00000564606 C14orf93Q9H972 538 aaKnown RBP9.81□□□□□ -0.84
ATXN3-249ENST00000564606 ASXL2Q76L83 1435 aa9.81□□□□□ -0.84
ATXN3-249ENST00000564606 NEO1Q92859 1461 aa9.8□□□□□ -0.84
ATXN3-249ENST00000564606 NPM2Q86SE8 214 aaKnown RBP9.8□□□□□ -0.84
ATXN3-249ENST00000564606 SLC52A1Q9NWF4 448 aa9.8□□□□□ -0.84
ATXN3-249ENST00000564606 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
ATXN3-249ENST00000564606 ERVK-7P63135 1459 aa9.79□□□□□ -0.84
ATXN3-249ENST00000564606 USP32Q8NFA0 1604 aa9.79□□□□□ -0.84
ATXN3-249ENST00000564606 ADGRB3O60242 1522 aa9.79□□□□□ -0.84
ATXN3-249ENST00000564606 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
ATXN3-249ENST00000564606 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
ATXN3-249ENST00000564606 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
ATXN3-249ENST00000564606 ERCC6L2Q5T890 1561 aa9.79□□□□□ -0.84
ATXN3-249ENST00000564606 APAF1O14727 1248 aa9.78□□□□□ -0.84
ATXN3-249ENST00000564606 NBR1Q14596 966 aa9.78□□□□□ -0.84
ATXN3-249ENST00000564606 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
ATXN3-249ENST00000564606 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
ATXN3-249ENST00000564606 RWDD1Q9H446 243 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-249ENST00000564606 ZFYVE9O95405 1425 aa9.78□□□□□ -0.84
ATXN3-249ENST00000564606 ARHGAP31Q2M1Z3 1444 aa9.78□□□□□ -0.84
ATXN3-249ENST00000564606 CD109Q6YHK3 1445 aa9.78□□□□□ -0.84
ATXN3-249ENST00000564606 ATAD2Q6PL18 1390 aa9.77□□□□□ -0.84
ATXN3-249ENST00000564606 ABCC11Q96J66 1382 aa9.77□□□□□ -0.84
ATXN3-249ENST00000564606 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.84
ATXN3-249ENST00000564606 POGZQ7Z3K3 1410 aa9.77□□□□□ -0.85
ATXN3-249ENST00000564606 CHGAP10645 457 aaKnown RBP9.77□□□□□ -0.85
ATXN3-249ENST00000564606 CALD1Q05682 793 aaKnown RBP9.77□□□□□ -0.85
ATXN3-249ENST00000564606 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
ATXN3-249ENST00000564606 TERF2IPQ9NYB0 399 aa9.77□□□□□ -0.85
ATXN3-249ENST00000564606 ABCA6Q8N139 1617 aa9.77□□□□□ -0.85
ATXN3-249ENST00000564606 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
ATXN3-249ENST00000564606 CLUAP1Q96AJ1 413 aa9.76□□□□□ -0.85
ATXN3-249ENST00000564606 IFT172Q9UG01 1749 aa9.76□□□□□ -0.85
ATXN3-249ENST00000564606 HECW2Q9P2P5 1572 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 NOS1P29475 1434 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 NSD3Q9BZ95 1437 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 MYOM1P52179 1685 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 ZC3H13Q5T200 1668 aaKnown RBP9.75□□□□□ -0.85
ATXN3-249ENST00000564606 IPO8O15397 1037 aaKnown RBP9.75□□□□□ -0.85
ATXN3-249ENST00000564606 PLIN1O60240 522 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-249ENST00000564606 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 IL16Q14005 1332 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 ADGRF5Q8IZF2 1346 aa9.75□□□□□ -0.85
ATXN3-249ENST00000564606 PAK3O75914 559 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-249ENST00000564606 HDGFL2Q7Z4V5 671 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-249ENST00000564606 MROH1Q8NDA8 1641 aa9.74□□□□□ -0.85
ATXN3-249ENST00000564606 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
ATXN3-249ENST00000564606 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
ATXN3-249ENST00000564606 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-249ENST00000564606 MED14O60244 1454 aa9.72□□□□□ -0.85
ATXN3-249ENST00000564606 PPRC1Q5VV67 1664 aaKnown RBP9.72□□□□□ -0.85
ATXN3-249ENST00000564606 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms