RNA–Protein interactions for RNA: ENST00000564336.1

NKD1-202, Transcript of naked cuticle homolog 1, humanhuman

TSL 3

Gene NKD1, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD1-202ENST00000564336 SHPRHQ149N8 1683 aa33.22■■■□□ 2.91
NKD1-202ENST00000564336 KNDC1Q76NI1 1749 aa33.22■■■□□ 2.91
NKD1-202ENST00000564336 SPATA31A6Q5VVP1 1343 aa33.18■■■□□ 2.9
NKD1-202ENST00000564336 LAMC1P11047 1609 aa33.17■■■□□ 2.9
NKD1-202ENST00000564336 DHX57Q6P158 1386 aaKnown RBP33.17■■■□□ 2.9
NKD1-202ENST00000564336 CDC42BPGQ6DT37 1551 aa33.16■■■□□ 2.9
NKD1-202ENST00000564336 SIRT1Q96EB6 747 aa33.15■■■□□ 2.9
NKD1-202ENST00000564336 DCAF11Q8TEB1 546 aa33.12■■■□□ 2.89
NKD1-202ENST00000564336 KDM2AQ9Y2K7 1162 aa33.12■■■□□ 2.89
NKD1-202ENST00000564336 LRRC59Q96AG4 307 aaKnown RBP33.11■■■□□ 2.89
NKD1-202ENST00000564336 ADGRB1O14514 1584 aa33.11■■■□□ 2.89
NKD1-202ENST00000564336 SOS2Q07890 1332 aaPredicted RBP33.1■■■□□ 2.89
NKD1-202ENST00000564336 PNPLA6Q8IY17 1366 aa33.09■■■□□ 2.89
NKD1-202ENST00000564336 NUTM2FA1L443 756 aa33.06■■■□□ 2.88
NKD1-202ENST00000564336 NUTM2BA6NNL0 878 aaPredicted RBP33.05■■■□□ 2.88
NKD1-202ENST00000564336 NUTM2EB1AL46 878 aaPredicted RBP33.05■■■□□ 2.88
NKD1-202ENST00000564336 NUTM2AQ8IVF1 878 aaPredicted RBP33.05■■■□□ 2.88
NKD1-202ENST00000564336 ESCO1Q5FWF5 840 aa33.04■■■□□ 2.88
NKD1-202ENST00000564336 PRAM1Q96QH2 718 aa33.03■■■□□ 2.88
NKD1-202ENST00000564336 FMN2Q9NZ56 1722 aa33.02■■■□□ 2.88
NKD1-202ENST00000564336 DLC1Q96QB1 1528 aa33.01■■■□□ 2.87
NKD1-202ENST00000564336 SAFB2Q14151 953 aaKnown RBP eCLIP32.99■■■□□ 2.87
NKD1-202ENST00000564336 STAC3Q96MF2 364 aa32.99■■■□□ 2.87
NKD1-202ENST00000564336 PXDNQ92626 1479 aa32.99■■■□□ 2.87
NKD1-202ENST00000564336 MEX3CQ5U5Q3 659 aaKnown RBP32.98■■■□□ 2.87
NKD1-202ENST00000564336 FOXO3O43524 673 aa32.97■■■□□ 2.87
NKD1-202ENST00000564336 TRAK1Q9UPV9 953 aa32.97■■■□□ 2.87
NKD1-202ENST00000564336 RGPD8O14715 1765 aaPredicted RBP32.96■■■□□ 2.87
NKD1-202ENST00000564336 XPCQ01831 940 aaPredicted RBP32.95■■■□□ 2.87
NKD1-202ENST00000564336 NPHP3Q7Z494 1330 aa32.93■■■□□ 2.86
NKD1-202ENST00000564336 POGKQ9P215 609 aa32.9■■■□□ 2.86
NKD1-202ENST00000564336 AFF2P51816 1311 aa32.88■■■□□ 2.85
NKD1-202ENST00000564336 ZNF772Q68DY9 489 aaPredicted RBP32.88■■■□□ 2.85
NKD1-202ENST00000564336 COL22A1Q8NFW1 1626 aaPredicted RBP32.88■■■□□ 2.85
NKD1-202ENST00000564336 USP32Q8NFA0 1604 aa32.87■■■□□ 2.85
NKD1-202ENST00000564336 ADGRB2O60241 1585 aa32.85■■■□□ 2.85
NKD1-202ENST00000564336 HIRIP3Q9BW71 556 aaPredicted RBP32.85■■■□□ 2.85
NKD1-202ENST00000564336 ADAMTS2O95450 1211 aa32.84■■■□□ 2.85
NKD1-202ENST00000564336 C8orf37Q96NL8 207 aa32.84■■■□□ 2.85
NKD1-202ENST00000564336 SIN3AQ96ST3 1273 aa32.83■■■□□ 2.85
NKD1-202ENST00000564336 MINK1Q8N4C8 1332 aaPredicted RBP32.82■■■□□ 2.84
NKD1-202ENST00000564336 KIF1AQ12756 1690 aa32.82■■■□□ 2.84
NKD1-202ENST00000564336 NBPF1Q3BBV0 1214 aa32.82■■■□□ 2.84
NKD1-202ENST00000564336 PHF8Q9UPP1 1060 aa32.82■■■□□ 2.84
NKD1-202ENST00000564336 ARHGEF28Q8N1W1 1705 aaKnown RBP32.81■■■□□ 2.84
NKD1-202ENST00000564336 PRR36Q9H6K5 1346 aa32.8■■■□□ 2.84
NKD1-202ENST00000564336 KRT28Q7Z3Y7 464 aa32.8■■■□□ 2.84
NKD1-202ENST00000564336 SPATA31A3Q5VYP0 1347 aa32.79■■■□□ 2.84
NKD1-202ENST00000564336 KIAA1210Q9ULL0 1709 aa32.78■■■□□ 2.84
NKD1-202ENST00000564336 L3MBTL2Q969R5 705 aa32.77■■■□□ 2.84
NKD1-202ENST00000564336 ANKARQ7Z5J8 1434 aa32.77■■■□□ 2.84
NKD1-202ENST00000564336 WASLO00401 505 aaPredicted RBP32.75■■■□□ 2.83
NKD1-202ENST00000564336 PMFBP1Q8TBY8 1022 aa32.74■■■□□ 2.83
NKD1-202ENST00000564336 NGLY1Q96IV0 654 aa32.74■■■□□ 2.83
NKD1-202ENST00000564336 RXRBP28702 533 aa32.73■■■□□ 2.83
NKD1-202ENST00000564336 FNBP4Q8N3X1 1017 aaPredicted RBP32.72■■■□□ 2.83
NKD1-202ENST00000564336 QTRT2Q9H974 415 aaKnown RBP32.72■■■□□ 2.83
NKD1-202ENST00000564336 TULP4Q9NRJ4 1543 aa32.69■■■□□ 2.82
NKD1-202ENST00000564336 SBNO1A3KN83 1393 aa32.67■■■□□ 2.82
NKD1-202ENST00000564336 MARF1Q9Y4F3 1742 aaKnown RBP32.66■■■□□ 2.82
NKD1-202ENST00000564336 TNS3Q68CZ2 1445 aa32.66■■■□□ 2.82
NKD1-202ENST00000564336 PSME1Q06323 249 aa32.65■■■□□ 2.82
NKD1-202ENST00000564336 NEUROD1Q13562 356 aa32.65■■■□□ 2.82
NKD1-202ENST00000564336 CDK12Q9NYV4 1490 aaPredicted RBP32.64■■■□□ 2.82
NKD1-202ENST00000564336 USP21Q9UK80 565 aa32.64■■■□□ 2.82
NKD1-202ENST00000564336 BCL9LQ86UU0 1499 aa32.63■■■□□ 2.81
NKD1-202ENST00000564336 CABLES1Q8TDN4 633 aa32.63■■■□□ 2.81
NKD1-202ENST00000564336 TRPM3Q9HCF6 1732 aaPredicted RBP32.63■■■□□ 2.81
NKD1-202ENST00000564336 RBM6P78332 1123 aaKnown RBP32.62■■■□□ 2.81
NKD1-202ENST00000564336 CDK19Q9BWU1 502 aa32.62■■■□□ 2.81
NKD1-202ENST00000564336 ATP7BP35670 1465 aa32.61■■■□□ 2.81
NKD1-202ENST00000564336 NUDT16Q96DE0 195 aaKnown RBP32.61■■■□□ 2.81
NKD1-202ENST00000564336 EIF3AQ14152 1382 aaKnown RBP32.6■■■□□ 2.81
NKD1-202ENST00000564336 RGS12O14924 1447 aa32.59■■■□□ 2.81
NKD1-202ENST00000564336 ATRNO75882 1429 aa32.59■■■□□ 2.81
NKD1-202ENST00000564336 TRPC5Q9UL62 973 aaPredicted RBP32.55■■■□□ 2.8
NKD1-202ENST00000564336 ALS2Q96Q42 1657 aa32.55■■■□□ 2.8
NKD1-202ENST00000564336 TRIM26Q12899 539 aaPredicted RBP32.54■■■□□ 2.8
NKD1-202ENST00000564336 NBPF8Q3BBV2 869 aa32.54■■■□□ 2.8
NKD1-202ENST00000564336 TRPM1Q7Z4N2 1603 aa32.54■■■□□ 2.8
NKD1-202ENST00000564336 ABCA3Q99758 1704 aa32.54■■■□□ 2.8
NKD1-202ENST00000564336 SLIT2O94813 1529 aa32.53■■■□□ 2.8
NKD1-202ENST00000564336 PLEKHG5O94827 1062 aa32.53■■■□□ 2.8
NKD1-202ENST00000564336 LMOD2Q6P5Q4 547 aa32.52■■■□□ 2.8
NKD1-202ENST00000564336 UPF1Q92900 1129 aaKnown RBP eCLIP32.52■■■□□ 2.8
NKD1-202ENST00000564336 ARHGEF10O15013 1369 aa32.52■■■□□ 2.8
NKD1-202ENST00000564336 CENPJQ9HC77 1338 aaPredicted RBP32.51■■■□□ 2.79
NKD1-202ENST00000564336 GPRASP1Q5JY77 1395 aa32.5■■■□□ 2.79
NKD1-202ENST00000564336 NGDNQ8NEJ9 315 aaKnown RBP32.5■■■□□ 2.79
NKD1-202ENST00000564336 TOPAZ1Q8N9V7 1692 aa32.5■■■□□ 2.79
NKD1-202ENST00000564336 ITSN1Q15811 1721 aa32.48■■■□□ 2.79
NKD1-202ENST00000564336 CCDC61Q9Y6R9 512 aa32.47■■■□□ 2.79
NKD1-202ENST00000564336 PLEKHG3A1L390 1219 aa32.46■■■□□ 2.79
NKD1-202ENST00000564336 FAM83GA6ND36 823 aa32.46■■■□□ 2.79
NKD1-202ENST00000564336 UNC5CLQ8IV45 518 aa32.46■■■□□ 2.79
NKD1-202ENST00000564336 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.46■■■□□ 2.79
NKD1-202ENST00000564336 POLR3AO14802 1390 aaPredicted RBP32.45■■■□□ 2.79
NKD1-202ENST00000564336 QRICH2Q9H0J4 1663 aa32.45■■■□□ 2.79
NKD1-202ENST00000564336 ACEP12821 1306 aa32.44■■■□□ 2.78
NKD1-202ENST00000564336 CRYBG1Q9Y4K1 1723 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 312.3 ms