RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 ROBO2Q9HCK4 1378 aa26.33■■□□□ 1.81
PKD1-227ENST00000564313 TMEM132EQ6IEE7 984 aa26.33■■□□□ 1.81
PKD1-227ENST00000564313 ADGRB1O14514 1584 aa26.32■■□□□ 1.8
PKD1-227ENST00000564313 ADGRL3Q9HAR2 1447 aa26.31■■□□□ 1.8
PKD1-227ENST00000564313 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.31■■□□□ 1.8
PKD1-227ENST00000564313 CADPS2Q86UW7 1296 aa26.3■■□□□ 1.8
PKD1-227ENST00000564313 SIRT1Q96EB6 747 aa26.3■■□□□ 1.8
PKD1-227ENST00000564313 TONSLQ96HA7 1378 aa26.3■■□□□ 1.8
PKD1-227ENST00000564313 RXRBP28702 533 aa26.29■■□□□ 1.8
PKD1-227ENST00000564313 STK26Q9P289 416 aa26.29■■□□□ 1.8
PKD1-227ENST00000564313 ATF3P18847 181 aa26.28■■□□□ 1.8
PKD1-227ENST00000564313 DLC1Q96QB1 1528 aa26.28■■□□□ 1.8
PKD1-227ENST00000564313 NALCNQ8IZF0 1738 aa26.28■■□□□ 1.8
PKD1-227ENST00000564313 SRCAPQ6ZRS2 3230 aa26.27■■□□□ 1.8
PKD1-227ENST00000564313 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
PKD1-227ENST00000564313 AHDC1Q5TGY3 1603 aaPredicted RBP26.23■■□□□ 1.79
PKD1-227ENST00000564313 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
PKD1-227ENST00000564313 CDC42BPGQ6DT37 1551 aa26.19■■□□□ 1.78
PKD1-227ENST00000564313 TRPM1Q7Z4N2 1603 aa26.18■■□□□ 1.78
PKD1-227ENST00000564313 NUTM2BA6NNL0 878 aaPredicted RBP26.18■■□□□ 1.78
PKD1-227ENST00000564313 NUTM2EB1AL46 878 aaPredicted RBP26.18■■□□□ 1.78
PKD1-227ENST00000564313 WAPLQ7Z5K2 1190 aa26.18■■□□□ 1.78
PKD1-227ENST00000564313 NUTM2AQ8IVF1 878 aaPredicted RBP26.18■■□□□ 1.78
PKD1-227ENST00000564313 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
PKD1-227ENST00000564313 TRAK1Q9UPV9 953 aa26.17■■□□□ 1.78
PKD1-227ENST00000564313 POGKQ9P215 609 aa26.16■■□□□ 1.78
PKD1-227ENST00000564313 TIMELESSQ9UNS1 1208 aa26.16■■□□□ 1.78
PKD1-227ENST00000564313 PLEKHH1Q9ULM0 1364 aa26.16■■□□□ 1.78
PKD1-227ENST00000564313 MST1RQ04912 1400 aa26.15■■□□□ 1.78
PKD1-227ENST00000564313 ARHGEF28Q8N1W1 1705 aaKnown RBP26.15■■□□□ 1.78
PKD1-227ENST00000564313 PRAM1Q96QH2 718 aa26.15■■□□□ 1.78
PKD1-227ENST00000564313 AFF2P51816 1311 aa26.14■■□□□ 1.78
PKD1-227ENST00000564313 NBPF1Q3BBV0 1214 aa26.13■■□□□ 1.77
PKD1-227ENST00000564313 ROCK2O75116 1388 aaKnown RBP26.11■■□□□ 1.77
PKD1-227ENST00000564313 BRINP3Q76B58 766 aa26.11■■□□□ 1.77
PKD1-227ENST00000564313 RGS12O14924 1447 aa26.1■■□□□ 1.77
PKD1-227ENST00000564313 ADGRB2O60241 1585 aa26.1■■□□□ 1.77
PKD1-227ENST00000564313 C1orf167Q5SNV9 1468 aa26.08■■□□□ 1.77
PKD1-227ENST00000564313 GPRASP1Q5JY77 1395 aa26.07■■□□□ 1.76
PKD1-227ENST00000564313 RALGAPBQ86X10 1494 aa26.07■■□□□ 1.76
PKD1-227ENST00000564313 NBPF8Q3BBV2 869 aa26.07■■□□□ 1.76
PKD1-227ENST00000564313 FMN2Q9NZ56 1722 aa26.06■■□□□ 1.76
PKD1-227ENST00000564313 SAFB2Q14151 953 aaKnown RBP eCLIP26.06■■□□□ 1.76
PKD1-227ENST00000564313 RBM6P78332 1123 aaKnown RBP26.04■■□□□ 1.76
PKD1-227ENST00000564313 QTRT2Q9H974 415 aaKnown RBP26.04■■□□□ 1.76
PKD1-227ENST00000564313 EIF3AQ14152 1382 aaKnown RBP26.04■■□□□ 1.76
PKD1-227ENST00000564313 C8orf37Q96NL8 207 aa26.01■■□□□ 1.75
PKD1-227ENST00000564313 CENPJQ9HC77 1338 aaPredicted RBP26■■□□□ 1.75
PKD1-227ENST00000564313 ORAI2Q96SN7 254 aa26■■□□□ 1.75
PKD1-227ENST00000564313 NHSL1Q5SYE7 1610 aa25.99■■□□□ 1.75
PKD1-227ENST00000564313 MINK1Q8N4C8 1332 aaPredicted RBP25.99■■□□□ 1.75
PKD1-227ENST00000564313 ANKARQ7Z5J8 1434 aa25.98■■□□□ 1.75
PKD1-227ENST00000564313 CARD11Q9BXL7 1154 aa25.98■■□□□ 1.75
PKD1-227ENST00000564313 DDX17Q92841 729 aaKnown RBP25.97■■□□□ 1.75
PKD1-227ENST00000564313 NUTM2FA1L443 756 aa25.96■■□□□ 1.75
PKD1-227ENST00000564313 LRRC59Q96AG4 307 aaKnown RBP25.96■■□□□ 1.75
PKD1-227ENST00000564313 KIF1AQ12756 1690 aa25.96■■□□□ 1.75
PKD1-227ENST00000564313 QRICH2Q9H0J4 1663 aa25.96■■□□□ 1.75
PKD1-227ENST00000564313 TULP4Q9NRJ4 1543 aa25.95■■□□□ 1.74
PKD1-227ENST00000564313 WASLO00401 505 aaPredicted RBP25.95■■□□□ 1.74
PKD1-227ENST00000564313 ESCO1Q5FWF5 840 aa25.95■■□□□ 1.74
PKD1-227ENST00000564313 HIRIP3Q9BW71 556 aaPredicted RBP25.95■■□□□ 1.74
PKD1-227ENST00000564313 PNPLA6Q8IY17 1366 aa25.93■■□□□ 1.74
PKD1-227ENST00000564313 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
PKD1-227ENST00000564313 NPHP3Q7Z494 1330 aa25.9■■□□□ 1.74
PKD1-227ENST00000564313 USP32Q8NFA0 1604 aa25.9■■□□□ 1.74
PKD1-227ENST00000564313 NGLY1Q96IV0 654 aa25.9■■□□□ 1.74
PKD1-227ENST00000564313 ZRANB1Q9UGI0 708 aa25.89■■□□□ 1.74
PKD1-227ENST00000564313 RGPD8O14715 1765 aaPredicted RBP25.89■■□□□ 1.73
PKD1-227ENST00000564313 ITSN1Q15811 1721 aa25.88■■□□□ 1.73
PKD1-227ENST00000564313 SBNO2Q9Y2G9 1366 aa25.87■■□□□ 1.73
PKD1-227ENST00000564313 ADAMTS2O95450 1211 aa25.87■■□□□ 1.73
PKD1-227ENST00000564313 SOS2Q07890 1332 aaPredicted RBP25.87■■□□□ 1.73
PKD1-227ENST00000564313 CDK19Q9BWU1 502 aa25.86■■□□□ 1.73
PKD1-227ENST00000564313 PHF8Q9UPP1 1060 aa25.86■■□□□ 1.73
PKD1-227ENST00000564313 FOXO3O43524 673 aa25.85■■□□□ 1.73
PKD1-227ENST00000564313 ATP7BP35670 1465 aa25.85■■□□□ 1.73
PKD1-227ENST00000564313 EVC2Q86UK5 1308 aa25.84■■□□□ 1.73
PKD1-227ENST00000564313 PRR36Q9H6K5 1346 aa25.83■■□□□ 1.73
PKD1-227ENST00000564313 EP400Q96L91 3159 aa25.82■■□□□ 1.72
PKD1-227ENST00000564313 PXDNQ92626 1479 aa25.81■■□□□ 1.72
PKD1-227ENST00000564313 SLC24A1O60721 1099 aa25.81■■□□□ 1.72
PKD1-227ENST00000564313 SRPK2P78362 688 aaKnown RBP25.81■■□□□ 1.72
PKD1-227ENST00000564313 NUDT16Q96DE0 195 aaKnown RBP25.81■■□□□ 1.72
PKD1-227ENST00000564313 USP21Q9UK80 565 aa25.81■■□□□ 1.72
PKD1-227ENST00000564313 TOPAZ1Q8N9V7 1692 aa25.8■■□□□ 1.72
PKD1-227ENST00000564313 XPCQ01831 940 aaPredicted RBP25.79■■□□□ 1.72
PKD1-227ENST00000564313 TRPC5Q9UL62 973 aaPredicted RBP25.79■■□□□ 1.72
PKD1-227ENST00000564313 CCDC61Q9Y6R9 512 aa25.79■■□□□ 1.72
PKD1-227ENST00000564313 PSME1Q06323 249 aa25.77■■□□□ 1.72
PKD1-227ENST00000564313 USP47Q96K76 1375 aa25.77■■□□□ 1.72
PKD1-227ENST00000564313 FNBP4Q8N3X1 1017 aaPredicted RBP25.75■■□□□ 1.71
PKD1-227ENST00000564313 PMFBP1Q8TBY8 1022 aa25.75■■□□□ 1.71
PKD1-227ENST00000564313 KRT28Q7Z3Y7 464 aa25.74■■□□□ 1.71
PKD1-227ENST00000564313 CABP2Q9NPB3 220 aa25.74■■□□□ 1.71
PKD1-227ENST00000564313 ATRNO75882 1429 aa25.73■■□□□ 1.71
PKD1-227ENST00000564313 NGDNQ8NEJ9 315 aaKnown RBP25.73■■□□□ 1.71
PKD1-227ENST00000564313 SBNO1A3KN83 1393 aa25.72■■□□□ 1.71
PKD1-227ENST00000564313 ST20-MTHFSA0A0A6YYL1 179 aa25.72■■□□□ 1.71
PKD1-227ENST00000564313 PLEKHG3A1L390 1219 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms