RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 FMN2Q9NZ56 1722 aa21.64■■□□□ 1.05
SNX29-203ENST00000564111 KIAA1210Q9ULL0 1709 aa21.63■■□□□ 1.05
SNX29-203ENST00000564111 ADGRB2O60241 1585 aa21.59■■□□□ 1.05
SNX29-203ENST00000564111 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
SNX29-203ENST00000564111 ADGRB1O14514 1584 aa21.58■■□□□ 1.05
SNX29-203ENST00000564111 STK26Q9P289 416 aa21.57■■□□□ 1.04
SNX29-203ENST00000564111 EIF3AQ14152 1382 aaKnown RBP21.57■■□□□ 1.04
SNX29-203ENST00000564111 CFAP70Q5T0N1 1121 aa21.55■■□□□ 1.04
SNX29-203ENST00000564111 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
SNX29-203ENST00000564111 TMEM132EQ6IEE7 984 aa21.54■■□□□ 1.04
SNX29-203ENST00000564111 DCAF11Q8TEB1 546 aa21.54■■□□□ 1.04
SNX29-203ENST00000564111 NPHP3Q7Z494 1330 aa21.53■■□□□ 1.04
SNX29-203ENST00000564111 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
SNX29-203ENST00000564111 ANKARQ7Z5J8 1434 aa21.52■■□□□ 1.04
SNX29-203ENST00000564111 SOS2Q07890 1332 aaPredicted RBP21.51■■□□□ 1.03
SNX29-203ENST00000564111 LRP6O75581 1613 aa21.51■■□□□ 1.03
SNX29-203ENST00000564111 PNPLA6Q8IY17 1366 aa21.51■■□□□ 1.03
SNX29-203ENST00000564111 ARHGEF28Q8N1W1 1705 aaKnown RBP21.5■■□□□ 1.03
SNX29-203ENST00000564111 PLEKHH1Q9ULM0 1364 aa21.5■■□□□ 1.03
SNX29-203ENST00000564111 WAPLQ7Z5K2 1190 aa21.49■■□□□ 1.03
SNX29-203ENST00000564111 POGKQ9P215 609 aa21.49■■□□□ 1.03
SNX29-203ENST00000564111 RGS17Q9UGC6 210 aaPredicted RBP21.49■■□□□ 1.03
SNX29-203ENST00000564111 ZNF772Q68DY9 489 aaPredicted RBP21.48■■□□□ 1.03
SNX29-203ENST00000564111 KDM2AQ9Y2K7 1162 aa21.48■■□□□ 1.03
SNX29-203ENST00000564111 PXDNQ92626 1479 aa21.47■■□□□ 1.03
SNX29-203ENST00000564111 ESCO1Q5FWF5 840 aa21.47■■□□□ 1.03
SNX29-203ENST00000564111 ITSN1Q15811 1721 aa21.47■■□□□ 1.03
SNX29-203ENST00000564111 PRAM1Q96QH2 718 aa21.46■■□□□ 1.03
SNX29-203ENST00000564111 ORAI2Q96SN7 254 aa21.45■■□□□ 1.03
SNX29-203ENST00000564111 TULP4Q9NRJ4 1543 aa21.43■■□□□ 1.02
SNX29-203ENST00000564111 MARF1Q9Y4F3 1742 aaKnown RBP21.43■■□□□ 1.02
SNX29-203ENST00000564111 RGPD8O14715 1765 aaPredicted RBP21.42■■□□□ 1.02
SNX29-203ENST00000564111 USP32Q8NFA0 1604 aa21.4■■□□□ 1.02
SNX29-203ENST00000564111 PSME1Q06323 249 aa21.39■■□□□ 1.01
SNX29-203ENST00000564111 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.01
SNX29-203ENST00000564111 NUTM2BA6NNL0 878 aaPredicted RBP21.38■■□□□ 1.01
SNX29-203ENST00000564111 NUTM2EB1AL46 878 aaPredicted RBP21.38■■□□□ 1.01
SNX29-203ENST00000564111 NUTM2AQ8IVF1 878 aaPredicted RBP21.38■■□□□ 1.01
SNX29-203ENST00000564111 CDK12Q9NYV4 1490 aaPredicted RBP21.38■■□□□ 1.01
SNX29-203ENST00000564111 PHF8Q9UPP1 1060 aa21.37■■□□□ 1.01
SNX29-203ENST00000564111 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
SNX29-203ENST00000564111 DDX17Q92841 729 aaKnown RBP21.36■■□□□ 1.01
SNX29-203ENST00000564111 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
SNX29-203ENST00000564111 TRPM1Q7Z4N2 1603 aa21.36■■□□□ 1.01
SNX29-203ENST00000564111 POTEAQ6S8J7 498 aa21.35■■□□□ 1.01
SNX29-203ENST00000564111 TNS3Q68CZ2 1445 aa21.35■■□□□ 1.01
SNX29-203ENST00000564111 ARHGEF10O15013 1369 aa21.34■■□□□ 1.01
SNX29-203ENST00000564111 FOXO3O43524 673 aa21.33■■□□□ 1.01
SNX29-203ENST00000564111 AFF2P51816 1311 aa21.33■■□□□ 1
SNX29-203ENST00000564111 SAFB2Q14151 953 aaKnown RBP eCLIP21.33■■□□□ 1
SNX29-203ENST00000564111 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
SNX29-203ENST00000564111 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
SNX29-203ENST00000564111 SPATA31A3Q5VYP0 1347 aa21.32■■□□□ 1
SNX29-203ENST00000564111 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
SNX29-203ENST00000564111 TRPM3Q9HCF6 1732 aaPredicted RBP21.31■■□□□ 1
SNX29-203ENST00000564111 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
SNX29-203ENST00000564111 MINK1Q8N4C8 1332 aaPredicted RBP21.31■■□□□ 1
SNX29-203ENST00000564111 NUTM2FA1L443 756 aa21.31■■□□□ 1
SNX29-203ENST00000564111 KRT28Q7Z3Y7 464 aa21.31■■□□□ 1
SNX29-203ENST00000564111 GPRASP1Q5JY77 1395 aa21.3■■□□□ 1
SNX29-203ENST00000564111 ABCA3Q99758 1704 aa21.3■■□□□ 1
SNX29-203ENST00000564111 C8orf37Q96NL8 207 aa21.29■■□□□ 1
SNX29-203ENST00000564111 ATP7BP35670 1465 aa21.28■■□□□ 1
SNX29-203ENST00000564111 ALS2Q96Q42 1657 aa21.27■■□□□ 1
SNX29-203ENST00000564111 RXRBP28702 533 aa21.27■■□□□ 1
SNX29-203ENST00000564111 L3MBTL2Q969R5 705 aa21.27■■□□□ 1
SNX29-203ENST00000564111 NGLY1Q96IV0 654 aa21.27■□□□□ 0.99
SNX29-203ENST00000564111 NWD2Q9ULI1 1742 aa21.25■□□□□ 0.99
SNX29-203ENST00000564111 CENPJQ9HC77 1338 aaPredicted RBP21.25■□□□□ 0.99
SNX29-203ENST00000564111 ADAMTS2O95450 1211 aa21.24■□□□□ 0.99
SNX29-203ENST00000564111 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
SNX29-203ENST00000564111 RBM6P78332 1123 aaKnown RBP21.23■□□□□ 0.99
SNX29-203ENST00000564111 XPCQ01831 940 aaPredicted RBP21.23■□□□□ 0.99
SNX29-203ENST00000564111 FNBP4Q8N3X1 1017 aaPredicted RBP21.23■□□□□ 0.99
SNX29-203ENST00000564111 TRPC5Q9UL62 973 aaPredicted RBP21.22■□□□□ 0.99
SNX29-203ENST00000564111 TONSLQ96HA7 1378 aa21.22■□□□□ 0.99
SNX29-203ENST00000564111 PRR36Q9H6K5 1346 aa21.21■□□□□ 0.99
SNX29-203ENST00000564111 BRD4O60885 1362 aaPredicted RBP21.21■□□□□ 0.99
SNX29-203ENST00000564111 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
SNX29-203ENST00000564111 ATRNO75882 1429 aa21.21■□□□□ 0.99
SNX29-203ENST00000564111 NEUROD1Q13562 356 aa21.21■□□□□ 0.99
SNX29-203ENST00000564111 SIN3AQ96ST3 1273 aa21.21■□□□□ 0.99
SNX29-203ENST00000564111 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
SNX29-203ENST00000564111 NGDNQ8NEJ9 315 aaKnown RBP21.2■□□□□ 0.98
SNX29-203ENST00000564111 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
SNX29-203ENST00000564111 USP21Q9UK80 565 aa21.2■□□□□ 0.98
SNX29-203ENST00000564111 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
SNX29-203ENST00000564111 PLCH1Q4KWH8 1693 aa21.19■□□□□ 0.98
SNX29-203ENST00000564111 CDK19Q9BWU1 502 aa21.19■□□□□ 0.98
SNX29-203ENST00000564111 QTRT2Q9H974 415 aaKnown RBP21.19■□□□□ 0.98
SNX29-203ENST00000564111 CRYBG1Q9Y4K1 1723 aa21.19■□□□□ 0.98
SNX29-203ENST00000564111 POLR3AO14802 1390 aaPredicted RBP21.19■□□□□ 0.98
SNX29-203ENST00000564111 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
SNX29-203ENST00000564111 PMFBP1Q8TBY8 1022 aa21.18■□□□□ 0.98
SNX29-203ENST00000564111 COL14A1Q05707 1796 aaKnown RBP21.17■□□□□ 0.98
SNX29-203ENST00000564111 CCDC61Q9Y6R9 512 aa21.17■□□□□ 0.98
SNX29-203ENST00000564111 SLIT2O94813 1529 aa21.17■□□□□ 0.98
SNX29-203ENST00000564111 PLEKHG3A1L390 1219 aa21.15■□□□□ 0.98
SNX29-203ENST00000564111 EVC2Q86UK5 1308 aa21.15■□□□□ 0.98
SNX29-203ENST00000564111 RGS12O14924 1447 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms