RNA–Protein interactions for RNA: ENST00000563951.1

CCDC33-211, Transcript of coiled-coil domain containing 33, humanhuman

TSL 5

Gene CCDC33, Length 308 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-211ENST00000563951 COL16A1Q07092 1604 aaPredicted RBP12.41□□□□□ -0.42
CCDC33-211ENST00000563951 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
CCDC33-211ENST00000563951 WAPLQ7Z5K2 1190 aa12.41□□□□□ -0.42
CCDC33-211ENST00000563951 ARHGEF28Q8N1W1 1705 aaKnown RBP12.41□□□□□ -0.42
CCDC33-211ENST00000563951 L3MBTL2Q969R5 705 aa12.41□□□□□ -0.42
CCDC33-211ENST00000563951 SLAIN2Q9P270 581 aa12.41□□□□□ -0.42
CCDC33-211ENST00000563951 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
CCDC33-211ENST00000563951 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
CCDC33-211ENST00000563951 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
CCDC33-211ENST00000563951 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.43
CCDC33-211ENST00000563951 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
CCDC33-211ENST00000563951 NHSL1Q5SYE7 1610 aa12.39□□□□□ -0.43
CCDC33-211ENST00000563951 TRPM1Q7Z4N2 1603 aa12.39□□□□□ -0.43
CCDC33-211ENST00000563951 FMN2Q9NZ56 1722 aa12.39□□□□□ -0.43
CCDC33-211ENST00000563951 PHLPP1O60346 1717 aa12.38□□□□□ -0.43
CCDC33-211ENST00000563951 ATF3P18847 181 aa12.38□□□□□ -0.43
CCDC33-211ENST00000563951 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
CCDC33-211ENST00000563951 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
CCDC33-211ENST00000563951 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
CCDC33-211ENST00000563951 MED1Q15648 1581 aaPredicted RBP12.36□□□□□ -0.43
CCDC33-211ENST00000563951 NBPF1Q3BBV0 1214 aa12.36□□□□□ -0.43
CCDC33-211ENST00000563951 PRAM1Q96QH2 718 aa12.36□□□□□ -0.43
CCDC33-211ENST00000563951 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
CCDC33-211ENST00000563951 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
CCDC33-211ENST00000563951 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
CCDC33-211ENST00000563951 TRAK1Q9UPV9 953 aa12.34□□□□□ -0.43
CCDC33-211ENST00000563951 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC33-211ENST00000563951 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
CCDC33-211ENST00000563951 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
CCDC33-211ENST00000563951 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
CCDC33-211ENST00000563951 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
CCDC33-211ENST00000563951 RALGAPBQ86X10 1494 aa12.31□□□□□ -0.44
CCDC33-211ENST00000563951 SHPRHQ149N8 1683 aa12.31□□□□□ -0.44
CCDC33-211ENST00000563951 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
CCDC33-211ENST00000563951 PXDNQ92626 1479 aa12.3□□□□□ -0.44
CCDC33-211ENST00000563951 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
CCDC33-211ENST00000563951 LRP6O75581 1613 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 TULP4Q9NRJ4 1543 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 NUTM2FA1L443 756 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 POGKQ9P215 609 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
CCDC33-211ENST00000563951 PRR36Q9H6K5 1346 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 JCADQ9P266 1359 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
CCDC33-211ENST00000563951 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
CCDC33-211ENST00000563951 ATP7BP35670 1465 aa12.28□□□□□ -0.44
CCDC33-211ENST00000563951 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
CCDC33-211ENST00000563951 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
CCDC33-211ENST00000563951 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
CCDC33-211ENST00000563951 ROCK2O75116 1388 aaKnown RBP12.28□□□□□ -0.44
CCDC33-211ENST00000563951 SOS2Q07890 1332 aaPredicted RBP12.27□□□□□ -0.45
CCDC33-211ENST00000563951 PNPLA6Q8IY17 1366 aa12.26□□□□□ -0.45
CCDC33-211ENST00000563951 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
CCDC33-211ENST00000563951 ESCO1Q5FWF5 840 aa12.25□□□□□ -0.45
CCDC33-211ENST00000563951 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
CCDC33-211ENST00000563951 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
CCDC33-211ENST00000563951 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
CCDC33-211ENST00000563951 CENPJQ9HC77 1338 aaPredicted RBP12.24□□□□□ -0.45
CCDC33-211ENST00000563951 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
CCDC33-211ENST00000563951 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
CCDC33-211ENST00000563951 EIF3AQ14152 1382 aaKnown RBP12.22□□□□□ -0.45
CCDC33-211ENST00000563951 NPHP3Q7Z494 1330 aa12.22□□□□□ -0.45
CCDC33-211ENST00000563951 FOXO3O43524 673 aa12.22□□□□□ -0.45
CCDC33-211ENST00000563951 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
CCDC33-211ENST00000563951 ITSN1Q15811 1721 aa12.22□□□□□ -0.45
CCDC33-211ENST00000563951 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
CCDC33-211ENST00000563951 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
CCDC33-211ENST00000563951 CDK19Q9BWU1 502 aa12.2□□□□□ -0.46
CCDC33-211ENST00000563951 ILDR2Q71H61 639 aa12.19□□□□□ -0.46
CCDC33-211ENST00000563951 PMFBP1Q8TBY8 1022 aa12.19□□□□□ -0.46
CCDC33-211ENST00000563951 LRRC59Q96AG4 307 aaKnown RBP12.19□□□□□ -0.46
CCDC33-211ENST00000563951 CARD11Q9BXL7 1154 aa12.19□□□□□ -0.46
CCDC33-211ENST00000563951 ABCA3Q99758 1704 aa12.19□□□□□ -0.46
CCDC33-211ENST00000563951 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
CCDC33-211ENST00000563951 TNS3Q68CZ2 1445 aa12.19□□□□□ -0.46
CCDC33-211ENST00000563951 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
CCDC33-211ENST00000563951 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
CCDC33-211ENST00000563951 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
CCDC33-211ENST00000563951 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
CCDC33-211ENST00000563951 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
CCDC33-211ENST00000563951 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
CCDC33-211ENST00000563951 SBNO1A3KN83 1393 aa12.17□□□□□ -0.46
CCDC33-211ENST00000563951 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
CCDC33-211ENST00000563951 KRT28Q7Z3Y7 464 aa12.16□□□□□ -0.46
CCDC33-211ENST00000563951 PPIP5K1Q6PFW1 1433 aa12.15□□□□□ -0.46
CCDC33-211ENST00000563951 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
CCDC33-211ENST00000563951 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
CCDC33-211ENST00000563951 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
CCDC33-211ENST00000563951 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
CCDC33-211ENST00000563951 TESK2Q96S53 571 aa12.14□□□□□ -0.47
CCDC33-211ENST00000563951 USP47Q96K76 1375 aa12.14□□□□□ -0.47
CCDC33-211ENST00000563951 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
CCDC33-211ENST00000563951 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
CCDC33-211ENST00000563951 MARF1Q9Y4F3 1742 aaKnown RBP12.13□□□□□ -0.47
CCDC33-211ENST00000563951 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
CCDC33-211ENST00000563951 ACEP12821 1306 aa12.12□□□□□ -0.47
CCDC33-211ENST00000563951 SRPK2P78362 688 aaKnown RBP12.12□□□□□ -0.47
CCDC33-211ENST00000563951 POTEAQ6S8J7 498 aa12.12□□□□□ -0.47
CCDC33-211ENST00000563951 AKAP12Q02952 1782 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms