RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
PTPN9-203ENST00000563835 WAPLQ7Z5K2 1190 aa13.57□□□□□ -0.24
PTPN9-203ENST00000563835 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
PTPN9-203ENST00000563835 SOCS7O14512 581 aa13.56□□□□□ -0.24
PTPN9-203ENST00000563835 DHX57Q6P158 1386 aaKnown RBP13.56□□□□□ -0.24
PTPN9-203ENST00000563835 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
PTPN9-203ENST00000563835 ARHGEF28Q8N1W1 1705 aaKnown RBP13.55□□□□□ -0.24
PTPN9-203ENST00000563835 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
PTPN9-203ENST00000563835 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
PTPN9-203ENST00000563835 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
PTPN9-203ENST00000563835 ADGRB2O60241 1585 aa13.53□□□□□ -0.24
PTPN9-203ENST00000563835 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
PTPN9-203ENST00000563835 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
PTPN9-203ENST00000563835 SPATA31A6Q5VVP1 1343 aa13.52□□□□□ -0.25
PTPN9-203ENST00000563835 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
PTPN9-203ENST00000563835 KIF1AQ12756 1690 aa13.52□□□□□ -0.25
PTPN9-203ENST00000563835 COL22A1Q8NFW1 1626 aaPredicted RBP13.51□□□□□ -0.25
PTPN9-203ENST00000563835 PXDNQ92626 1479 aa13.51□□□□□ -0.25
PTPN9-203ENST00000563835 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
PTPN9-203ENST00000563835 POTEAQ6S8J7 498 aa13.51□□□□□ -0.25
PTPN9-203ENST00000563835 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
PTPN9-203ENST00000563835 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN9-203ENST00000563835 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
PTPN9-203ENST00000563835 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
PTPN9-203ENST00000563835 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
PTPN9-203ENST00000563835 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
PTPN9-203ENST00000563835 SOS2Q07890 1332 aaPredicted RBP13.48□□□□□ -0.25
PTPN9-203ENST00000563835 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
PTPN9-203ENST00000563835 XPCQ01831 940 aaPredicted RBP13.47□□□□□ -0.25
PTPN9-203ENST00000563835 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
PTPN9-203ENST00000563835 MEX3CQ5U5Q3 659 aaKnown RBP13.47□□□□□ -0.25
PTPN9-203ENST00000563835 TRAK1Q9UPV9 953 aa13.47□□□□□ -0.25
PTPN9-203ENST00000563835 LRRC59Q96AG4 307 aaKnown RBP13.46□□□□□ -0.25
PTPN9-203ENST00000563835 ABCA3Q99758 1704 aa13.45□□□□□ -0.26
PTPN9-203ENST00000563835 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
PTPN9-203ENST00000563835 HIRIP3Q9BW71 556 aaPredicted RBP13.44□□□□□ -0.26
PTPN9-203ENST00000563835 TULP4Q9NRJ4 1543 aa13.44□□□□□ -0.26
PTPN9-203ENST00000563835 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
PTPN9-203ENST00000563835 TRPM1Q7Z4N2 1603 aa13.43□□□□□ -0.26
PTPN9-203ENST00000563835 FOXO3O43524 673 aa13.43□□□□□ -0.26
PTPN9-203ENST00000563835 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
PTPN9-203ENST00000563835 POGKQ9P215 609 aa13.43□□□□□ -0.26
PTPN9-203ENST00000563835 MINK1Q8N4C8 1332 aaPredicted RBP13.42□□□□□ -0.26
PTPN9-203ENST00000563835 ITSN1Q15811 1721 aa13.42□□□□□ -0.26
PTPN9-203ENST00000563835 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
PTPN9-203ENST00000563835 QRICH2Q9H0J4 1663 aa13.42□□□□□ -0.26
PTPN9-203ENST00000563835 AFF2P51816 1311 aa13.41□□□□□ -0.26
PTPN9-203ENST00000563835 ANKARQ7Z5J8 1434 aa13.41□□□□□ -0.26
PTPN9-203ENST00000563835 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
PTPN9-203ENST00000563835 SIN3AQ96ST3 1273 aa13.41□□□□□ -0.26
PTPN9-203ENST00000563835 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
PTPN9-203ENST00000563835 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
PTPN9-203ENST00000563835 ATP7BP35670 1465 aa13.4□□□□□ -0.26
PTPN9-203ENST00000563835 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
PTPN9-203ENST00000563835 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
PTPN9-203ENST00000563835 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
PTPN9-203ENST00000563835 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
PTPN9-203ENST00000563835 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
PTPN9-203ENST00000563835 CRYBG1Q9Y4K1 1723 aa13.38□□□□□ -0.27
PTPN9-203ENST00000563835 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
PTPN9-203ENST00000563835 ZNF772Q68DY9 489 aaPredicted RBP13.37□□□□□ -0.27
PTPN9-203ENST00000563835 L3MBTL2Q969R5 705 aa13.37□□□□□ -0.27
PTPN9-203ENST00000563835 NEUROD1Q13562 356 aa13.36□□□□□ -0.27
PTPN9-203ENST00000563835 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
PTPN9-203ENST00000563835 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
PTPN9-203ENST00000563835 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
PTPN9-203ENST00000563835 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
PTPN9-203ENST00000563835 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
PTPN9-203ENST00000563835 RGS12O14924 1447 aa13.35□□□□□ -0.27
PTPN9-203ENST00000563835 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
PTPN9-203ENST00000563835 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
PTPN9-203ENST00000563835 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
PTPN9-203ENST00000563835 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
PTPN9-203ENST00000563835 PHRF1Q9P1Y6 1649 aaKnown RBP13.32□□□□□ -0.28
PTPN9-203ENST00000563835 BCL9LQ86UU0 1499 aa13.32□□□□□ -0.28
PTPN9-203ENST00000563835 CDK12Q9NYV4 1490 aaPredicted RBP13.32□□□□□ -0.28
PTPN9-203ENST00000563835 ATRNO75882 1429 aa13.31□□□□□ -0.28
PTPN9-203ENST00000563835 NRAPQ86VF7 1730 aa13.31□□□□□ -0.28
PTPN9-203ENST00000563835 RXRBP28702 533 aa13.31□□□□□ -0.28
PTPN9-203ENST00000563835 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
PTPN9-203ENST00000563835 CABLES1Q8TDN4 633 aa13.31□□□□□ -0.28
PTPN9-203ENST00000563835 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
PTPN9-203ENST00000563835 PSME1Q06323 249 aa13.3□□□□□ -0.28
PTPN9-203ENST00000563835 LMOD2Q6P5Q4 547 aa13.3□□□□□ -0.28
PTPN9-203ENST00000563835 USP21Q9UK80 565 aa13.3□□□□□ -0.28
PTPN9-203ENST00000563835 SLIT2O94813 1529 aa13.29□□□□□ -0.28
PTPN9-203ENST00000563835 GLI3P10071 1580 aa13.29□□□□□ -0.28
PTPN9-203ENST00000563835 NUDT16Q96DE0 195 aaKnown RBP13.29□□□□□ -0.28
PTPN9-203ENST00000563835 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
PTPN9-203ENST00000563835 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
PTPN9-203ENST00000563835 CENPJQ9HC77 1338 aaPredicted RBP13.29□□□□□ -0.28
PTPN9-203ENST00000563835 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
PTPN9-203ENST00000563835 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
PTPN9-203ENST00000563835 NBPF8Q3BBV2 869 aa13.28□□□□□ -0.28
PTPN9-203ENST00000563835 FNBP4Q8N3X1 1017 aaPredicted RBP13.28□□□□□ -0.28
PTPN9-203ENST00000563835 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
PTPN9-203ENST00000563835 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
PTPN9-203ENST00000563835 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
PTPN9-203ENST00000563835 COL14A1Q05707 1796 aaKnown RBP13.26□□□□□ -0.29
PTPN9-203ENST00000563835 PPIP5K1Q6PFW1 1433 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms