RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 RIPK4P57078 832 aa7.16□□□□□ -1.26
TCF4-218ENST00000563686 LRPPRCP42704 1394 aaKnown RBP7.16□□□□□ -1.26
TCF4-218ENST00000563686 BCAR3O75815 825 aa7.15□□□□□ -1.26
TCF4-218ENST00000563686 BCORL1Q5H9F3 1711 aa7.15□□□□□ -1.26
TCF4-218ENST00000563686 COG3Q96JB2 828 aa7.15□□□□□ -1.26
TCF4-218ENST00000563686 KIF16BQ96L93 1317 aa7.15□□□□□ -1.26
TCF4-218ENST00000563686 ATP7AQ04656 1500 aa7.15□□□□□ -1.26
TCF4-218ENST00000563686 NOS1P29475 1434 aa7.15□□□□□ -1.27
TCF4-218ENST00000563686 NFKBIBQ15653 356 aa7.15□□□□□ -1.27
TCF4-218ENST00000563686 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.15□□□□□ -1.27
TCF4-218ENST00000563686 LAMC1P11047 1609 aa7.15□□□□□ -1.27
TCF4-218ENST00000563686 NSD2O96028 1365 aa7.14□□□□□ -1.27
TCF4-218ENST00000563686 CT47B1P0C2W7 299 aaPredicted RBP7.14□□□□□ -1.27
TCF4-218ENST00000563686 OSCARQ8IYS5 282 aa7.14□□□□□ -1.27
TCF4-218ENST00000563686 PIK3C2GO75747 1445 aa7.14□□□□□ -1.27
TCF4-218ENST00000563686 TMEM132EQ6IEE7 984 aa7.14□□□□□ -1.27
TCF4-218ENST00000563686 DENND4BO75064 1496 aaPredicted RBP7.14□□□□□ -1.27
TCF4-218ENST00000563686 TRPM2O94759 1503 aa7.14□□□□□ -1.27
TCF4-218ENST00000563686 OS9Q13438 667 aaPredicted RBP7.14□□□□□ -1.27
TCF4-218ENST00000563686 TRAPPC8Q9Y2L5 1435 aa7.13□□□□□ -1.27
TCF4-218ENST00000563686 PTMAP06454 111 aaKnown RBP7.13□□□□□ -1.27
TCF4-218ENST00000563686 ANKRD45Q5TZF3 282 aa7.13□□□□□ -1.27
TCF4-218ENST00000563686 MTHFSP49914 203 aa7.13□□□□□ -1.27
TCF4-218ENST00000563686 TCP11L2Q8N4U5 519 aa7.13□□□□□ -1.27
TCF4-218ENST00000563686 HMMRO75330 724 aa7.13□□□□□ -1.27
TCF4-218ENST00000563686 SKOR2Q2VWA4 1001 aaPredicted RBP7.13□□□□□ -1.27
TCF4-218ENST00000563686 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
TCF4-218ENST00000563686 PDZRN3Q9UPQ7 1066 aa7.13□□□□□ -1.27
TCF4-218ENST00000563686 WWC1Q8IX03 1113 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 NOB1Q9ULX3 412 aaKnown RBP7.12□□□□□ -1.27
TCF4-218ENST00000563686 ABCC1P33527 1531 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 MSNP26038 577 aaKnown RBP7.12□□□□□ -1.27
TCF4-218ENST00000563686 C20orf194Q5TEA3 1177 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 DUSP27Q5VZP5 1158 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 ZNF518AQ6AHZ1 1483 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 GPRASP1Q5JY77 1395 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 GNAI1P63096 354 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 ATAD2Q6PL18 1390 aa7.12□□□□□ -1.27
TCF4-218ENST00000563686 MVPQ14764 893 aaKnown RBP7.11□□□□□ -1.27
TCF4-218ENST00000563686 CDC42BPBQ9Y5S2 1711 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 CD109Q6YHK3 1445 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 C22orf23Q9BZE7 217 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 ADGRF5Q8IZF2 1346 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 SPHKAPQ2M3C7 1700 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 FOXD4L1Q9NU39 408 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 RNF123Q5XPI4 1314 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 UHRF1BP1LA0JNW5 1464 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 APBB1O00213 710 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 SOX12O15370 315 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 STK31Q9BXU1 1019 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 API5Q9BZZ5 524 aaKnown RBP7.11□□□□□ -1.27
TCF4-218ENST00000563686 GGNBP2Q9H3C7 697 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 CHMP5Q9NZZ3 219 aa7.11□□□□□ -1.27
TCF4-218ENST00000563686 CDK19Q9BWU1 502 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 KIF1BO60333 1816 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 TET3O43151 1660 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 ST18O60284 1047 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 EID1Q9Y6B2 187 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 RSPH6AQ9H0K4 717 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 EXOSC9Q06265 439 aaKnown RBP7.1□□□□□ -1.27
TCF4-218ENST00000563686 PRAM1Q96QH2 718 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 ASXL2Q76L83 1435 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 CEP152O94986 1710 aa7.1□□□□□ -1.27
TCF4-218ENST00000563686 SLC12A5Q9H2X9 1139 aa7.09□□□□□ -1.27
TCF4-218ENST00000563686 GPATCH3Q96I76 525 aa7.09□□□□□ -1.27
TCF4-218ENST00000563686 ANKRD36BQ8N2N9 1353 aa7.09□□□□□ -1.28
TCF4-218ENST00000563686 SYAP1Q96A49 352 aaPredicted RBP7.08□□□□□ -1.28
TCF4-218ENST00000563686 MADDQ8WXG6 1647 aa7.08□□□□□ -1.28
TCF4-218ENST00000563686 CDC45O75419 566 aa7.08□□□□□ -1.28
TCF4-218ENST00000563686 TPRNQ4KMQ1 711 aa7.08□□□□□ -1.28
TCF4-218ENST00000563686 GCC1Q96CN9 775 aa7.08□□□□□ -1.28
TCF4-218ENST00000563686 TESK2Q96S53 571 aa7.08□□□□□ -1.28
TCF4-218ENST00000563686 C14orf93Q9H972 538 aaKnown RBP7.08□□□□□ -1.28
TCF4-218ENST00000563686 POLR3AO14802 1390 aaPredicted RBP7.08□□□□□ -1.28
TCF4-218ENST00000563686 TSR2Q969E8 191 aaKnown RBP7.08□□□□□ -1.28
TCF4-218ENST00000563686 ABCC11Q96J66 1382 aa7.08□□□□□ -1.28
TCF4-218ENST00000563686 MYOM2P54296 1465 aa7.08□□□□□ -1.28
TCF4-218ENST00000563686 TRIM6-TRIM34B2RNG4 842 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 HMOX1P09601 288 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 AMPHP49418 695 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 RARSP54136 660 aaKnown RBP7.07□□□□□ -1.28
TCF4-218ENST00000563686 INTS3Q68E01 1043 aaKnown RBP7.07□□□□□ -1.28
TCF4-218ENST00000563686 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 ZFYVE16Q7Z3T8 1539 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 CLTCL1P53675 1640 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 E9PCH4 1651 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 AMER1Q5JTC6 1135 aaPredicted RBP7.07□□□□□ -1.28
TCF4-218ENST00000563686 KIAA1211Q6ZU35 1233 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 ATP10AO60312 1499 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 NPC1L1Q9UHC9 1359 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 PLEKHG5O94827 1062 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 SLC52A1Q9NWF4 448 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.07□□□□□ -1.28
TCF4-218ENST00000563686 CHMP4AQ9BY43 222 aa7.07□□□□□ -1.28
TCF4-218ENST00000563686 PLEKHH1Q9ULM0 1364 aa7.06□□□□□ -1.28
TCF4-218ENST00000563686 CSPP1Q1MSJ5 1256 aa7.06□□□□□ -1.28
TCF4-218ENST00000563686 DNTTIP2Q5QJE6 756 aaKnown RBP7.06□□□□□ -1.28
TCF4-218ENST00000563686 GOLGA6L6A8MZA4 724 aa7.06□□□□□ -1.28
TCF4-218ENST00000563686 KCNJ4P48050 445 aa7.06□□□□□ -1.28
TCF4-218ENST00000563686 NGDNQ8NEJ9 315 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms