RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 LAMC1P11047 1609 aa27.63■■■□□ 2.01
TRADD-203ENST00000563348 KNDC1Q76NI1 1749 aa27.62■■■□□ 2.01
TRADD-203ENST00000563348 DDX17Q92841 729 aaKnown RBP27.61■■■□□ 2.01
TRADD-203ENST00000563348 PRAM1Q96QH2 718 aa27.6■■■□□ 2.01
TRADD-203ENST00000563348 LRRC59Q96AG4 307 aaKnown RBP27.59■■■□□ 2.01
TRADD-203ENST00000563348 ADGRB1O14514 1584 aa27.58■■■□□ 2.01
TRADD-203ENST00000563348 CDC42BPGQ6DT37 1551 aa27.58■■■□□ 2.01
TRADD-203ENST00000563348 SPATA31A6Q5VVP1 1343 aa27.58■■■□□ 2.01
TRADD-203ENST00000563348 POGKQ9P215 609 aa27.57■■■□□ 2
TRADD-203ENST00000563348 TRAK1Q9UPV9 953 aa27.57■■■□□ 2
TRADD-203ENST00000563348 ESCO1Q5FWF5 840 aa27.56■■■□□ 2
TRADD-203ENST00000563348 RGS17Q9UGC6 210 aaPredicted RBP27.56■■■□□ 2
TRADD-203ENST00000563348 SIN3AQ96ST3 1273 aa27.55■■■□□ 2
TRADD-203ENST00000563348 DLC1Q96QB1 1528 aa27.55■■■□□ 2
TRADD-203ENST00000563348 NUTM2FA1L443 756 aa27.54■■■□□ 2
TRADD-203ENST00000563348 SAFB2Q14151 953 aaKnown RBP eCLIP27.54■■■□□ 2
TRADD-203ENST00000563348 NHSL1Q5SYE7 1610 aa27.53■■■□□ 2
TRADD-203ENST00000563348 SOS2Q07890 1332 aaPredicted RBP27.52■■■□□ 2
TRADD-203ENST00000563348 L3MBTL2Q969R5 705 aa27.51■■□□□ 1.99
TRADD-203ENST00000563348 SOCS7O14512 581 aa27.49■■□□□ 1.99
TRADD-203ENST00000563348 NEUROD1Q13562 356 aa27.48■■□□□ 1.99
TRADD-203ENST00000563348 NPHP3Q7Z494 1330 aa27.47■■□□□ 1.99
TRADD-203ENST00000563348 SHPRHQ149N8 1683 aa27.47■■□□□ 1.99
TRADD-203ENST00000563348 FOXO3O43524 673 aa27.47■■□□□ 1.99
TRADD-203ENST00000563348 PNPLA6Q8IY17 1366 aa27.45■■□□□ 1.98
TRADD-203ENST00000563348 NUTM2BA6NNL0 878 aaPredicted RBP27.44■■□□□ 1.98
TRADD-203ENST00000563348 NUTM2EB1AL46 878 aaPredicted RBP27.44■■□□□ 1.98
TRADD-203ENST00000563348 NBPF1Q3BBV0 1214 aa27.44■■□□□ 1.98
TRADD-203ENST00000563348 MEX3CQ5U5Q3 659 aaKnown RBP27.44■■□□□ 1.98
TRADD-203ENST00000563348 NUTM2AQ8IVF1 878 aaPredicted RBP27.44■■□□□ 1.98
TRADD-203ENST00000563348 LRP6O75581 1613 aa27.44■■□□□ 1.98
TRADD-203ENST00000563348 MINK1Q8N4C8 1332 aaPredicted RBP27.42■■□□□ 1.98
TRADD-203ENST00000563348 FMN2Q9NZ56 1722 aa27.42■■□□□ 1.98
TRADD-203ENST00000563348 HIRIP3Q9BW71 556 aaPredicted RBP27.42■■□□□ 1.98
TRADD-203ENST00000563348 POTEAQ6S8J7 498 aa27.41■■□□□ 1.98
TRADD-203ENST00000563348 PHF8Q9UPP1 1060 aa27.4■■□□□ 1.98
TRADD-203ENST00000563348 XPCQ01831 940 aaPredicted RBP27.39■■□□□ 1.98
TRADD-203ENST00000563348 WASLO00401 505 aaPredicted RBP27.38■■□□□ 1.97
TRADD-203ENST00000563348 KIAA1210Q9ULL0 1709 aa27.38■■□□□ 1.97
TRADD-203ENST00000563348 PXDNQ92626 1479 aa27.37■■□□□ 1.97
TRADD-203ENST00000563348 ANKARQ7Z5J8 1434 aa27.35■■□□□ 1.97
TRADD-203ENST00000563348 KRT28Q7Z3Y7 464 aa27.35■■□□□ 1.97
TRADD-203ENST00000563348 ADGRB2O60241 1585 aa27.35■■□□□ 1.97
TRADD-203ENST00000563348 ZNF772Q68DY9 489 aaPredicted RBP27.33■■□□□ 1.97
TRADD-203ENST00000563348 EIF3AQ14152 1382 aaKnown RBP27.33■■□□□ 1.97
TRADD-203ENST00000563348 PSME1Q06323 249 aa27.31■■□□□ 1.96
TRADD-203ENST00000563348 PRR36Q9H6K5 1346 aa27.31■■□□□ 1.96
TRADD-203ENST00000563348 PMFBP1Q8TBY8 1022 aa27.3■■□□□ 1.96
TRADD-203ENST00000563348 SPATA31A3Q5VYP0 1347 aa27.3■■□□□ 1.96
TRADD-203ENST00000563348 KIF1AQ12756 1690 aa27.3■■□□□ 1.96
TRADD-203ENST00000563348 ARHGEF28Q8N1W1 1705 aaKnown RBP27.3■■□□□ 1.96
TRADD-203ENST00000563348 ADAMTS2O95450 1211 aa27.29■■□□□ 1.96
TRADD-203ENST00000563348 RGPD8O14715 1765 aaPredicted RBP27.28■■□□□ 1.96
TRADD-203ENST00000563348 C8orf37Q96NL8 207 aa27.27■■□□□ 1.96
TRADD-203ENST00000563348 CDK19Q9BWU1 502 aa27.27■■□□□ 1.96
TRADD-203ENST00000563348 AFF2P51816 1311 aa27.26■■□□□ 1.95
TRADD-203ENST00000563348 NUDT16Q96DE0 195 aaKnown RBP27.26■■□□□ 1.95
TRADD-203ENST00000563348 USP32Q8NFA0 1604 aa27.26■■□□□ 1.95
TRADD-203ENST00000563348 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.95
TRADD-203ENST00000563348 CENPJQ9HC77 1338 aaPredicted RBP27.25■■□□□ 1.95
TRADD-203ENST00000563348 NBPF8Q3BBV2 869 aa27.25■■□□□ 1.95
TRADD-203ENST00000563348 NGLY1Q96IV0 654 aa27.24■■□□□ 1.95
TRADD-203ENST00000563348 COL22A1Q8NFW1 1626 aaPredicted RBP27.23■■□□□ 1.95
TRADD-203ENST00000563348 SBNO1A3KN83 1393 aa27.22■■□□□ 1.95
TRADD-203ENST00000563348 TONSLQ96HA7 1378 aa27.22■■□□□ 1.95
TRADD-203ENST00000563348 ROCK2O75116 1388 aaKnown RBP27.21■■□□□ 1.95
TRADD-203ENST00000563348 NGDNQ8NEJ9 315 aaKnown RBP27.2■■□□□ 1.94
TRADD-203ENST00000563348 CCDC61Q9Y6R9 512 aa27.19■■□□□ 1.94
TRADD-203ENST00000563348 GPRASP1Q5JY77 1395 aa27.19■■□□□ 1.94
TRADD-203ENST00000563348 TNS3Q68CZ2 1445 aa27.18■■□□□ 1.94
TRADD-203ENST00000563348 FNBP4Q8N3X1 1017 aaPredicted RBP27.18■■□□□ 1.94
TRADD-203ENST00000563348 TRPM1Q7Z4N2 1603 aa27.17■■□□□ 1.94
TRADD-203ENST00000563348 RXRBP28702 533 aa27.17■■□□□ 1.94
TRADD-203ENST00000563348 QTRT2Q9H974 415 aaKnown RBP27.17■■□□□ 1.94
TRADD-203ENST00000563348 ATP7BP35670 1465 aa27.17■■□□□ 1.94
TRADD-203ENST00000563348 LMOD2Q6P5Q4 547 aa27.16■■□□□ 1.94
TRADD-203ENST00000563348 ARHGEF10O15013 1369 aa27.14■■□□□ 1.94
TRADD-203ENST00000563348 PLEKHG3A1L390 1219 aa27.14■■□□□ 1.94
TRADD-203ENST00000563348 SRPK2P78362 688 aaKnown RBP27.13■■□□□ 1.93
TRADD-203ENST00000563348 PCGF6Q9BYE7 350 aa27.13■■□□□ 1.93
TRADD-203ENST00000563348 USP21Q9UK80 565 aa27.13■■□□□ 1.93
TRADD-203ENST00000563348 CABLES1Q8TDN4 633 aa27.12■■□□□ 1.93
TRADD-203ENST00000563348 CABP2Q9NPB3 220 aa27.12■■□□□ 1.93
TRADD-203ENST00000563348 CARD11Q9BXL7 1154 aa27.1■■□□□ 1.93
TRADD-203ENST00000563348 HAP1P54257 671 aaPredicted RBP27.09■■□□□ 1.93
TRADD-203ENST00000563348 RBM6P78332 1123 aaKnown RBP27.09■■□□□ 1.93
TRADD-203ENST00000563348 ACEP12821 1306 aa27.09■■□□□ 1.93
TRADD-203ENST00000563348 PAK3O75914 559 aaPredicted RBP27.08■■□□□ 1.93
TRADD-203ENST00000563348 TRPC5Q9UL62 973 aaPredicted RBP27.08■■□□□ 1.93
TRADD-203ENST00000563348 POLR3AO14802 1390 aaPredicted RBP27.08■■□□□ 1.93
TRADD-203ENST00000563348 PLEKHG5O94827 1062 aa27.07■■□□□ 1.92
TRADD-203ENST00000563348 EVC2Q86UK5 1308 aa27.07■■□□□ 1.92
TRADD-203ENST00000563348 ITSN1Q15811 1721 aa27.05■■□□□ 1.92
TRADD-203ENST00000563348 TRPM3Q9HCF6 1732 aaPredicted RBP27.04■■□□□ 1.92
TRADD-203ENST00000563348 QRICH2Q9H0J4 1663 aa27.04■■□□□ 1.92
TRADD-203ENST00000563348 BCL9LQ86UU0 1499 aa27.03■■□□□ 1.92
TRADD-203ENST00000563348 RALGAPBQ86X10 1494 aa27.03■■□□□ 1.92
TRADD-203ENST00000563348 CDK12Q9NYV4 1490 aaPredicted RBP27.02■■□□□ 1.92
TRADD-203ENST00000563348 PPIP5K1Q6PFW1 1433 aa27.02■■□□□ 1.92
TRADD-203ENST00000563348 CABP1Q9NZU7 370 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms