RNA–Protein interactions for RNA: ENST00000562890.1

SCAPER-204, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 671 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-204ENST00000562890 BRINP3Q76B58 766 aa9.81□□□□□ -0.84
SCAPER-204ENST00000562890 KNDC1Q76NI1 1749 aa9.81□□□□□ -0.84
SCAPER-204ENST00000562890 MST1RQ04912 1400 aa9.81□□□□□ -0.84
SCAPER-204ENST00000562890 YTHDC2Q9H6S0 1430 aaKnown RBP9.81□□□□□ -0.84
SCAPER-204ENST00000562890 ADGRL3Q9HAR2 1447 aa9.81□□□□□ -0.84
SCAPER-204ENST00000562890 PHLPP1O60346 1717 aa9.79□□□□□ -0.84
SCAPER-204ENST00000562890 LAMC1P11047 1609 aa9.79□□□□□ -0.84
SCAPER-204ENST00000562890 SIN3AQ96ST3 1273 aa9.79□□□□□ -0.84
SCAPER-204ENST00000562890 DISP3Q9P2K9 1392 aa9.78□□□□□ -0.84
SCAPER-204ENST00000562890 PLEKHH1Q9ULM0 1364 aa9.78□□□□□ -0.84
SCAPER-204ENST00000562890 ADGRB1O14514 1584 aa9.78□□□□□ -0.84
SCAPER-204ENST00000562890 C1orf167Q5SNV9 1468 aa9.78□□□□□ -0.84
SCAPER-204ENST00000562890 ORAI2Q96SN7 254 aa9.77□□□□□ -0.85
SCAPER-204ENST00000562890 COL16A1Q07092 1604 aaPredicted RBP9.77□□□□□ -0.85
SCAPER-204ENST00000562890 AHDC1Q5TGY3 1603 aaPredicted RBP9.77□□□□□ -0.85
SCAPER-204ENST00000562890 ILDR2Q71H61 639 aa9.76□□□□□ -0.85
SCAPER-204ENST00000562890 L3MBTL2Q969R5 705 aa9.76□□□□□ -0.85
SCAPER-204ENST00000562890 DLC1Q96QB1 1528 aa9.76□□□□□ -0.85
SCAPER-204ENST00000562890 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
SCAPER-204ENST00000562890 NHSL1Q5SYE7 1610 aa9.75□□□□□ -0.85
SCAPER-204ENST00000562890 DDX17Q92841 729 aaKnown RBP9.75□□□□□ -0.85
SCAPER-204ENST00000562890 PRAM1Q96QH2 718 aa9.75□□□□□ -0.85
SCAPER-204ENST00000562890 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
SCAPER-204ENST00000562890 KIAA1210Q9ULL0 1709 aa9.75□□□□□ -0.85
SCAPER-204ENST00000562890 RGPD8O14715 1765 aaPredicted RBP9.75□□□□□ -0.85
SCAPER-204ENST00000562890 JCADQ9P266 1359 aa9.75□□□□□ -0.85
SCAPER-204ENST00000562890 NEUROD1Q13562 356 aa9.74□□□□□ -0.85
SCAPER-204ENST00000562890 NBPF1Q3BBV0 1214 aa9.74□□□□□ -0.85
SCAPER-204ENST00000562890 LRRC59Q96AG4 307 aaKnown RBP9.74□□□□□ -0.85
SCAPER-204ENST00000562890 RGS17Q9UGC6 210 aaPredicted RBP9.74□□□□□ -0.85
SCAPER-204ENST00000562890 CDC42BPGQ6DT37 1551 aa9.74□□□□□ -0.85
SCAPER-204ENST00000562890 POGKQ9P215 609 aa9.73□□□□□ -0.85
SCAPER-204ENST00000562890 SOS2Q07890 1332 aaPredicted RBP9.73□□□□□ -0.85
SCAPER-204ENST00000562890 FMN2Q9NZ56 1722 aa9.73□□□□□ -0.85
SCAPER-204ENST00000562890 SHPRHQ149N8 1683 aa9.72□□□□□ -0.85
SCAPER-204ENST00000562890 ESCO1Q5FWF5 840 aa9.72□□□□□ -0.85
SCAPER-204ENST00000562890 SPATA31A6Q5VVP1 1343 aa9.72□□□□□ -0.85
SCAPER-204ENST00000562890 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
SCAPER-204ENST00000562890 SAFB2Q14151 953 aaKnown RBP eCLIP9.71□□□□□ -0.86
SCAPER-204ENST00000562890 FOXO3O43524 673 aa9.7□□□□□ -0.86
SCAPER-204ENST00000562890 ARHGEF28Q8N1W1 1705 aaKnown RBP9.7□□□□□ -0.86
SCAPER-204ENST00000562890 WASLO00401 505 aaPredicted RBP9.69□□□□□ -0.86
SCAPER-204ENST00000562890 NBPF8Q3BBV2 869 aa9.69□□□□□ -0.86
SCAPER-204ENST00000562890 USP32Q8NFA0 1604 aa9.68□□□□□ -0.86
SCAPER-204ENST00000562890 ADGRB2O60241 1585 aa9.68□□□□□ -0.86
SCAPER-204ENST00000562890 NPHP3Q7Z494 1330 aa9.68□□□□□ -0.86
SCAPER-204ENST00000562890 MINK1Q8N4C8 1332 aaPredicted RBP9.68□□□□□ -0.86
SCAPER-204ENST00000562890 HIRIP3Q9BW71 556 aaPredicted RBP9.68□□□□□ -0.86
SCAPER-204ENST00000562890 PHF8Q9UPP1 1060 aa9.68□□□□□ -0.86
SCAPER-204ENST00000562890 LRP6O75581 1613 aa9.67□□□□□ -0.86
SCAPER-204ENST00000562890 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
SCAPER-204ENST00000562890 PNPLA6Q8IY17 1366 aa9.67□□□□□ -0.86
SCAPER-204ENST00000562890 KRT28Q7Z3Y7 464 aa9.67□□□□□ -0.86
SCAPER-204ENST00000562890 PXDNQ92626 1479 aa9.66□□□□□ -0.86
SCAPER-204ENST00000562890 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
SCAPER-204ENST00000562890 PRR36Q9H6K5 1346 aa9.66□□□□□ -0.86
SCAPER-204ENST00000562890 POTEAQ6S8J7 498 aa9.66□□□□□ -0.86
SCAPER-204ENST00000562890 CDK19Q9BWU1 502 aa9.66□□□□□ -0.86
SCAPER-204ENST00000562890 PCGF6Q9BYE7 350 aa9.66□□□□□ -0.86
SCAPER-204ENST00000562890 KIF1AQ12756 1690 aa9.65□□□□□ -0.86
SCAPER-204ENST00000562890 NUTM2BA6NNL0 878 aaPredicted RBP9.65□□□□□ -0.86
SCAPER-204ENST00000562890 NUTM2EB1AL46 878 aaPredicted RBP9.65□□□□□ -0.86
SCAPER-204ENST00000562890 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
SCAPER-204ENST00000562890 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
SCAPER-204ENST00000562890 PMFBP1Q8TBY8 1022 aa9.65□□□□□ -0.86
SCAPER-204ENST00000562890 COL22A1Q8NFW1 1626 aaPredicted RBP9.64□□□□□ -0.87
SCAPER-204ENST00000562890 SPATA31A3Q5VYP0 1347 aa9.64□□□□□ -0.87
SCAPER-204ENST00000562890 SOCS7O14512 581 aa9.64□□□□□ -0.87
SCAPER-204ENST00000562890 PSME1Q06323 249 aa9.64□□□□□ -0.87
SCAPER-204ENST00000562890 NUDT16Q96DE0 195 aaKnown RBP9.64□□□□□ -0.87
SCAPER-204ENST00000562890 TULP4Q9NRJ4 1543 aa9.63□□□□□ -0.87
SCAPER-204ENST00000562890 EIF3AQ14152 1382 aaKnown RBP9.63□□□□□ -0.87
SCAPER-204ENST00000562890 GPRASP1Q5JY77 1395 aa9.63□□□□□ -0.87
SCAPER-204ENST00000562890 CENPJQ9HC77 1338 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-204ENST00000562890 PLEKHG3A1L390 1219 aa9.62□□□□□ -0.87
SCAPER-204ENST00000562890 MEX3CQ5U5Q3 659 aaKnown RBP9.62□□□□□ -0.87
SCAPER-204ENST00000562890 ZNF772Q68DY9 489 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-204ENST00000562890 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
SCAPER-204ENST00000562890 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
SCAPER-204ENST00000562890 TONSLQ96HA7 1378 aa9.62□□□□□ -0.87
SCAPER-204ENST00000562890 RNF39Q9H2S5 420 aa9.61□□□□□ -0.87
SCAPER-204ENST00000562890 ROCK2O75116 1388 aaKnown RBP9.61□□□□□ -0.87
SCAPER-204ENST00000562890 ATP7BP35670 1465 aa9.6□□□□□ -0.87
SCAPER-204ENST00000562890 TRPM3Q9HCF6 1732 aaPredicted RBP9.6□□□□□ -0.87
SCAPER-204ENST00000562890 MARF1Q9Y4F3 1742 aaKnown RBP9.6□□□□□ -0.87
SCAPER-204ENST00000562890 ADAMTS2O95450 1211 aa9.6□□□□□ -0.87
SCAPER-204ENST00000562890 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
SCAPER-204ENST00000562890 CABP2Q9NPB3 220 aa9.6□□□□□ -0.87
SCAPER-204ENST00000562890 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
SCAPER-204ENST00000562890 QRICH2Q9H0J4 1663 aa9.6□□□□□ -0.87
SCAPER-204ENST00000562890 ITSN1Q15811 1721 aa9.59□□□□□ -0.87
SCAPER-204ENST00000562890 AFF2P51816 1311 aa9.59□□□□□ -0.87
SCAPER-204ENST00000562890 CLSPNQ9HAW4 1339 aa9.59□□□□□ -0.87
SCAPER-204ENST00000562890 NGDNQ8NEJ9 315 aaKnown RBP9.59□□□□□ -0.87
SCAPER-204ENST00000562890 NGLY1Q96IV0 654 aa9.59□□□□□ -0.87
SCAPER-204ENST00000562890 C8orf37Q96NL8 207 aa9.59□□□□□ -0.87
SCAPER-204ENST00000562890 CARD11Q9BXL7 1154 aa9.59□□□□□ -0.87
SCAPER-204ENST00000562890 POLR3AO14802 1390 aaPredicted RBP9.59□□□□□ -0.87
SCAPER-204ENST00000562890 ACEP12821 1306 aa9.58□□□□□ -0.88
SCAPER-204ENST00000562890 TOPAZ1Q8N9V7 1692 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms