RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 SHPRHQ149N8 1683 aa27.67■■■□□ 2.02
MAP1LC3B-203ENST00000562778 KDM2AQ9Y2K7 1162 aa27.65■■■□□ 2.02
MAP1LC3B-203ENST00000562778 CDC42BPGQ6DT37 1551 aa27.64■■■□□ 2.01
MAP1LC3B-203ENST00000562778 SPATA31A6Q5VVP1 1343 aa27.64■■■□□ 2.01
MAP1LC3B-203ENST00000562778 POTEAQ6S8J7 498 aa27.63■■■□□ 2.01
MAP1LC3B-203ENST00000562778 DCAF11Q8TEB1 546 aa27.63■■■□□ 2.01
MAP1LC3B-203ENST00000562778 LAMC1P11047 1609 aa27.63■■■□□ 2.01
MAP1LC3B-203ENST00000562778 NUTM2FA1L443 756 aa27.62■■■□□ 2.01
MAP1LC3B-203ENST00000562778 NUTM2BA6NNL0 878 aaPredicted RBP27.6■■■□□ 2.01
MAP1LC3B-203ENST00000562778 NUTM2EB1AL46 878 aaPredicted RBP27.6■■■□□ 2.01
MAP1LC3B-203ENST00000562778 NUTM2AQ8IVF1 878 aaPredicted RBP27.6■■■□□ 2.01
MAP1LC3B-203ENST00000562778 DHX57Q6P158 1386 aaKnown RBP27.6■■■□□ 2.01
MAP1LC3B-203ENST00000562778 LRRC59Q96AG4 307 aaKnown RBP27.59■■■□□ 2.01
MAP1LC3B-203ENST00000562778 MEX3CQ5U5Q3 659 aaKnown RBP27.58■■■□□ 2.01
MAP1LC3B-203ENST00000562778 ESCO1Q5FWF5 840 aa27.57■■■□□ 2
MAP1LC3B-203ENST00000562778 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
MAP1LC3B-203ENST00000562778 PNPLA6Q8IY17 1366 aa27.55■■■□□ 2
MAP1LC3B-203ENST00000562778 ADGRB1O14514 1584 aa27.55■■■□□ 2
MAP1LC3B-203ENST00000562778 SIRT1Q96EB6 747 aa27.54■■■□□ 2
MAP1LC3B-203ENST00000562778 PRAM1Q96QH2 718 aa27.54■■■□□ 2
MAP1LC3B-203ENST00000562778 SOS2Q07890 1332 aaPredicted RBP27.53■■■□□ 2
MAP1LC3B-203ENST00000562778 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
MAP1LC3B-203ENST00000562778 XPCQ01831 940 aaPredicted RBP27.5■■□□□ 1.99
MAP1LC3B-203ENST00000562778 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
MAP1LC3B-203ENST00000562778 DLC1Q96QB1 1528 aa27.48■■□□□ 1.99
MAP1LC3B-203ENST00000562778 FOXO3O43524 673 aa27.48■■□□□ 1.99
MAP1LC3B-203ENST00000562778 POGKQ9P215 609 aa27.48■■□□□ 1.99
MAP1LC3B-203ENST00000562778 PXDNQ92626 1479 aa27.45■■□□□ 1.99
MAP1LC3B-203ENST00000562778 NPHP3Q7Z494 1330 aa27.45■■□□□ 1.99
MAP1LC3B-203ENST00000562778 STAC3Q96MF2 364 aa27.45■■□□□ 1.98
MAP1LC3B-203ENST00000562778 RGPD8O14715 1765 aaPredicted RBP27.45■■□□□ 1.98
MAP1LC3B-203ENST00000562778 ADAMTS2O95450 1211 aa27.42■■□□□ 1.98
MAP1LC3B-203ENST00000562778 ZNF772Q68DY9 489 aaPredicted RBP27.42■■□□□ 1.98
MAP1LC3B-203ENST00000562778 HIRIP3Q9BW71 556 aaPredicted RBP27.42■■□□□ 1.98
MAP1LC3B-203ENST00000562778 C8orf37Q96NL8 207 aa27.41■■□□□ 1.98
MAP1LC3B-203ENST00000562778 AFF2P51816 1311 aa27.41■■□□□ 1.98
MAP1LC3B-203ENST00000562778 MINK1Q8N4C8 1332 aaPredicted RBP27.4■■□□□ 1.98
MAP1LC3B-203ENST00000562778 KIF1AQ12756 1690 aa27.37■■□□□ 1.97
MAP1LC3B-203ENST00000562778 ADGRB2O60241 1585 aa27.36■■□□□ 1.97
MAP1LC3B-203ENST00000562778 SIN3AQ96ST3 1273 aa27.36■■□□□ 1.97
MAP1LC3B-203ENST00000562778 PHF8Q9UPP1 1060 aa27.36■■□□□ 1.97
MAP1LC3B-203ENST00000562778 USP32Q8NFA0 1604 aa27.36■■□□□ 1.97
MAP1LC3B-203ENST00000562778 COL22A1Q8NFW1 1626 aaPredicted RBP27.36■■□□□ 1.97
MAP1LC3B-203ENST00000562778 ARHGEF28Q8N1W1 1705 aaKnown RBP27.35■■□□□ 1.97
MAP1LC3B-203ENST00000562778 KRT28Q7Z3Y7 464 aa27.34■■□□□ 1.97
MAP1LC3B-203ENST00000562778 NBPF1Q3BBV0 1214 aa27.33■■□□□ 1.97
MAP1LC3B-203ENST00000562778 PMFBP1Q8TBY8 1022 aa27.32■■□□□ 1.96
MAP1LC3B-203ENST00000562778 NGLY1Q96IV0 654 aa27.32■■□□□ 1.96
MAP1LC3B-203ENST00000562778 KIAA1210Q9ULL0 1709 aa27.3■■□□□ 1.96
MAP1LC3B-203ENST00000562778 L3MBTL2Q969R5 705 aa27.3■■□□□ 1.96
MAP1LC3B-203ENST00000562778 SPATA31A3Q5VYP0 1347 aa27.3■■□□□ 1.96
MAP1LC3B-203ENST00000562778 PRR36Q9H6K5 1346 aa27.3■■□□□ 1.96
MAP1LC3B-203ENST00000562778 ANKARQ7Z5J8 1434 aa27.3■■□□□ 1.96
MAP1LC3B-203ENST00000562778 NEUROD1Q13562 356 aa27.29■■□□□ 1.96
MAP1LC3B-203ENST00000562778 WASLO00401 505 aaPredicted RBP27.28■■□□□ 1.96
MAP1LC3B-203ENST00000562778 RXRBP28702 533 aa27.28■■□□□ 1.96
MAP1LC3B-203ENST00000562778 QTRT2Q9H974 415 aaKnown RBP27.26■■□□□ 1.95
MAP1LC3B-203ENST00000562778 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.95
MAP1LC3B-203ENST00000562778 PLEKHG5O94827 1062 aa27.25■■□□□ 1.95
MAP1LC3B-203ENST00000562778 PSME1Q06323 249 aa27.25■■□□□ 1.95
MAP1LC3B-203ENST00000562778 TNS3Q68CZ2 1445 aa27.23■■□□□ 1.95
MAP1LC3B-203ENST00000562778 USP21Q9UK80 565 aa27.22■■□□□ 1.95
MAP1LC3B-203ENST00000562778 LMOD2Q6P5Q4 547 aa27.21■■□□□ 1.95
MAP1LC3B-203ENST00000562778 FNBP4Q8N3X1 1017 aaPredicted RBP27.21■■□□□ 1.95
MAP1LC3B-203ENST00000562778 EIF3AQ14152 1382 aaKnown RBP27.21■■□□□ 1.95
MAP1LC3B-203ENST00000562778 CABLES1Q8TDN4 633 aa27.2■■□□□ 1.94
MAP1LC3B-203ENST00000562778 MARF1Q9Y4F3 1742 aaKnown RBP27.2■■□□□ 1.94
MAP1LC3B-203ENST00000562778 SBNO1A3KN83 1393 aa27.19■■□□□ 1.94
MAP1LC3B-203ENST00000562778 RBM6P78332 1123 aaKnown RBP27.18■■□□□ 1.94
MAP1LC3B-203ENST00000562778 CDK19Q9BWU1 502 aa27.18■■□□□ 1.94
MAP1LC3B-203ENST00000562778 ATP7BP35670 1465 aa27.18■■□□□ 1.94
MAP1LC3B-203ENST00000562778 NUDT16Q96DE0 195 aaKnown RBP27.17■■□□□ 1.94
MAP1LC3B-203ENST00000562778 TRIM26Q12899 539 aaPredicted RBP27.16■■□□□ 1.94
MAP1LC3B-203ENST00000562778 TRPM3Q9HCF6 1732 aaPredicted RBP27.16■■□□□ 1.94
MAP1LC3B-203ENST00000562778 RGS12O14924 1447 aa27.16■■□□□ 1.94
MAP1LC3B-203ENST00000562778 CDK12Q9NYV4 1490 aaPredicted RBP27.15■■□□□ 1.94
MAP1LC3B-203ENST00000562778 NGDNQ8NEJ9 315 aaKnown RBP27.14■■□□□ 1.94
MAP1LC3B-203ENST00000562778 BCL9LQ86UU0 1499 aa27.13■■□□□ 1.93
MAP1LC3B-203ENST00000562778 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
MAP1LC3B-203ENST00000562778 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
MAP1LC3B-203ENST00000562778 TRPC5Q9UL62 973 aaPredicted RBP27.13■■□□□ 1.93
MAP1LC3B-203ENST00000562778 TRPM1Q7Z4N2 1603 aa27.12■■□□□ 1.93
MAP1LC3B-203ENST00000562778 CENPJQ9HC77 1338 aaPredicted RBP27.12■■□□□ 1.93
MAP1LC3B-203ENST00000562778 ARHGEF10O15013 1369 aa27.11■■□□□ 1.93
MAP1LC3B-203ENST00000562778 ITSN1Q15811 1721 aa27.11■■□□□ 1.93
MAP1LC3B-203ENST00000562778 ABCA3Q99758 1704 aa27.11■■□□□ 1.93
MAP1LC3B-203ENST00000562778 ATRNO75882 1429 aa27.11■■□□□ 1.93
MAP1LC3B-203ENST00000562778 ALS2Q96Q42 1657 aa27.09■■□□□ 1.93
MAP1LC3B-203ENST00000562778 NBPF8Q3BBV2 869 aa27.08■■□□□ 1.93
MAP1LC3B-203ENST00000562778 TOPAZ1Q8N9V7 1692 aa27.08■■□□□ 1.92
MAP1LC3B-203ENST00000562778 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.92
MAP1LC3B-203ENST00000562778 SLIT2O94813 1529 aa27.07■■□□□ 1.92
MAP1LC3B-203ENST00000562778 PAK3O75914 559 aaPredicted RBP27.07■■□□□ 1.92
MAP1LC3B-203ENST00000562778 UPF1Q92900 1129 aaKnown RBP eCLIP27.06■■□□□ 1.92
MAP1LC3B-203ENST00000562778 SRPK2P78362 688 aaKnown RBP27.05■■□□□ 1.92
MAP1LC3B-203ENST00000562778 CABP2Q9NPB3 220 aa27.05■■□□□ 1.92
MAP1LC3B-203ENST00000562778 CCDC61Q9Y6R9 512 aa27.05■■□□□ 1.92
MAP1LC3B-203ENST00000562778 ROCK2O75116 1388 aaKnown RBP27.05■■□□□ 1.92
MAP1LC3B-203ENST00000562778 ACEP12821 1306 aa27.03■■□□□ 1.92
MAP1LC3B-203ENST00000562778 UNC5CLQ8IV45 518 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms