RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CDC42BPGQ6DT37 1551 aa22.29■■□□□ 1.16
CCNDBP1-203ENST00000562553 COL16A1Q07092 1604 aaPredicted RBP22.29■■□□□ 1.16
CCNDBP1-203ENST00000562553 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
CCNDBP1-203ENST00000562553 JCADQ9P266 1359 aa22.28■■□□□ 1.16
CCNDBP1-203ENST00000562553 DLC1Q96QB1 1528 aa22.28■■□□□ 1.16
CCNDBP1-203ENST00000562553 BRINP3Q76B58 766 aa22.28■■□□□ 1.16
CCNDBP1-203ENST00000562553 L3MBTL2Q969R5 705 aa22.27■■□□□ 1.16
CCNDBP1-203ENST00000562553 AHDC1Q5TGY3 1603 aaPredicted RBP22.27■■□□□ 1.16
CCNDBP1-203ENST00000562553 C1orf167Q5SNV9 1468 aa22.27■■□□□ 1.16
CCNDBP1-203ENST00000562553 SIRT1Q96EB6 747 aa22.25■■□□□ 1.15
CCNDBP1-203ENST00000562553 NHSL1Q5SYE7 1610 aa22.24■■□□□ 1.15
CCNDBP1-203ENST00000562553 ARHGEF28Q8N1W1 1705 aaKnown RBP22.24■■□□□ 1.15
CCNDBP1-203ENST00000562553 PRAM1Q96QH2 718 aa22.24■■□□□ 1.15
CCNDBP1-203ENST00000562553 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
CCNDBP1-203ENST00000562553 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
CCNDBP1-203ENST00000562553 FMN2Q9NZ56 1722 aa22.23■■□□□ 1.15
CCNDBP1-203ENST00000562553 SAFB2Q14151 953 aaKnown RBP eCLIP22.22■■□□□ 1.15
CCNDBP1-203ENST00000562553 SHPRHQ149N8 1683 aa22.2■■□□□ 1.14
CCNDBP1-203ENST00000562553 NBPF1Q3BBV0 1214 aa22.19■■□□□ 1.14
CCNDBP1-203ENST00000562553 POTEAQ6S8J7 498 aa22.19■■□□□ 1.14
CCNDBP1-203ENST00000562553 ORAI2Q96SN7 254 aa22.19■■□□□ 1.14
CCNDBP1-203ENST00000562553 SPATA31A6Q5VVP1 1343 aa22.19■■□□□ 1.14
CCNDBP1-203ENST00000562553 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
CCNDBP1-203ENST00000562553 DDX17Q92841 729 aaKnown RBP22.18■■□□□ 1.14
CCNDBP1-203ENST00000562553 POGKQ9P215 609 aa22.18■■□□□ 1.14
CCNDBP1-203ENST00000562553 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
CCNDBP1-203ENST00000562553 ADGRB2O60241 1585 aa22.17■■□□□ 1.14
CCNDBP1-203ENST00000562553 NUTM2FA1L443 756 aa22.17■■□□□ 1.14
CCNDBP1-203ENST00000562553 LRP6O75581 1613 aa22.13■■□□□ 1.13
CCNDBP1-203ENST00000562553 MINK1Q8N4C8 1332 aaPredicted RBP22.12■■□□□ 1.13
CCNDBP1-203ENST00000562553 ESCO1Q5FWF5 840 aa22.12■■□□□ 1.13
CCNDBP1-203ENST00000562553 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
CCNDBP1-203ENST00000562553 USP32Q8NFA0 1604 aa22.12■■□□□ 1.13
CCNDBP1-203ENST00000562553 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
CCNDBP1-203ENST00000562553 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
CCNDBP1-203ENST00000562553 KIF1AQ12756 1690 aa22.08■■□□□ 1.13
CCNDBP1-203ENST00000562553 SOS2Q07890 1332 aaPredicted RBP22.06■■□□□ 1.12
CCNDBP1-203ENST00000562553 LRRC59Q96AG4 307 aaKnown RBP22.06■■□□□ 1.12
CCNDBP1-203ENST00000562553 PXDNQ92626 1479 aa22.05■■□□□ 1.12
CCNDBP1-203ENST00000562553 ROCK2O75116 1388 aaKnown RBP22.05■■□□□ 1.12
CCNDBP1-203ENST00000562553 ZNF772Q68DY9 489 aaPredicted RBP22.05■■□□□ 1.12
CCNDBP1-203ENST00000562553 TULP4Q9NRJ4 1543 aa22.05■■□□□ 1.12
CCNDBP1-203ENST00000562553 ANKARQ7Z5J8 1434 aa22.05■■□□□ 1.12
CCNDBP1-203ENST00000562553 QRICH2Q9H0J4 1663 aa22.04■■□□□ 1.12
CCNDBP1-203ENST00000562553 FOXO3O43524 673 aa22.04■■□□□ 1.12
CCNDBP1-203ENST00000562553 MEX3CQ5U5Q3 659 aaKnown RBP22.04■■□□□ 1.12
CCNDBP1-203ENST00000562553 PRR36Q9H6K5 1346 aa22.04■■□□□ 1.12
CCNDBP1-203ENST00000562553 PNPLA6Q8IY17 1366 aa22.03■■□□□ 1.12
CCNDBP1-203ENST00000562553 WASLO00401 505 aaPredicted RBP22.03■■□□□ 1.12
CCNDBP1-203ENST00000562553 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
CCNDBP1-203ENST00000562553 NPHP3Q7Z494 1330 aa22.03■■□□□ 1.12
CCNDBP1-203ENST00000562553 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
CCNDBP1-203ENST00000562553 PHF8Q9UPP1 1060 aa22.01■■□□□ 1.11
CCNDBP1-203ENST00000562553 RALGAPBQ86X10 1494 aa22.01■■□□□ 1.11
CCNDBP1-203ENST00000562553 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
CCNDBP1-203ENST00000562553 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
CCNDBP1-203ENST00000562553 ATP7BP35670 1465 aa21.99■■□□□ 1.11
CCNDBP1-203ENST00000562553 ITSN1Q15811 1721 aa21.98■■□□□ 1.11
CCNDBP1-203ENST00000562553 NUTM2BA6NNL0 878 aaPredicted RBP21.97■■□□□ 1.11
CCNDBP1-203ENST00000562553 NUTM2EB1AL46 878 aaPredicted RBP21.97■■□□□ 1.11
CCNDBP1-203ENST00000562553 NUTM2AQ8IVF1 878 aaPredicted RBP21.97■■□□□ 1.11
CCNDBP1-203ENST00000562553 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
CCNDBP1-203ENST00000562553 COL22A1Q8NFW1 1626 aaPredicted RBP21.97■■□□□ 1.11
CCNDBP1-203ENST00000562553 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
CCNDBP1-203ENST00000562553 CDK19Q9BWU1 502 aa21.96■■□□□ 1.11
CCNDBP1-203ENST00000562553 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
CCNDBP1-203ENST00000562553 KRT28Q7Z3Y7 464 aa21.94■■□□□ 1.1
CCNDBP1-203ENST00000562553 NUDT16Q96DE0 195 aaKnown RBP21.94■■□□□ 1.1
CCNDBP1-203ENST00000562553 CARD11Q9BXL7 1154 aa21.93■■□□□ 1.1
CCNDBP1-203ENST00000562553 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
CCNDBP1-203ENST00000562553 CDK12Q9NYV4 1490 aaPredicted RBP21.91■■□□□ 1.1
CCNDBP1-203ENST00000562553 AFF2P51816 1311 aa21.91■■□□□ 1.1
CCNDBP1-203ENST00000562553 SPATA31A3Q5VYP0 1347 aa21.91■■□□□ 1.1
CCNDBP1-203ENST00000562553 RXRBP28702 533 aa21.91■■□□□ 1.1
CCNDBP1-203ENST00000562553 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
CCNDBP1-203ENST00000562553 TNS3Q68CZ2 1445 aa21.89■■□□□ 1.1
CCNDBP1-203ENST00000562553 PSME1Q06323 249 aa21.88■■□□□ 1.09
CCNDBP1-203ENST00000562553 CABP2Q9NPB3 220 aa21.88■■□□□ 1.09
CCNDBP1-203ENST00000562553 SBNO1A3KN83 1393 aa21.87■■□□□ 1.09
CCNDBP1-203ENST00000562553 SRPK2P78362 688 aaKnown RBP21.87■■□□□ 1.09
CCNDBP1-203ENST00000562553 ALS2Q96Q42 1657 aa21.86■■□□□ 1.09
CCNDBP1-203ENST00000562553 NGDNQ8NEJ9 315 aaKnown RBP21.86■■□□□ 1.09
CCNDBP1-203ENST00000562553 ADAMTS2O95450 1211 aa21.85■■□□□ 1.09
CCNDBP1-203ENST00000562553 C8orf37Q96NL8 207 aa21.85■■□□□ 1.09
CCNDBP1-203ENST00000562553 CCDC61Q9Y6R9 512 aa21.85■■□□□ 1.09
CCNDBP1-203ENST00000562553 ABCA3Q99758 1704 aa21.85■■□□□ 1.09
CCNDBP1-203ENST00000562553 MARF1Q9Y4F3 1742 aaKnown RBP21.85■■□□□ 1.09
CCNDBP1-203ENST00000562553 EVC2Q86UK5 1308 aa21.83■■□□□ 1.09
CCNDBP1-203ENST00000562553 PPIP5K1Q6PFW1 1433 aa21.83■■□□□ 1.09
CCNDBP1-203ENST00000562553 QTRT2Q9H974 415 aaKnown RBP21.83■■□□□ 1.09
CCNDBP1-203ENST00000562553 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.09
CCNDBP1-203ENST00000562553 POLR3AO14802 1390 aaPredicted RBP21.83■■□□□ 1.08
CCNDBP1-203ENST00000562553 UPF1Q92900 1129 aaKnown RBP eCLIP21.82■■□□□ 1.08
CCNDBP1-203ENST00000562553 SBNO2Q9Y2G9 1366 aa21.82■■□□□ 1.08
CCNDBP1-203ENST00000562553 ACEP12821 1306 aa21.81■■□□□ 1.08
CCNDBP1-203ENST00000562553 PLEKHG3A1L390 1219 aa21.81■■□□□ 1.08
CCNDBP1-203ENST00000562553 RBM6P78332 1123 aaKnown RBP21.81■■□□□ 1.08
CCNDBP1-203ENST00000562553 LMOD2Q6P5Q4 547 aa21.81■■□□□ 1.08
CCNDBP1-203ENST00000562553 NGLY1Q96IV0 654 aa21.81■■□□□ 1.08
CCNDBP1-203ENST00000562553 ARHGEF10O15013 1369 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms