RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 ADGRL3Q9HAR2 1447 aa23.62■■□□□ 1.37
PKD1-226ENST00000562425 SHPRHQ149N8 1683 aa23.62■■□□□ 1.37
PKD1-226ENST00000562425 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
PKD1-226ENST00000562425 ZNF772Q68DY9 489 aaPredicted RBP23.58■■□□□ 1.37
PKD1-226ENST00000562425 WAPLQ7Z5K2 1190 aa23.58■■□□□ 1.37
PKD1-226ENST00000562425 LRP6O75581 1613 aa23.58■■□□□ 1.36
PKD1-226ENST00000562425 MEX3CQ5U5Q3 659 aaKnown RBP23.56■■□□□ 1.36
PKD1-226ENST00000562425 KNDC1Q76NI1 1749 aa23.56■■□□□ 1.36
PKD1-226ENST00000562425 TONSLQ96HA7 1378 aa23.55■■□□□ 1.36
PKD1-226ENST00000562425 POGKQ9P215 609 aa23.55■■□□□ 1.36
PKD1-226ENST00000562425 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
PKD1-226ENST00000562425 TRAK1Q9UPV9 953 aa23.54■■□□□ 1.36
PKD1-226ENST00000562425 BRINP3Q76B58 766 aa23.53■■□□□ 1.36
PKD1-226ENST00000562425 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
PKD1-226ENST00000562425 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
PKD1-226ENST00000562425 DLC1Q96QB1 1528 aa23.52■■□□□ 1.36
PKD1-226ENST00000562425 NALCNQ8IZF0 1738 aa23.51■■□□□ 1.35
PKD1-226ENST00000562425 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
PKD1-226ENST00000562425 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
PKD1-226ENST00000562425 MST1RQ04912 1400 aa23.5■■□□□ 1.35
PKD1-226ENST00000562425 NBPF1Q3BBV0 1214 aa23.48■■□□□ 1.35
PKD1-226ENST00000562425 NHSL1Q5SYE7 1610 aa23.48■■□□□ 1.35
PKD1-226ENST00000562425 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
PKD1-226ENST00000562425 CDK12Q9NYV4 1490 aaPredicted RBP23.46■■□□□ 1.35
PKD1-226ENST00000562425 CCER1Q8TC90 406 aaPredicted RBP23.45■■□□□ 1.34
PKD1-226ENST00000562425 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
PKD1-226ENST00000562425 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
PKD1-226ENST00000562425 RXRBP28702 533 aa23.42■■□□□ 1.34
PKD1-226ENST00000562425 LRRC59Q96AG4 307 aaKnown RBP23.42■■□□□ 1.34
PKD1-226ENST00000562425 TIMELESSQ9UNS1 1208 aa23.42■■□□□ 1.34
PKD1-226ENST00000562425 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
PKD1-226ENST00000562425 NBPF8Q3BBV2 869 aa23.4■■□□□ 1.34
PKD1-226ENST00000562425 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
PKD1-226ENST00000562425 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.34
PKD1-226ENST00000562425 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
PKD1-226ENST00000562425 ORAI2Q96SN7 254 aa23.39■■□□□ 1.33
PKD1-226ENST00000562425 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
PKD1-226ENST00000562425 NUTM2BA6NNL0 878 aaPredicted RBP23.38■■□□□ 1.33
PKD1-226ENST00000562425 NUTM2EB1AL46 878 aaPredicted RBP23.38■■□□□ 1.33
PKD1-226ENST00000562425 NUTM2AQ8IVF1 878 aaPredicted RBP23.38■■□□□ 1.33
PKD1-226ENST00000562425 AFF2P51816 1311 aa23.37■■□□□ 1.33
PKD1-226ENST00000562425 HIRIP3Q9BW71 556 aaPredicted RBP23.36■■□□□ 1.33
PKD1-226ENST00000562425 EIF3AQ14152 1382 aaKnown RBP23.36■■□□□ 1.33
PKD1-226ENST00000562425 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
PKD1-226ENST00000562425 PNPLA6Q8IY17 1366 aa23.35■■□□□ 1.33
PKD1-226ENST00000562425 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
PKD1-226ENST00000562425 WASLO00401 505 aaPredicted RBP23.34■■□□□ 1.33
PKD1-226ENST00000562425 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.33
PKD1-226ENST00000562425 ADGRB2O60241 1585 aa23.33■■□□□ 1.33
PKD1-226ENST00000562425 FMN2Q9NZ56 1722 aa23.33■■□□□ 1.32
PKD1-226ENST00000562425 GPRASP1Q5JY77 1395 aa23.32■■□□□ 1.32
PKD1-226ENST00000562425 CARD11Q9BXL7 1154 aa23.32■■□□□ 1.32
PKD1-226ENST00000562425 ANKARQ7Z5J8 1434 aa23.31■■□□□ 1.32
PKD1-226ENST00000562425 NPHP3Q7Z494 1330 aa23.31■■□□□ 1.32
PKD1-226ENST00000562425 DDX17Q92841 729 aaKnown RBP23.29■■□□□ 1.32
PKD1-226ENST00000562425 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
PKD1-226ENST00000562425 FOXO3O43524 673 aa23.28■■□□□ 1.32
PKD1-226ENST00000562425 RBM6P78332 1123 aaKnown RBP23.28■■□□□ 1.32
PKD1-226ENST00000562425 C8orf37Q96NL8 207 aa23.28■■□□□ 1.32
PKD1-226ENST00000562425 PHF8Q9UPP1 1060 aa23.28■■□□□ 1.32
PKD1-226ENST00000562425 CDK19Q9BWU1 502 aa23.27■■□□□ 1.32
PKD1-226ENST00000562425 SOS2Q07890 1332 aaPredicted RBP23.27■■□□□ 1.32
PKD1-226ENST00000562425 QTRT2Q9H974 415 aaKnown RBP23.25■■□□□ 1.31
PKD1-226ENST00000562425 RGS12O14924 1447 aa23.25■■□□□ 1.31
PKD1-226ENST00000562425 TULP4Q9NRJ4 1543 aa23.23■■□□□ 1.31
PKD1-226ENST00000562425 NUDT16Q96DE0 195 aaKnown RBP23.23■■□□□ 1.31
PKD1-226ENST00000562425 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
PKD1-226ENST00000562425 KIF1AQ12756 1690 aa23.22■■□□□ 1.31
PKD1-226ENST00000562425 SRPK2P78362 688 aaKnown RBP23.21■■□□□ 1.31
PKD1-226ENST00000562425 PSME1Q06323 249 aa23.21■■□□□ 1.31
PKD1-226ENST00000562425 PRR36Q9H6K5 1346 aa23.21■■□□□ 1.31
PKD1-226ENST00000562425 EVC2Q86UK5 1308 aa23.2■■□□□ 1.3
PKD1-226ENST00000562425 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
PKD1-226ENST00000562425 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
PKD1-226ENST00000562425 CCDC61Q9Y6R9 512 aa23.2■■□□□ 1.3
PKD1-226ENST00000562425 COL22A1Q8NFW1 1626 aaPredicted RBP23.19■■□□□ 1.3
PKD1-226ENST00000562425 XPCQ01831 940 aaPredicted RBP23.19■■□□□ 1.3
PKD1-226ENST00000562425 ADAMTS2O95450 1211 aa23.18■■□□□ 1.3
PKD1-226ENST00000562425 QRICH2Q9H0J4 1663 aa23.18■■□□□ 1.3
PKD1-226ENST00000562425 USP32Q8NFA0 1604 aa23.18■■□□□ 1.3
PKD1-226ENST00000562425 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
PKD1-226ENST00000562425 PXDNQ92626 1479 aa23.17■■□□□ 1.3
PKD1-226ENST00000562425 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
PKD1-226ENST00000562425 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
PKD1-226ENST00000562425 CABP2Q9NPB3 220 aa23.15■■□□□ 1.3
PKD1-226ENST00000562425 TRPC5Q9UL62 973 aaPredicted RBP23.15■■□□□ 1.3
PKD1-226ENST00000562425 ATP7BP35670 1465 aa23.15■■□□□ 1.3
PKD1-226ENST00000562425 ATAD2Q6PL18 1390 aa23.14■■□□□ 1.3
PKD1-226ENST00000562425 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.3
PKD1-226ENST00000562425 FNBP4Q8N3X1 1017 aaPredicted RBP23.14■■□□□ 1.29
PKD1-226ENST00000562425 USP21Q9UK80 565 aa23.14■■□□□ 1.29
PKD1-226ENST00000562425 SPATA31A3Q5VYP0 1347 aa23.12■■□□□ 1.29
PKD1-226ENST00000562425 PLEKHG3A1L390 1219 aa23.12■■□□□ 1.29
PKD1-226ENST00000562425 ATRNO75882 1429 aa23.11■■□□□ 1.29
PKD1-226ENST00000562425 SBNO1A3KN83 1393 aa23.11■■□□□ 1.29
PKD1-226ENST00000562425 ITSN1Q15811 1721 aa23.11■■□□□ 1.29
PKD1-226ENST00000562425 ST20-MTHFSA0A0A6YYL1 179 aa23.09■■□□□ 1.29
PKD1-226ENST00000562425 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.29
PKD1-226ENST00000562425 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
PKD1-226ENST00000562425 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms