RNA–Protein interactions for RNA: ENST00000561790.1

RAB43P1-201, Transcript of RAB43 pseudogene 1, humanhuman

BASIC

Gene RAB43P1, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43P1-201ENST00000561790 STK26Q9P289 416 aa22.89■■□□□ 1.25
RAB43P1-201ENST00000561790 RGS12O14924 1447 aa22.89■■□□□ 1.25
RAB43P1-201ENST00000561790 ADGRF5Q8IZF2 1346 aa22.88■■□□□ 1.25
RAB43P1-201ENST00000561790 USP21Q9UK80 565 aa22.88■■□□□ 1.25
RAB43P1-201ENST00000561790 NPHP3Q7Z494 1330 aa22.87■■□□□ 1.25
RAB43P1-201ENST00000561790 MPHOSPH9Q99550 1183 aa22.85■■□□□ 1.25
RAB43P1-201ENST00000561790 ANKRD30BQ9BXX2 1392 aa22.85■■□□□ 1.25
RAB43P1-201ENST00000561790 CDC42BPGQ6DT37 1551 aa22.84■■□□□ 1.25
RAB43P1-201ENST00000561790 TRPC5Q9UL62 973 aaPredicted RBP22.84■■□□□ 1.25
RAB43P1-201ENST00000561790 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
RAB43P1-201ENST00000561790 LRPPRCP42704 1394 aaKnown RBP22.82■■□□□ 1.24
RAB43P1-201ENST00000561790 NUTM2FA1L443 756 aa22.82■■□□□ 1.24
RAB43P1-201ENST00000561790 FOXO3O43524 673 aa22.82■■□□□ 1.24
RAB43P1-201ENST00000561790 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
RAB43P1-201ENST00000561790 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
RAB43P1-201ENST00000561790 TMEM132EQ6IEE7 984 aa22.81■■□□□ 1.24
RAB43P1-201ENST00000561790 FNBP4Q8N3X1 1017 aaPredicted RBP22.81■■□□□ 1.24
RAB43P1-201ENST00000561790 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
RAB43P1-201ENST00000561790 ABCC11Q96J66 1382 aa22.79■■□□□ 1.24
RAB43P1-201ENST00000561790 TECPR2O15040 1411 aa22.79■■□□□ 1.24
RAB43P1-201ENST00000561790 PXDNQ92626 1479 aa22.78■■□□□ 1.24
RAB43P1-201ENST00000561790 ATAD2Q6PL18 1390 aa22.77■■□□□ 1.24
RAB43P1-201ENST00000561790 MYOM2P54296 1465 aa22.77■■□□□ 1.24
RAB43P1-201ENST00000561790 PLEKHH1Q9ULM0 1364 aa22.76■■□□□ 1.23
RAB43P1-201ENST00000561790 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
RAB43P1-201ENST00000561790 ATRNO75882 1429 aa22.75■■□□□ 1.23
RAB43P1-201ENST00000561790 IFT172Q9UG01 1749 aa22.75■■□□□ 1.23
RAB43P1-201ENST00000561790 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
RAB43P1-201ENST00000561790 YTHDC2Q9H6S0 1430 aaKnown RBP22.74■■□□□ 1.23
RAB43P1-201ENST00000561790 KNDC1Q76NI1 1749 aa22.73■■□□□ 1.23
RAB43P1-201ENST00000561790 SIRT1Q96EB6 747 aa22.7■■□□□ 1.22
RAB43P1-201ENST00000561790 BCL9LQ86UU0 1499 aa22.7■■□□□ 1.22
RAB43P1-201ENST00000561790 FMN2Q9NZ56 1722 aa22.69■■□□□ 1.22
RAB43P1-201ENST00000561790 KRT28Q7Z3Y7 464 aa22.69■■□□□ 1.22
RAB43P1-201ENST00000561790 C14orf93Q9H972 538 aaKnown RBP22.69■■□□□ 1.22
RAB43P1-201ENST00000561790 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
RAB43P1-201ENST00000561790 DHX57Q6P158 1386 aaKnown RBP22.68■■□□□ 1.22
RAB43P1-201ENST00000561790 SPATA31A3Q5VYP0 1347 aa22.68■■□□□ 1.22
RAB43P1-201ENST00000561790 GJD4Q96KN9 370 aaPredicted RBP22.68■■□□□ 1.22
RAB43P1-201ENST00000561790 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
RAB43P1-201ENST00000561790 KIF1AQ12756 1690 aa22.67■■□□□ 1.22
RAB43P1-201ENST00000561790 PSME1Q06323 249 aa22.66■■□□□ 1.22
RAB43P1-201ENST00000561790 CFAP70Q5T0N1 1121 aa22.66■■□□□ 1.22
RAB43P1-201ENST00000561790 PHF8Q9UPP1 1060 aa22.66■■□□□ 1.22
RAB43P1-201ENST00000561790 UNC5CLQ8IV45 518 aa22.65■■□□□ 1.22
RAB43P1-201ENST00000561790 SAFB2Q14151 953 aaKnown RBP eCLIP22.64■■□□□ 1.21
RAB43P1-201ENST00000561790 CCDC125Q86Z20 511 aa22.63■■□□□ 1.21
RAB43P1-201ENST00000561790 PRAM1Q96QH2 718 aa22.63■■□□□ 1.21
RAB43P1-201ENST00000561790 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
RAB43P1-201ENST00000561790 POGKQ9P215 609 aa22.62■■□□□ 1.21
RAB43P1-201ENST00000561790 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
RAB43P1-201ENST00000561790 LMOD2Q6P5Q4 547 aa22.61■■□□□ 1.21
RAB43P1-201ENST00000561790 TNS3Q68CZ2 1445 aa22.6■■□□□ 1.21
RAB43P1-201ENST00000561790 ZRANB1Q9UGI0 708 aa22.6■■□□□ 1.21
RAB43P1-201ENST00000561790 RGPD8O14715 1765 aaPredicted RBP22.59■■□□□ 1.21
RAB43P1-201ENST00000561790 SLIT2O94813 1529 aa22.59■■□□□ 1.21
RAB43P1-201ENST00000561790 EP400Q96L91 3159 aa22.59■■□□□ 1.21
RAB43P1-201ENST00000561790 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.59■■□□□ 1.21
RAB43P1-201ENST00000561790 CABLES1Q8TDN4 633 aa22.58■■□□□ 1.21
RAB43P1-201ENST00000561790 RALGAPBQ86X10 1494 aa22.58■■□□□ 1.2
RAB43P1-201ENST00000561790 USP32Q8NFA0 1604 aa22.57■■□□□ 1.2
RAB43P1-201ENST00000561790 SBNO1A3KN83 1393 aa22.56■■□□□ 1.2
RAB43P1-201ENST00000561790 ARHGEF10O15013 1369 aa22.55■■□□□ 1.2
RAB43P1-201ENST00000561790 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
RAB43P1-201ENST00000561790 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
RAB43P1-201ENST00000561790 CCDC9Q9Y3X0 531 aaKnown RBP22.55■■□□□ 1.2
RAB43P1-201ENST00000561790 SRCAPQ6ZRS2 3230 aa22.54■■□□□ 1.2
RAB43P1-201ENST00000561790 GLI3P10071 1580 aa22.54■■□□□ 1.2
RAB43P1-201ENST00000561790 DLC1Q96QB1 1528 aa22.53■■□□□ 1.2
RAB43P1-201ENST00000561790 TRAK1Q9UPV9 953 aa22.53■■□□□ 1.2
RAB43P1-201ENST00000561790 ANKARQ7Z5J8 1434 aa22.52■■□□□ 1.2
RAB43P1-201ENST00000561790 VPS72Q15906 364 aa22.52■■□□□ 1.2
RAB43P1-201ENST00000561790 KDM2AQ9Y2K7 1162 aa22.52■■□□□ 1.2
RAB43P1-201ENST00000561790 SEPT12Q8IYM1 358 aa22.51■■□□□ 1.19
RAB43P1-201ENST00000561790 HIRIP3Q9BW71 556 aaPredicted RBP22.51■■□□□ 1.19
RAB43P1-201ENST00000561790 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
RAB43P1-201ENST00000561790 SF3B2Q13435 895 aaKnown RBP22.49■■□□□ 1.19
RAB43P1-201ENST00000561790 DCAF11Q8TEB1 546 aa22.49■■□□□ 1.19
RAB43P1-201ENST00000561790 MINK1Q8N4C8 1332 aaPredicted RBP22.49■■□□□ 1.19
RAB43P1-201ENST00000561790 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
RAB43P1-201ENST00000561790 GPRASP1Q5JY77 1395 aa22.48■■□□□ 1.19
RAB43P1-201ENST00000561790 FAM83GA6ND36 823 aa22.47■■□□□ 1.19
RAB43P1-201ENST00000561790 ADGRB1O14514 1584 aa22.46■■□□□ 1.19
RAB43P1-201ENST00000561790 ADGRB2O60241 1585 aa22.46■■□□□ 1.19
RAB43P1-201ENST00000561790 PLCH1Q4KWH8 1693 aa22.46■■□□□ 1.19
RAB43P1-201ENST00000561790 NWD2Q9ULI1 1742 aa22.46■■□□□ 1.19
RAB43P1-201ENST00000561790 A0A0G2JS52 829 aa22.46■■□□□ 1.19
RAB43P1-201ENST00000561790 MYT1Q01538 1121 aa22.46■■□□□ 1.19
RAB43P1-201ENST00000561790 BRWD3Q6RI45 1802 aa22.45■■□□□ 1.19
RAB43P1-201ENST00000561790 ABCA3Q99758 1704 aa22.45■■□□□ 1.18
RAB43P1-201ENST00000561790 KRT27Q7Z3Y8 459 aa22.44■■□□□ 1.18
RAB43P1-201ENST00000561790 STAC3Q96MF2 364 aa22.44■■□□□ 1.18
RAB43P1-201ENST00000561790 WASLO00401 505 aaPredicted RBP22.43■■□□□ 1.18
RAB43P1-201ENST00000561790 ONECUT3O60422 494 aaPredicted RBP22.43■■□□□ 1.18
RAB43P1-201ENST00000561790 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
RAB43P1-201ENST00000561790 PRR36Q9H6K5 1346 aa22.42■■□□□ 1.18
RAB43P1-201ENST00000561790 DEFB132Q7Z7B7 95 aa22.42■■□□□ 1.18
RAB43P1-201ENST00000561790 BTG4Q9NY30 223 aa22.42■■□□□ 1.18
RAB43P1-201ENST00000561790 PAK3O75914 559 aaPredicted RBP22.41■■□□□ 1.18
RAB43P1-201ENST00000561790 TULP4Q9NRJ4 1543 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms