RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 FMN2Q9NZ56 1722 aa19.9■□□□□ 0.78
USB1-205ENST00000561743 C14orf93Q9H972 538 aaKnown RBP19.9■□□□□ 0.78
USB1-205ENST00000561743 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
USB1-205ENST00000561743 WAPLQ7Z5K2 1190 aa19.89■□□□□ 0.77
USB1-205ENST00000561743 ORAI2Q96SN7 254 aa19.89■□□□□ 0.77
USB1-205ENST00000561743 LRRC59Q96AG4 307 aaKnown RBP19.88■□□□□ 0.77
USB1-205ENST00000561743 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
USB1-205ENST00000561743 CFAP70Q5T0N1 1121 aa19.87■□□□□ 0.77
USB1-205ENST00000561743 RGPD8O14715 1765 aaPredicted RBP19.86■□□□□ 0.77
USB1-205ENST00000561743 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
USB1-205ENST00000561743 ADGRB1O14514 1584 aa19.86■□□□□ 0.77
USB1-205ENST00000561743 SOS2Q07890 1332 aaPredicted RBP19.85■□□□□ 0.77
USB1-205ENST00000561743 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
USB1-205ENST00000561743 NUTM2BA6NNL0 878 aaPredicted RBP19.84■□□□□ 0.77
USB1-205ENST00000561743 NUTM2EB1AL46 878 aaPredicted RBP19.84■□□□□ 0.77
USB1-205ENST00000561743 NUTM2AQ8IVF1 878 aaPredicted RBP19.84■□□□□ 0.77
USB1-205ENST00000561743 COL22A1Q8NFW1 1626 aaPredicted RBP19.84■□□□□ 0.77
USB1-205ENST00000561743 DLC1Q96QB1 1528 aa19.83■□□□□ 0.77
USB1-205ENST00000561743 SIRT1Q96EB6 747 aa19.83■□□□□ 0.77
USB1-205ENST00000561743 KIF1AQ12756 1690 aa19.82■□□□□ 0.76
USB1-205ENST00000561743 PXDNQ92626 1479 aa19.82■□□□□ 0.76
USB1-205ENST00000561743 ESCO1Q5FWF5 840 aa19.81■□□□□ 0.76
USB1-205ENST00000561743 NUTM2FA1L443 756 aa19.79■□□□□ 0.76
USB1-205ENST00000561743 ZNF772Q68DY9 489 aaPredicted RBP19.79■□□□□ 0.76
USB1-205ENST00000561743 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
USB1-205ENST00000561743 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
USB1-205ENST00000561743 NPHP3Q7Z494 1330 aa19.78■□□□□ 0.76
USB1-205ENST00000561743 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
USB1-205ENST00000561743 MARF1Q9Y4F3 1742 aaKnown RBP19.78■□□□□ 0.76
USB1-205ENST00000561743 PRAM1Q96QH2 718 aa19.77■□□□□ 0.76
USB1-205ENST00000561743 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
USB1-205ENST00000561743 ARHGEF28Q8N1W1 1705 aaKnown RBP19.76■□□□□ 0.75
USB1-205ENST00000561743 AFF2P51816 1311 aa19.76■□□□□ 0.75
USB1-205ENST00000561743 FOXO3O43524 673 aa19.75■□□□□ 0.75
USB1-205ENST00000561743 STAC3Q96MF2 364 aa19.75■□□□□ 0.75
USB1-205ENST00000561743 SAFB2Q14151 953 aaKnown RBP eCLIP19.74■□□□□ 0.75
USB1-205ENST00000561743 KIAA1210Q9ULL0 1709 aa19.73■□□□□ 0.75
USB1-205ENST00000561743 XPCQ01831 940 aaPredicted RBP19.73■□□□□ 0.75
USB1-205ENST00000561743 C8orf37Q96NL8 207 aa19.73■□□□□ 0.75
USB1-205ENST00000561743 ADAMTS2O95450 1211 aa19.71■□□□□ 0.75
USB1-205ENST00000561743 POGKQ9P215 609 aa19.71■□□□□ 0.75
USB1-205ENST00000561743 TRAK1Q9UPV9 953 aa19.71■□□□□ 0.75
USB1-205ENST00000561743 CDK12Q9NYV4 1490 aaPredicted RBP19.69■□□□□ 0.74
USB1-205ENST00000561743 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
USB1-205ENST00000561743 RXRBP28702 533 aa19.67■□□□□ 0.74
USB1-205ENST00000561743 PHF8Q9UPP1 1060 aa19.67■□□□□ 0.74
USB1-205ENST00000561743 ABCA3Q99758 1704 aa19.67■□□□□ 0.74
USB1-205ENST00000561743 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
USB1-205ENST00000561743 NGLY1Q96IV0 654 aa19.66■□□□□ 0.74
USB1-205ENST00000561743 SPATA31A3Q5VYP0 1347 aa19.66■□□□□ 0.74
USB1-205ENST00000561743 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
USB1-205ENST00000561743 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
USB1-205ENST00000561743 MINK1Q8N4C8 1332 aaPredicted RBP19.65■□□□□ 0.74
USB1-205ENST00000561743 ITSN1Q15811 1721 aa19.65■□□□□ 0.74
USB1-205ENST00000561743 KRT28Q7Z3Y7 464 aa19.64■□□□□ 0.73
USB1-205ENST00000561743 TNS3Q68CZ2 1445 aa19.64■□□□□ 0.73
USB1-205ENST00000561743 QTRT2Q9H974 415 aaKnown RBP19.63■□□□□ 0.73
USB1-205ENST00000561743 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
USB1-205ENST00000561743 RGS12O14924 1447 aa19.62■□□□□ 0.73
USB1-205ENST00000561743 FNBP4Q8N3X1 1017 aaPredicted RBP19.62■□□□□ 0.73
USB1-205ENST00000561743 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
USB1-205ENST00000561743 PRR36Q9H6K5 1346 aa19.61■□□□□ 0.73
USB1-205ENST00000561743 USP21Q9UK80 565 aa19.61■□□□□ 0.73
USB1-205ENST00000561743 ALS2Q96Q42 1657 aa19.61■□□□□ 0.73
USB1-205ENST00000561743 SBNO1A3KN83 1393 aa19.6■□□□□ 0.73
USB1-205ENST00000561743 WASLO00401 505 aaPredicted RBP19.6■□□□□ 0.73
USB1-205ENST00000561743 RBM6P78332 1123 aaKnown RBP19.6■□□□□ 0.73
USB1-205ENST00000561743 BCL9LQ86UU0 1499 aa19.6■□□□□ 0.73
USB1-205ENST00000561743 ATRNO75882 1429 aa19.59■□□□□ 0.73
USB1-205ENST00000561743 TOPAZ1Q8N9V7 1692 aa19.59■□□□□ 0.73
USB1-205ENST00000561743 PSME1Q06323 249 aa19.59■□□□□ 0.73
USB1-205ENST00000561743 PMFBP1Q8TBY8 1022 aa19.59■□□□□ 0.73
USB1-205ENST00000561743 ATP7BP35670 1465 aa19.58■□□□□ 0.72
USB1-205ENST00000561743 PLCH1Q4KWH8 1693 aa19.58■□□□□ 0.72
USB1-205ENST00000561743 NBPF1Q3BBV0 1214 aa19.57■□□□□ 0.72
USB1-205ENST00000561743 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
USB1-205ENST00000561743 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
USB1-205ENST00000561743 TRPC5Q9UL62 973 aaPredicted RBP19.56■□□□□ 0.72
USB1-205ENST00000561743 ARHGEF10O15013 1369 aa19.56■□□□□ 0.72
USB1-205ENST00000561743 SLIT2O94813 1529 aa19.56■□□□□ 0.72
USB1-205ENST00000561743 QRICH2Q9H0J4 1663 aa19.56■□□□□ 0.72
USB1-205ENST00000561743 NWD2Q9ULI1 1742 aa19.55■□□□□ 0.72
USB1-205ENST00000561743 UPF1Q92900 1129 aaKnown RBP eCLIP19.54■□□□□ 0.72
USB1-205ENST00000561743 SIN3AQ96ST3 1273 aa19.54■□□□□ 0.72
USB1-205ENST00000561743 CABLES1Q8TDN4 633 aa19.53■□□□□ 0.72
USB1-205ENST00000561743 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
USB1-205ENST00000561743 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
USB1-205ENST00000561743 GPRASP1Q5JY77 1395 aa19.52■□□□□ 0.72
USB1-205ENST00000561743 GLI3P10071 1580 aa19.51■□□□□ 0.71
USB1-205ENST00000561743 NUDT16Q96DE0 195 aaKnown RBP19.5■□□□□ 0.71
USB1-205ENST00000561743 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
USB1-205ENST00000561743 HAP1P54257 671 aaPredicted RBP19.49■□□□□ 0.71
USB1-205ENST00000561743 CDK19Q9BWU1 502 aa19.49■□□□□ 0.71
USB1-205ENST00000561743 NRAPQ86VF7 1730 aa19.48■□□□□ 0.71
USB1-205ENST00000561743 UNC5CLQ8IV45 518 aa19.48■□□□□ 0.71
USB1-205ENST00000561743 NGDNQ8NEJ9 315 aaKnown RBP19.48■□□□□ 0.71
USB1-205ENST00000561743 NEUROD1Q13562 356 aa19.47■□□□□ 0.71
USB1-205ENST00000561743 PHRF1Q9P1Y6 1649 aaKnown RBP19.47■□□□□ 0.71
USB1-205ENST00000561743 COL14A1Q05707 1796 aaKnown RBP19.47■□□□□ 0.71
USB1-205ENST00000561743 GJD4Q96KN9 370 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms