RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CDC42BPGQ6DT37 1551 aa30.13■■■□□ 2.41
TPM1-232ENST00000561425 ORAI2Q96SN7 254 aa30.11■■■□□ 2.41
TPM1-232ENST00000561425 NHSL1Q5SYE7 1610 aa30.11■■■□□ 2.41
TPM1-232ENST00000561425 RGS17Q9UGC6 210 aaPredicted RBP30.1■■■□□ 2.41
TPM1-232ENST00000561425 DLC1Q96QB1 1528 aa30.1■■■□□ 2.41
TPM1-232ENST00000561425 SPATA31A6Q5VVP1 1343 aa30.08■■■□□ 2.41
TPM1-232ENST00000561425 PHF23Q9BUL5 403 aaPredicted RBP30.07■■■□□ 2.4
TPM1-232ENST00000561425 DDX17Q92841 729 aaKnown RBP30.06■■■□□ 2.4
TPM1-232ENST00000561425 LRRC59Q96AG4 307 aaKnown RBP30.06■■■□□ 2.4
TPM1-232ENST00000561425 SOS2Q07890 1332 aaPredicted RBP30.04■■■□□ 2.4
TPM1-232ENST00000561425 TRIM26Q12899 539 aaPredicted RBP30.04■■■□□ 2.4
TPM1-232ENST00000561425 PRAM1Q96QH2 718 aa30.04■■■□□ 2.4
TPM1-232ENST00000561425 SHPRHQ149N8 1683 aa30.02■■■□□ 2.4
TPM1-232ENST00000561425 SOCS7O14512 581 aa29.99■■■□□ 2.39
TPM1-232ENST00000561425 ESCO1Q5FWF5 840 aa29.99■■■□□ 2.39
TPM1-232ENST00000561425 TRAK1Q9UPV9 953 aa29.99■■■□□ 2.39
TPM1-232ENST00000561425 LRP6O75581 1613 aa29.98■■■□□ 2.39
TPM1-232ENST00000561425 SIN3AQ96ST3 1273 aa29.96■■■□□ 2.39
TPM1-232ENST00000561425 POGKQ9P215 609 aa29.96■■■□□ 2.39
TPM1-232ENST00000561425 FMN2Q9NZ56 1722 aa29.96■■■□□ 2.39
TPM1-232ENST00000561425 PNPLA6Q8IY17 1366 aa29.95■■■□□ 2.39
TPM1-232ENST00000561425 L3MBTL2Q969R5 705 aa29.93■■■□□ 2.38
TPM1-232ENST00000561425 NPHP3Q7Z494 1330 aa29.93■■■□□ 2.38
TPM1-232ENST00000561425 NUTM2FA1L443 756 aa29.92■■■□□ 2.38
TPM1-232ENST00000561425 SAFB2Q14151 953 aaKnown RBP eCLIP29.92■■■□□ 2.38
TPM1-232ENST00000561425 KIAA1210Q9ULL0 1709 aa29.91■■■□□ 2.38
TPM1-232ENST00000561425 ADGRB2O60241 1585 aa29.9■■■□□ 2.38
TPM1-232ENST00000561425 FOXO3O43524 673 aa29.9■■■□□ 2.38
TPM1-232ENST00000561425 POTEAQ6S8J7 498 aa29.9■■■□□ 2.38
TPM1-232ENST00000561425 PXDNQ92626 1479 aa29.89■■■□□ 2.38
TPM1-232ENST00000561425 NBPF1Q3BBV0 1214 aa29.89■■■□□ 2.38
TPM1-232ENST00000561425 ANKARQ7Z5J8 1434 aa29.86■■■□□ 2.37
TPM1-232ENST00000561425 NUTM2BA6NNL0 878 aaPredicted RBP29.84■■■□□ 2.37
TPM1-232ENST00000561425 NUTM2EB1AL46 878 aaPredicted RBP29.84■■■□□ 2.37
TPM1-232ENST00000561425 NUTM2AQ8IVF1 878 aaPredicted RBP29.84■■■□□ 2.37
TPM1-232ENST00000561425 PHF8Q9UPP1 1060 aa29.84■■■□□ 2.37
TPM1-232ENST00000561425 WASLO00401 505 aaPredicted RBP29.83■■■□□ 2.37
TPM1-232ENST00000561425 MINK1Q8N4C8 1332 aaPredicted RBP29.82■■■□□ 2.36
TPM1-232ENST00000561425 NEUROD1Q13562 356 aa29.82■■■□□ 2.36
TPM1-232ENST00000561425 MEX3CQ5U5Q3 659 aaKnown RBP29.81■■■□□ 2.36
TPM1-232ENST00000561425 HIRIP3Q9BW71 556 aaPredicted RBP29.81■■■□□ 2.36
TPM1-232ENST00000561425 KIF1AQ12756 1690 aa29.81■■■□□ 2.36
TPM1-232ENST00000561425 ARHGEF28Q8N1W1 1705 aaKnown RBP29.8■■■□□ 2.36
TPM1-232ENST00000561425 USP32Q8NFA0 1604 aa29.79■■■□□ 2.36
TPM1-232ENST00000561425 XPCQ01831 940 aaPredicted RBP29.79■■■□□ 2.36
TPM1-232ENST00000561425 COL22A1Q8NFW1 1626 aaPredicted RBP29.78■■■□□ 2.36
TPM1-232ENST00000561425 PRR36Q9H6K5 1346 aa29.78■■■□□ 2.36
TPM1-232ENST00000561425 ZNF772Q68DY9 489 aaPredicted RBP29.78■■■□□ 2.36
TPM1-232ENST00000561425 EIF3AQ14152 1382 aaKnown RBP29.77■■■□□ 2.36
TPM1-232ENST00000561425 KRT28Q7Z3Y7 464 aa29.77■■■□□ 2.36
TPM1-232ENST00000561425 SPATA31A3Q5VYP0 1347 aa29.76■■■□□ 2.36
TPM1-232ENST00000561425 RGPD8O14715 1765 aaPredicted RBP29.76■■■□□ 2.35
TPM1-232ENST00000561425 TULP4Q9NRJ4 1543 aa29.75■■■□□ 2.35
TPM1-232ENST00000561425 PSME1Q06323 249 aa29.72■■■□□ 2.35
TPM1-232ENST00000561425 SBNO1A3KN83 1393 aa29.72■■■□□ 2.35
TPM1-232ENST00000561425 AFF2P51816 1311 aa29.71■■■□□ 2.35
TPM1-232ENST00000561425 PMFBP1Q8TBY8 1022 aa29.7■■■□□ 2.35
TPM1-232ENST00000561425 NBPF8Q3BBV2 869 aa29.69■■■□□ 2.34
TPM1-232ENST00000561425 CDK19Q9BWU1 502 aa29.69■■■□□ 2.34
TPM1-232ENST00000561425 C8orf37Q96NL8 207 aa29.68■■■□□ 2.34
TPM1-232ENST00000561425 ADAMTS2O95450 1211 aa29.67■■■□□ 2.34
TPM1-232ENST00000561425 NUDT16Q96DE0 195 aaKnown RBP29.67■■■□□ 2.34
TPM1-232ENST00000561425 TRPM1Q7Z4N2 1603 aa29.67■■■□□ 2.34
TPM1-232ENST00000561425 FNBP4Q8N3X1 1017 aaPredicted RBP29.66■■■□□ 2.34
TPM1-232ENST00000561425 ATP7BP35670 1465 aa29.66■■■□□ 2.34
TPM1-232ENST00000561425 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
TPM1-232ENST00000561425 TNS3Q68CZ2 1445 aa29.65■■■□□ 2.34
TPM1-232ENST00000561425 GPRASP1Q5JY77 1395 aa29.64■■■□□ 2.33
TPM1-232ENST00000561425 NGLY1Q96IV0 654 aa29.63■■■□□ 2.33
TPM1-232ENST00000561425 CCDC61Q9Y6R9 512 aa29.61■■■□□ 2.33
TPM1-232ENST00000561425 ROCK2O75116 1388 aaKnown RBP29.6■■■□□ 2.33
TPM1-232ENST00000561425 PLEKHG3A1L390 1219 aa29.59■■■□□ 2.33
TPM1-232ENST00000561425 ARHGEF10O15013 1369 aa29.59■■■□□ 2.33
TPM1-232ENST00000561425 RXRBP28702 533 aa29.58■■■□□ 2.33
TPM1-232ENST00000561425 TONSLQ96HA7 1378 aa29.58■■■□□ 2.33
TPM1-232ENST00000561425 QTRT2Q9H974 415 aaKnown RBP29.58■■■□□ 2.33
TPM1-232ENST00000561425 POLR3AO14802 1390 aaPredicted RBP29.57■■■□□ 2.32
TPM1-232ENST00000561425 NGDNQ8NEJ9 315 aaKnown RBP29.57■■■□□ 2.32
TPM1-232ENST00000561425 TRPM3Q9HCF6 1732 aaPredicted RBP29.57■■■□□ 2.32
TPM1-232ENST00000561425 CDK12Q9NYV4 1490 aaPredicted RBP29.55■■■□□ 2.32
TPM1-232ENST00000561425 USP21Q9UK80 565 aa29.54■■■□□ 2.32
TPM1-232ENST00000561425 BCL9LQ86UU0 1499 aa29.53■■■□□ 2.32
TPM1-232ENST00000561425 ITSN1Q15811 1721 aa29.52■■■□□ 2.32
TPM1-232ENST00000561425 RBM6P78332 1123 aaKnown RBP29.52■■■□□ 2.32
TPM1-232ENST00000561425 TOPAZ1Q8N9V7 1692 aa29.52■■■□□ 2.32
TPM1-232ENST00000561425 CABLES1Q8TDN4 633 aa29.51■■■□□ 2.31
TPM1-232ENST00000561425 ACEP12821 1306 aa29.5■■■□□ 2.31
TPM1-232ENST00000561425 CABP2Q9NPB3 220 aa29.5■■■□□ 2.31
TPM1-232ENST00000561425 MARF1Q9Y4F3 1742 aaKnown RBP29.5■■■□□ 2.31
TPM1-232ENST00000561425 ALS2Q96Q42 1657 aa29.5■■■□□ 2.31
TPM1-232ENST00000561425 QRICH2Q9H0J4 1663 aa29.5■■■□□ 2.31
TPM1-232ENST00000561425 RALGAPBQ86X10 1494 aa29.49■■■□□ 2.31
TPM1-232ENST00000561425 SRPK2P78362 688 aaKnown RBP29.49■■■□□ 2.31
TPM1-232ENST00000561425 TRPC5Q9UL62 973 aaPredicted RBP29.49■■■□□ 2.31
TPM1-232ENST00000561425 ATRNO75882 1429 aa29.48■■■□□ 2.31
TPM1-232ENST00000561425 LMOD2Q6P5Q4 547 aa29.48■■■□□ 2.31
TPM1-232ENST00000561425 SLIT2O94813 1529 aa29.48■■■□□ 2.31
TPM1-232ENST00000561425 EVC2Q86UK5 1308 aa29.46■■■□□ 2.31
TPM1-232ENST00000561425 SBNO2Q9Y2G9 1366 aa29.45■■■□□ 2.31
TPM1-232ENST00000561425 CARD11Q9BXL7 1154 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms