RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 DISP3Q9P2K9 1392 aa14.52□□□□□ -0.08
HERC1-212ENST00000561348 NBPF1Q3BBV0 1214 aa14.52□□□□□ -0.09
HERC1-212ENST00000561348 BRINP3Q76B58 766 aa14.52□□□□□ -0.09
HERC1-212ENST00000561348 DDX17Q92841 729 aaKnown RBP14.52□□□□□ -0.09
HERC1-212ENST00000561348 MINK1Q8N4C8 1332 aaPredicted RBP14.51□□□□□ -0.09
HERC1-212ENST00000561348 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
HERC1-212ENST00000561348 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
HERC1-212ENST00000561348 ORAI2Q96SN7 254 aa14.5□□□□□ -0.09
HERC1-212ENST00000561348 MST1RQ04912 1400 aa14.49□□□□□ -0.09
HERC1-212ENST00000561348 PHLPP1O60346 1717 aa14.49□□□□□ -0.09
HERC1-212ENST00000561348 DCCP43146 1447 aa14.49□□□□□ -0.09
HERC1-212ENST00000561348 PRAG1Q86YV5 1406 aa14.48□□□□□ -0.09
HERC1-212ENST00000561348 KNDC1Q76NI1 1749 aa14.47□□□□□ -0.09
HERC1-212ENST00000561348 TECPR2O15040 1411 aa14.47□□□□□ -0.09
HERC1-212ENST00000561348 C1orf167Q5SNV9 1468 aa14.46□□□□□ -0.09
HERC1-212ENST00000561348 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
HERC1-212ENST00000561348 XPCQ01831 940 aaPredicted RBP14.46□□□□□ -0.09
HERC1-212ENST00000561348 ADGRB1O14514 1584 aa14.46□□□□□ -0.09
HERC1-212ENST00000561348 NUTM2BA6NNL0 878 aaPredicted RBP14.45□□□□□ -0.1
HERC1-212ENST00000561348 NUTM2EB1AL46 878 aaPredicted RBP14.45□□□□□ -0.1
HERC1-212ENST00000561348 NUTM2AQ8IVF1 878 aaPredicted RBP14.45□□□□□ -0.1
HERC1-212ENST00000561348 SIRT1Q96EB6 747 aa14.45□□□□□ -0.1
HERC1-212ENST00000561348 FOXO3O43524 673 aa14.44□□□□□ -0.1
HERC1-212ENST00000561348 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
HERC1-212ENST00000561348 NBPF8Q3BBV2 869 aa14.43□□□□□ -0.1
HERC1-212ENST00000561348 MEX3CQ5U5Q3 659 aaKnown RBP14.43□□□□□ -0.1
HERC1-212ENST00000561348 PMFBP1Q8TBY8 1022 aa14.42□□□□□ -0.1
HERC1-212ENST00000561348 CDC42BPGQ6DT37 1551 aa14.42□□□□□ -0.1
HERC1-212ENST00000561348 DLC1Q96QB1 1528 aa14.41□□□□□ -0.1
HERC1-212ENST00000561348 LMOD2Q6P5Q4 547 aa14.41□□□□□ -0.1
HERC1-212ENST00000561348 JCADQ9P266 1359 aa14.41□□□□□ -0.1
HERC1-212ENST00000561348 LRRC59Q96AG4 307 aaKnown RBP14.4□□□□□ -0.1
HERC1-212ENST00000561348 CARD11Q9BXL7 1154 aa14.4□□□□□ -0.1
HERC1-212ENST00000561348 KIAA1210Q9ULL0 1709 aa14.4□□□□□ -0.1
HERC1-212ENST00000561348 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
HERC1-212ENST00000561348 ARHGEF28Q8N1W1 1705 aaKnown RBP14.39□□□□□ -0.11
HERC1-212ENST00000561348 WASLO00401 505 aaPredicted RBP14.39□□□□□ -0.11
HERC1-212ENST00000561348 SRPK2P78362 688 aaKnown RBP14.39□□□□□ -0.11
HERC1-212ENST00000561348 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
HERC1-212ENST00000561348 RGPD8O14715 1765 aaPredicted RBP14.39□□□□□ -0.11
HERC1-212ENST00000561348 CENPJQ9HC77 1338 aaPredicted RBP14.39□□□□□ -0.11
HERC1-212ENST00000561348 FMN2Q9NZ56 1722 aa14.38□□□□□ -0.11
HERC1-212ENST00000561348 COL16A1Q07092 1604 aaPredicted RBP14.38□□□□□ -0.11
HERC1-212ENST00000561348 AHDC1Q5TGY3 1603 aaPredicted RBP14.38□□□□□ -0.11
HERC1-212ENST00000561348 PSME1Q06323 249 aa14.38□□□□□ -0.11
HERC1-212ENST00000561348 CDK19Q9BWU1 502 aa14.38□□□□□ -0.11
HERC1-212ENST00000561348 NPHP3Q7Z494 1330 aa14.38□□□□□ -0.11
HERC1-212ENST00000561348 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
HERC1-212ENST00000561348 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
HERC1-212ENST00000561348 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
HERC1-212ENST00000561348 NHSL1Q5SYE7 1610 aa14.36□□□□□ -0.11
HERC1-212ENST00000561348 ADAMTS2O95450 1211 aa14.35□□□□□ -0.11
HERC1-212ENST00000561348 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
HERC1-212ENST00000561348 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
HERC1-212ENST00000561348 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
HERC1-212ENST00000561348 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
HERC1-212ENST00000561348 PRR36Q9H6K5 1346 aa14.34□□□□□ -0.11
HERC1-212ENST00000561348 EIF3AQ14152 1382 aaKnown RBP14.34□□□□□ -0.11
HERC1-212ENST00000561348 SOS2Q07890 1332 aaPredicted RBP14.33□□□□□ -0.12
HERC1-212ENST00000561348 SPATA31A6Q5VVP1 1343 aa14.33□□□□□ -0.12
HERC1-212ENST00000561348 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
HERC1-212ENST00000561348 C8orf37Q96NL8 207 aa14.32□□□□□ -0.12
HERC1-212ENST00000561348 QRICH2Q9H0J4 1663 aa14.32□□□□□ -0.12
HERC1-212ENST00000561348 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
HERC1-212ENST00000561348 GPRASP1Q5JY77 1395 aa14.31□□□□□ -0.12
HERC1-212ENST00000561348 PNPLA6Q8IY17 1366 aa14.31□□□□□ -0.12
HERC1-212ENST00000561348 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
HERC1-212ENST00000561348 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
HERC1-212ENST00000561348 ADGRB2O60241 1585 aa14.3□□□□□ -0.12
HERC1-212ENST00000561348 EVC2Q86UK5 1308 aa14.3□□□□□ -0.12
HERC1-212ENST00000561348 CLSPNQ9HAW4 1339 aa14.3□□□□□ -0.12
HERC1-212ENST00000561348 USP32Q8NFA0 1604 aa14.3□□□□□ -0.12
HERC1-212ENST00000561348 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
HERC1-212ENST00000561348 SHPRHQ149N8 1683 aa14.3□□□□□ -0.12
HERC1-212ENST00000561348 LRP6O75581 1613 aa14.28□□□□□ -0.12
HERC1-212ENST00000561348 RALGAPBQ86X10 1494 aa14.28□□□□□ -0.12
HERC1-212ENST00000561348 CABLES1Q8TDN4 633 aa14.28□□□□□ -0.12
HERC1-212ENST00000561348 PXDNQ92626 1479 aa14.28□□□□□ -0.12
HERC1-212ENST00000561348 NGLY1Q96IV0 654 aa14.28□□□□□ -0.12
HERC1-212ENST00000561348 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
HERC1-212ENST00000561348 NUTM2GQ5VZR2 741 aa14.27□□□□□ -0.13
HERC1-212ENST00000561348 ACEP12821 1306 aa14.26□□□□□ -0.13
HERC1-212ENST00000561348 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
HERC1-212ENST00000561348 TMC1Q8TDI8 760 aa14.26□□□□□ -0.13
HERC1-212ENST00000561348 CABP1Q9NZU7 370 aa14.26□□□□□ -0.13
HERC1-212ENST00000561348 ATP7BP35670 1465 aa14.25□□□□□ -0.13
HERC1-212ENST00000561348 PPIP5K1Q6PFW1 1433 aa14.25□□□□□ -0.13
HERC1-212ENST00000561348 ITSN1Q15811 1721 aa14.25□□□□□ -0.13
HERC1-212ENST00000561348 ST20-MTHFSA0A0A6YYL1 179 aa14.25□□□□□ -0.13
HERC1-212ENST00000561348 RGS17Q9UGC6 210 aaPredicted RBP14.25□□□□□ -0.13
HERC1-212ENST00000561348 AFF2P51816 1311 aa14.24□□□□□ -0.13
HERC1-212ENST00000561348 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
HERC1-212ENST00000561348 TNS3Q68CZ2 1445 aa14.24□□□□□ -0.13
HERC1-212ENST00000561348 POTEAQ6S8J7 498 aa14.23□□□□□ -0.13
HERC1-212ENST00000561348 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
HERC1-212ENST00000561348 ZNF772Q68DY9 489 aaPredicted RBP14.22□□□□□ -0.13
HERC1-212ENST00000561348 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
HERC1-212ENST00000561348 ABTB2Q8N961 1025 aa14.21□□□□□ -0.13
HERC1-212ENST00000561348 SBNO1A3KN83 1393 aa14.21□□□□□ -0.14
HERC1-212ENST00000561348 ARHGEF10O15013 1369 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms