RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, human

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-222	ENST00000561208	CT47B1	P0C2W7	299 aa	Predicted RBP	12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	MCM2	P49736	904 aa		12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	TSR2	Q969E8	191 aa	Known RBP	12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	NOB1	Q9ULX3	412 aa	Known RBP	12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	ATF7IP	Q6VMQ6	1270 aa		12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	DAPK1	P53355	1430 aa		12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	COG3	Q96JB2	828 aa		12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	LETM1	O95202	739 aa	Predicted RBP	12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	SASS6	Q6UVJ0	657 aa		12.88	□□□□□ -0.35
MEIS2-222	ENST00000561208	TEX35	Q5T0J7	233 aa		12.87	□□□□□ -0.35
MEIS2-222	ENST00000561208	GGNBP2	Q9H3C7	697 aa		12.87	□□□□□ -0.35
MEIS2-222	ENST00000561208		A0A0U1RQG5	324 aa	Predicted RBP	12.87	□□□□□ -0.35
MEIS2-222	ENST00000561208	MLEC	Q14165	292 aa		12.87	□□□□□ -0.35
MEIS2-222	ENST00000561208	PLEKHH2	Q8IVE3	1493 aa		12.87	□□□□□ -0.35
MEIS2-222	ENST00000561208	PTPRG	P23470	1445 aa		12.87	□□□□□ -0.35
MEIS2-222	ENST00000561208	CCAR2	Q8N163	923 aa	Known RBP	12.87	□□□□□ -0.35
MEIS2-222	ENST00000561208	CHD1L	Q86WJ1	897 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	WWC1	Q8IX03	1113 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	SCAPER	Q9BY12	1400 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	AMPH	P49418	695 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	GPS2	Q13227	327 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	CFAP70	Q5T0N1	1121 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	C1orf115	Q9H7X2	142 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	DUSP27	Q5VZP5	1158 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	HOMER1	Q86YM7	354 aa		12.86	□□□□□ -0.35
MEIS2-222	ENST00000561208	CHMP4C	Q96CF2	233 aa		12.85	□□□□□ -0.35
MEIS2-222	ENST00000561208	PDCL3	Q9H2J4	239 aa		12.85	□□□□□ -0.35
MEIS2-222	ENST00000561208	HMOX1	P09601	288 aa		12.85	□□□□□ -0.35
MEIS2-222	ENST00000561208	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.84	□□□□□ -0.35
MEIS2-222	ENST00000561208	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.84	□□□□□ -0.35
MEIS2-222	ENST00000561208	GORAB	Q5T7V8	394 aa		12.84	□□□□□ -0.35
MEIS2-222	ENST00000561208	PCF11	O94913	1555 aa	Known RBP	12.83	□□□□□ -0.35
MEIS2-222	ENST00000561208	LRPPRC	P42704	1394 aa	Known RBP	12.83	□□□□□ -0.35
MEIS2-222	ENST00000561208	CLCN1	P35523	988 aa		12.83	□□□□□ -0.35
MEIS2-222	ENST00000561208	FKBP5	Q13451	457 aa	Predicted RBP	12.83	□□□□□ -0.35
MEIS2-222	ENST00000561208	MPND	Q8N594	471 aa		12.83	□□□□□ -0.36
MEIS2-222	ENST00000561208	RNF20	Q5VTR2	975 aa		12.83	□□□□□ -0.36
MEIS2-222	ENST00000561208	TRIM5	Q9C035	493 aa		12.83	□□□□□ -0.36
MEIS2-222	ENST00000561208	ARGLU1	Q9NWB6	273 aa	Predicted RBP	12.83	□□□□□ -0.36
MEIS2-222	ENST00000561208	RPRD2	Q5VT52	1461 aa	Known RBP	12.83	□□□□□ -0.36
MEIS2-222	ENST00000561208	C9orf84	Q5VXU9	1444 aa		12.82	□□□□□ -0.36
MEIS2-222	ENST00000561208	CCDC66	A2RUB6	948 aa		12.82	□□□□□ -0.36
MEIS2-222	ENST00000561208	RARS	P54136	660 aa	Known RBP	12.82	□□□□□ -0.36
MEIS2-222	ENST00000561208	TPD52L1	Q16890	204 aa	Predicted RBP	12.82	□□□□□ -0.36
MEIS2-222	ENST00000561208	NKTR	P30414	1462 aa	Known RBP	12.82	□□□□□ -0.36
MEIS2-222	ENST00000561208	AQR	O60306	1485 aa	Known RBP eCLIP	12.82	□□□□□ -0.36	2e-7	■■■■□ 21.8
MEIS2-222	ENST00000561208	XRCC6	P12956	609 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	TNPO1	Q92973	898 aa	Known RBP	12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	TBC1D32	Q96NH3	1257 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	SLC12A5	Q9H2X9	1139 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	IFIT2	P09913	472 aa	Known RBP	12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	CCDC27	Q2M243	656 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	ZMYND15	Q9H091	742 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	ERC2	O15083	957 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	FIBP	O43427	364 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	CCDC73	Q6ZRK6	1079 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	CABP2	Q9NPB3	220 aa		12.81	□□□□□ -0.36
MEIS2-222	ENST00000561208	MNS1	Q8NEH6	495 aa		12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	TMEM132E	Q6IEE7	984 aa		12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	LTV1	Q96GA3	475 aa	Predicted RBP	12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	IGHD	P01880	384 aa		12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	TWISTNB	Q3B726	338 aa	Predicted RBP	12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	C8orf34	Q49A92	452 aa		12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	NGDN	Q8NEJ9	315 aa	Known RBP	12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	PRDM2	Q13029	1718 aa		12.8	□□□□□ -0.36
MEIS2-222	ENST00000561208	TULP1	O00294	542 aa	Predicted RBP	12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	PRKAR2B	P31323	418 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	SPC24	Q8NBT2	197 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	WDR33	Q9C0J8	1336 aa	Known RBP	12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	PTPN23	Q9H3S7	1636 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	CREBRF	Q8IUR6	639 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	NECTIN2	Q92692	538 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	NUTM2F	A1L443	756 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	HSP90AB4P	Q58FF6	505 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	PODXL2	Q9NZ53	605 aa		12.79	□□□□□ -0.36
MEIS2-222	ENST00000561208	SYCE3	A1L190	88 aa		12.78	□□□□□ -0.36
MEIS2-222	ENST00000561208	TMEM57	Q8N5G2	664 aa		12.78	□□□□□ -0.36
MEIS2-222	ENST00000561208	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.78	□□□□□ -0.36
MEIS2-222	ENST00000561208	TRO	Q12816	1431 aa	Predicted RBP	12.78	□□□□□ -0.36
MEIS2-222	ENST00000561208	XPC	Q01831	940 aa	Predicted RBP	12.77	□□□□□ -0.36
MEIS2-222	ENST00000561208	TSPYL4	Q9UJ04	414 aa		12.77	□□□□□ -0.36
MEIS2-222	ENST00000561208	PRG4	Q92954	1404 aa	Predicted RBP	12.77	□□□□□ -0.36
MEIS2-222	ENST00000561208	SSFA2	P28290	1259 aa		12.77	□□□□□ -0.36
MEIS2-222	ENST00000561208	CCDC192	P0DO97	292 aa		12.77	□□□□□ -0.37
MEIS2-222	ENST00000561208	EIF2S2	P20042	333 aa	Known RBP	12.77	□□□□□ -0.37
MEIS2-222	ENST00000561208	NOC3L	Q8WTT2	800 aa	Known RBP	12.77	□□□□□ -0.37
MEIS2-222	ENST00000561208	PANK2	Q9BZ23	570 aa		12.77	□□□□□ -0.37
MEIS2-222	ENST00000561208	GNAI3	P08754	354 aa		12.76	□□□□□ -0.37
MEIS2-222	ENST00000561208	FBXW7	Q969H0	707 aa		12.76	□□□□□ -0.37
MEIS2-222	ENST00000561208	TPM1	P09493	284 aa		12.76	□□□□□ -0.37
MEIS2-222	ENST00000561208	PDC	P20941	246 aa		12.76	□□□□□ -0.37
MEIS2-222	ENST00000561208	HECW1	Q76N89	1606 aa		12.76	□□□□□ -0.37
MEIS2-222	ENST00000561208	CCDC112	Q8NEF3	446 aa		12.76	□□□□□ -0.37
MEIS2-222	ENST00000561208	ZNF428	Q96B54	188 aa		12.75	□□□□□ -0.37
MEIS2-222	ENST00000561208	NAT10	Q9H0A0	1025 aa	Known RBP	12.75	□□□□□ -0.37
MEIS2-222	ENST00000561208	UBTFL1	P0CB47	393 aa	Predicted RBP	12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms