RNA–Protein interactions for RNA: ENST00000560993.1

SEMA4B-217, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-217ENST00000560993 PRAG1Q86YV5 1406 aa22.44■■□□□ 1.18
SEMA4B-217ENST00000560993 COL22A1Q8NFW1 1626 aaPredicted RBP22.43■■□□□ 1.18
SEMA4B-217ENST00000560993 TRPC5Q9UL62 973 aaPredicted RBP22.43■■□□□ 1.18
SEMA4B-217ENST00000560993 MYOM2P54296 1465 aa22.42■■□□□ 1.18
SEMA4B-217ENST00000560993 BCL9LQ86UU0 1499 aa22.42■■□□□ 1.18
SEMA4B-217ENST00000560993 KIF1BO60333 1816 aa22.4■■□□□ 1.18
SEMA4B-217ENST00000560993 HRCP23327 699 aa22.38■■□□□ 1.17
SEMA4B-217ENST00000560993 PXDNQ92626 1479 aa22.38■■□□□ 1.17
SEMA4B-217ENST00000560993 VGFO15240 615 aaPredicted RBP22.35■■□□□ 1.17
SEMA4B-217ENST00000560993 XPCQ01831 940 aaPredicted RBP22.33■■□□□ 1.17
SEMA4B-217ENST00000560993 MARF1Q9Y4F3 1742 aaKnown RBP22.33■■□□□ 1.17
SEMA4B-217ENST00000560993 FOXO3O43524 673 aa22.32■■□□□ 1.16
SEMA4B-217ENST00000560993 ZRANB1Q9UGI0 708 aa22.32■■□□□ 1.16
SEMA4B-217ENST00000560993 PPLO60437 1756 aa22.31■■□□□ 1.16
SEMA4B-217ENST00000560993 ESCO1Q5FWF5 840 aa22.31■■□□□ 1.16
SEMA4B-217ENST00000560993 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
SEMA4B-217ENST00000560993 CDC42BPGQ6DT37 1551 aa22.3■■□□□ 1.16
SEMA4B-217ENST00000560993 RPGRIP1LQ68CZ1 1315 aa22.3■■□□□ 1.16
SEMA4B-217ENST00000560993 NPHP3Q7Z494 1330 aa22.3■■□□□ 1.16
SEMA4B-217ENST00000560993 ACIN1Q9UKV3 1341 aaKnown RBP22.29■■□□□ 1.16
SEMA4B-217ENST00000560993 CCDC125Q86Z20 511 aa22.28■■□□□ 1.16
SEMA4B-217ENST00000560993 GLI3P10071 1580 aa22.28■■□□□ 1.16
SEMA4B-217ENST00000560993 WAPLQ7Z5K2 1190 aa22.26■■□□□ 1.15
SEMA4B-217ENST00000560993 SLIT2O94813 1529 aa22.26■■□□□ 1.15
SEMA4B-217ENST00000560993 NUTM2FA1L443 756 aa22.25■■□□□ 1.15
SEMA4B-217ENST00000560993 RALGAPBQ86X10 1494 aa22.25■■□□□ 1.15
SEMA4B-217ENST00000560993 ADGRF5Q8IZF2 1346 aa22.25■■□□□ 1.15
SEMA4B-217ENST00000560993 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
SEMA4B-217ENST00000560993 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.24■■□□□ 1.15
SEMA4B-217ENST00000560993 DHX57Q6P158 1386 aaKnown RBP22.24■■□□□ 1.15
SEMA4B-217ENST00000560993 BRWD3Q6RI45 1802 aa22.23■■□□□ 1.15
SEMA4B-217ENST00000560993 TECPR2O15040 1411 aa22.23■■□□□ 1.15
SEMA4B-217ENST00000560993 UNC5CLQ8IV45 518 aa22.22■■□□□ 1.15
SEMA4B-217ENST00000560993 DEFB132Q7Z7B7 95 aa22.21■■□□□ 1.15
SEMA4B-217ENST00000560993 SPATA31A3Q5VYP0 1347 aa22.21■■□□□ 1.15
SEMA4B-217ENST00000560993 FOXD1Q16676 465 aa22.2■■□□□ 1.14
SEMA4B-217ENST00000560993 STK26Q9P289 416 aa22.2■■□□□ 1.14
SEMA4B-217ENST00000560993 BLMP54132 1417 aaPredicted RBP22.19■■□□□ 1.14
SEMA4B-217ENST00000560993 LRPPRCP42704 1394 aaKnown RBP22.18■■□□□ 1.14
SEMA4B-217ENST00000560993 TMEM132EQ6IEE7 984 aa22.18■■□□□ 1.14
SEMA4B-217ENST00000560993 CCER1Q8TC90 406 aaPredicted RBP22.18■■□□□ 1.14
SEMA4B-217ENST00000560993 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
SEMA4B-217ENST00000560993 ABCC11Q96J66 1382 aa22.17■■□□□ 1.14
SEMA4B-217ENST00000560993 FMN2Q9NZ56 1722 aa22.17■■□□□ 1.14
SEMA4B-217ENST00000560993 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
SEMA4B-217ENST00000560993 USP32Q8NFA0 1604 aa22.15■■□□□ 1.14
SEMA4B-217ENST00000560993 ONECUT3O60422 494 aaPredicted RBP22.14■■□□□ 1.13
SEMA4B-217ENST00000560993 SEPT12Q8IYM1 358 aa22.14■■□□□ 1.13
SEMA4B-217ENST00000560993 CABLES1Q8TDN4 633 aa22.14■■□□□ 1.13
SEMA4B-217ENST00000560993 KRT28Q7Z3Y7 464 aa22.13■■□□□ 1.13
SEMA4B-217ENST00000560993 IFT172Q9UG01 1749 aa22.13■■□□□ 1.13
SEMA4B-217ENST00000560993 RGPD8O14715 1765 aaPredicted RBP22.12■■□□□ 1.13
SEMA4B-217ENST00000560993 KNDC1Q76NI1 1749 aa22.12■■□□□ 1.13
SEMA4B-217ENST00000560993 RGL3Q3MIN7 710 aa22.12■■□□□ 1.13
SEMA4B-217ENST00000560993 VPS72Q15906 364 aa22.11■■□□□ 1.13
SEMA4B-217ENST00000560993 CCDC144AA2RUR9 1427 aa22.1■■□□□ 1.13
SEMA4B-217ENST00000560993 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
SEMA4B-217ENST00000560993 PIK3C2GO75747 1445 aa22.09■■□□□ 1.13
SEMA4B-217ENST00000560993 KIF1AQ12756 1690 aa22.09■■□□□ 1.13
SEMA4B-217ENST00000560993 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.13
SEMA4B-217ENST00000560993 YTHDC2Q9H6S0 1430 aaKnown RBP22.08■■□□□ 1.13
SEMA4B-217ENST00000560993 TNS3Q68CZ2 1445 aa22.07■■□□□ 1.12
SEMA4B-217ENST00000560993 PLCH1Q4KWH8 1693 aa22.07■■□□□ 1.12
SEMA4B-217ENST00000560993 ABCA3Q99758 1704 aa22.06■■□□□ 1.12
SEMA4B-217ENST00000560993 FAM83GA6ND36 823 aa22.06■■□□□ 1.12
SEMA4B-217ENST00000560993 ANKRD30BQ9BXX2 1392 aa22.06■■□□□ 1.12
SEMA4B-217ENST00000560993 LRP5O75197 1615 aa22.06■■□□□ 1.12
SEMA4B-217ENST00000560993 SIRT1Q96EB6 747 aa22.05■■□□□ 1.12
SEMA4B-217ENST00000560993 PHF8Q9UPP1 1060 aa22.05■■□□□ 1.12
SEMA4B-217ENST00000560993 NWD2Q9ULI1 1742 aa22.05■■□□□ 1.12
SEMA4B-217ENST00000560993 PLEKHG5O94827 1062 aa22.04■■□□□ 1.12
SEMA4B-217ENST00000560993 KRT27Q7Z3Y8 459 aa22.04■■□□□ 1.12
SEMA4B-217ENST00000560993 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
SEMA4B-217ENST00000560993 SBNO1A3KN83 1393 aa22.02■■□□□ 1.12
SEMA4B-217ENST00000560993 PSDA5PKW4 1024 aaPredicted RBP22.01■■□□□ 1.11
SEMA4B-217ENST00000560993 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
SEMA4B-217ENST00000560993 NRAPQ86VF7 1730 aa21.99■■□□□ 1.11
SEMA4B-217ENST00000560993 PSME1Q06323 249 aa21.98■■□□□ 1.11
SEMA4B-217ENST00000560993 SF3B2Q13435 895 aaKnown RBP21.98■■□□□ 1.11
SEMA4B-217ENST00000560993 CFAP70Q5T0N1 1121 aa21.98■■□□□ 1.11
SEMA4B-217ENST00000560993 CCDC9Q9Y3X0 531 aaKnown RBP21.97■■□□□ 1.11
SEMA4B-217ENST00000560993 HAP1P54257 671 aaPredicted RBP21.96■■□□□ 1.11
SEMA4B-217ENST00000560993 FAM98CQ17RN3 349 aaKnown RBP21.96■■□□□ 1.11
SEMA4B-217ENST00000560993 PMFBP1Q8TBY8 1022 aa21.96■■□□□ 1.11
SEMA4B-217ENST00000560993 TRPM3Q9HCF6 1732 aaPredicted RBP21.95■■□□□ 1.1
SEMA4B-217ENST00000560993 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.1
SEMA4B-217ENST00000560993 FAM182BQ5T319 152 aa21.95■■□□□ 1.1
SEMA4B-217ENST00000560993 LMOD2Q6P5Q4 547 aa21.95■■□□□ 1.1
SEMA4B-217ENST00000560993 PRAM1Q96QH2 718 aa21.95■■□□□ 1.1
SEMA4B-217ENST00000560993 ARHGEF10O15013 1369 aa21.95■■□□□ 1.1
SEMA4B-217ENST00000560993 EN1Q05925 392 aaPredicted RBP21.93■■□□□ 1.1
SEMA4B-217ENST00000560993 BTG4Q9NY30 223 aa21.93■■□□□ 1.1
SEMA4B-217ENST00000560993 ALS2Q96Q42 1657 aa21.91■■□□□ 1.1
SEMA4B-217ENST00000560993 BAG6P46379 1132 aa21.91■■□□□ 1.1
SEMA4B-217ENST00000560993 PRR36Q9H6K5 1346 aa21.9■■□□□ 1.1
SEMA4B-217ENST00000560993 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
SEMA4B-217ENST00000560993 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.1
SEMA4B-217ENST00000560993 SPATA31A5Q5VU36 1347 aa21.88■■□□□ 1.09
SEMA4B-217ENST00000560993 SPATA31A7Q8IWB4 1347 aa21.88■■□□□ 1.09
SEMA4B-217ENST00000560993 DLC1Q96QB1 1528 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms