RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 MYOM2P54296 1465 aa28.73■■■□□ 2.19
CRNDE-210ENST00000560912 PXDNQ92626 1479 aa28.73■■■□□ 2.19
CRNDE-210ENST00000560912 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
CRNDE-210ENST00000560912 SLC4A1APQ9BWU0 796 aaKnown RBP28.73■■■□□ 2.19
CRNDE-210ENST00000560912 TECPR2O15040 1411 aa28.71■■■□□ 2.19
CRNDE-210ENST00000560912 FMN2Q9NZ56 1722 aa28.69■■■□□ 2.18
CRNDE-210ENST00000560912 ATRNO75882 1429 aa28.69■■■□□ 2.18
CRNDE-210ENST00000560912 SPATA31E1Q6ZUB1 1445 aa28.68■■■□□ 2.18
CRNDE-210ENST00000560912 FNBP4Q8N3X1 1017 aaPredicted RBP28.67■■■□□ 2.18
CRNDE-210ENST00000560912 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.66■■■□□ 2.18
CRNDE-210ENST00000560912 USP21Q9UK80 565 aa28.66■■■□□ 2.18
CRNDE-210ENST00000560912 NPHP3Q7Z494 1330 aa28.66■■■□□ 2.18
CRNDE-210ENST00000560912 CCDC144AA2RUR9 1427 aa28.65■■■□□ 2.18
CRNDE-210ENST00000560912 ADGRF5Q8IZF2 1346 aa28.65■■■□□ 2.18
CRNDE-210ENST00000560912 KIF1AQ12756 1690 aa28.64■■■□□ 2.17
CRNDE-210ENST00000560912 ATAD2Q6PL18 1390 aa28.63■■■□□ 2.17
CRNDE-210ENST00000560912 TRPC5Q9UL62 973 aaPredicted RBP28.63■■■□□ 2.17
CRNDE-210ENST00000560912 LRPPRCP42704 1394 aaKnown RBP28.62■■■□□ 2.17
CRNDE-210ENST00000560912 FOXD1Q16676 465 aa28.61■■■□□ 2.17
CRNDE-210ENST00000560912 EP400Q96L91 3159 aa28.61■■■□□ 2.17
CRNDE-210ENST00000560912 ANKRD30BQ9BXX2 1392 aa28.61■■■□□ 2.17
CRNDE-210ENST00000560912 PIK3C2GO75747 1445 aa28.6■■■□□ 2.17
CRNDE-210ENST00000560912 BCL9LQ86UU0 1499 aa28.6■■■□□ 2.17
CRNDE-210ENST00000560912 ESCO1Q5FWF5 840 aa28.6■■■□□ 2.17
CRNDE-210ENST00000560912 ABCC11Q96J66 1382 aa28.58■■■□□ 2.17
CRNDE-210ENST00000560912 RGPD8O14715 1765 aaPredicted RBP28.57■■■□□ 2.16
CRNDE-210ENST00000560912 PLEKHH1Q9ULM0 1364 aa28.56■■■□□ 2.16
CRNDE-210ENST00000560912 FOXO3O43524 673 aa28.54■■■□□ 2.16
CRNDE-210ENST00000560912 WAPLQ7Z5K2 1190 aa28.54■■■□□ 2.16
CRNDE-210ENST00000560912 USP32Q8NFA0 1604 aa28.54■■■□□ 2.16
CRNDE-210ENST00000560912 XPCQ01831 940 aaPredicted RBP28.53■■■□□ 2.16
CRNDE-210ENST00000560912 YTHDC2Q9H6S0 1430 aaKnown RBP28.52■■■□□ 2.16
CRNDE-210ENST00000560912 STK26Q9P289 416 aa28.52■■■□□ 2.16
CRNDE-210ENST00000560912 GLI3P10071 1580 aa28.51■■■□□ 2.15
CRNDE-210ENST00000560912 RGL3Q3MIN7 710 aa28.51■■■□□ 2.15
CRNDE-210ENST00000560912 ABCA3Q99758 1704 aa28.51■■■□□ 2.15
CRNDE-210ENST00000560912 SLIT2O94813 1529 aa28.5■■■□□ 2.15
CRNDE-210ENST00000560912 NRXN1Q9ULB1 1477 aa28.49■■■□□ 2.15
CRNDE-210ENST00000560912 SRCAPQ6ZRS2 3230 aa28.49■■■□□ 2.15
CRNDE-210ENST00000560912 BRWD3Q6RI45 1802 aa28.48■■■□□ 2.15
CRNDE-210ENST00000560912 TMEM132EQ6IEE7 984 aa28.48■■■□□ 2.15
CRNDE-210ENST00000560912 MPHOSPH9Q99550 1183 aa28.48■■■□□ 2.15
CRNDE-210ENST00000560912 NUTM2FA1L443 756 aa28.47■■■□□ 2.15
CRNDE-210ENST00000560912 SPATA31A3Q5VYP0 1347 aa28.46■■■□□ 2.15
CRNDE-210ENST00000560912 PLCH1Q4KWH8 1693 aa28.46■■■□□ 2.15
CRNDE-210ENST00000560912 NWD2Q9ULI1 1742 aa28.45■■■□□ 2.14
CRNDE-210ENST00000560912 GJD4Q96KN9 370 aaPredicted RBP28.44■■■□□ 2.14
CRNDE-210ENST00000560912 RALGAPBQ86X10 1494 aa28.44■■■□□ 2.14
CRNDE-210ENST00000560912 SIRT1Q96EB6 747 aa28.42■■■□□ 2.14
CRNDE-210ENST00000560912 TNS3Q68CZ2 1445 aa28.42■■■□□ 2.14
CRNDE-210ENST00000560912 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
CRNDE-210ENST00000560912 CCDC125Q86Z20 511 aa28.38■■■□□ 2.13
CRNDE-210ENST00000560912 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
CRNDE-210ENST00000560912 C14orf93Q9H972 538 aaKnown RBP28.38■■■□□ 2.13
CRNDE-210ENST00000560912 DLC1Q96QB1 1528 aa28.38■■■□□ 2.13
CRNDE-210ENST00000560912 KRT28Q7Z3Y7 464 aa28.36■■■□□ 2.13
CRNDE-210ENST00000560912 TRPM3Q9HCF6 1732 aaPredicted RBP28.35■■■□□ 2.13
CRNDE-210ENST00000560912 NRAPQ86VF7 1730 aa28.33■■■□□ 2.13
CRNDE-210ENST00000560912 ZRANB1Q9UGI0 708 aa28.33■■■□□ 2.13
CRNDE-210ENST00000560912 PHF8Q9UPP1 1060 aa28.33■■■□□ 2.13
CRNDE-210ENST00000560912 SBNO1A3KN83 1393 aa28.33■■■□□ 2.13
CRNDE-210ENST00000560912 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
CRNDE-210ENST00000560912 BLMP54132 1417 aaPredicted RBP28.32■■■□□ 2.12
CRNDE-210ENST00000560912 ADGRB1O14514 1584 aa28.32■■■□□ 2.12
CRNDE-210ENST00000560912 CFAP70Q5T0N1 1121 aa28.31■■■□□ 2.12
CRNDE-210ENST00000560912 ANKARQ7Z5J8 1434 aa28.31■■■□□ 2.12
CRNDE-210ENST00000560912 ALS2Q96Q42 1657 aa28.3■■■□□ 2.12
CRNDE-210ENST00000560912 ACIN1Q9UKV3 1341 aaKnown RBP28.29■■■□□ 2.12
CRNDE-210ENST00000560912 ARHGEF10O15013 1369 aa28.28■■■□□ 2.12
CRNDE-210ENST00000560912 PSME1Q06323 249 aa28.28■■■□□ 2.12
CRNDE-210ENST00000560912 CRYBG1Q9Y4K1 1723 aa28.27■■■□□ 2.12
CRNDE-210ENST00000560912 PRAM1Q96QH2 718 aa28.27■■■□□ 2.12
CRNDE-210ENST00000560912 VPS72Q15906 364 aa28.25■■■□□ 2.11
CRNDE-210ENST00000560912 CABLES1Q8TDN4 633 aa28.25■■■□□ 2.11
CRNDE-210ENST00000560912 HAP1P54257 671 aaPredicted RBP28.23■■■□□ 2.11
CRNDE-210ENST00000560912 SAFB2Q14151 953 aaKnown RBP eCLIP28.22■■■□□ 2.11
CRNDE-210ENST00000560912 COL14A1Q05707 1796 aaKnown RBP28.22■■■□□ 2.11
CRNDE-210ENST00000560912 SEPT12Q8IYM1 358 aa28.21■■■□□ 2.11
CRNDE-210ENST00000560912 TULP4Q9NRJ4 1543 aa28.2■■■□□ 2.1
CRNDE-210ENST00000560912 ONECUT3O60422 494 aaPredicted RBP28.2■■■□□ 2.1
CRNDE-210ENST00000560912 ITSN1Q15811 1721 aa28.18■■■□□ 2.1
CRNDE-210ENST00000560912 ARHGEF28Q8N1W1 1705 aaKnown RBP28.17■■■□□ 2.1
CRNDE-210ENST00000560912 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
CRNDE-210ENST00000560912 PMFBP1Q8TBY8 1022 aa28.16■■■□□ 2.1
CRNDE-210ENST00000560912 POGKQ9P215 609 aa28.16■■■□□ 2.1
CRNDE-210ENST00000560912 LRP5O75197 1615 aa28.16■■■□□ 2.1
CRNDE-210ENST00000560912 EIF3AQ14152 1382 aaKnown RBP28.15■■■□□ 2.1
CRNDE-210ENST00000560912 LMOD2Q6P5Q4 547 aa28.15■■■□□ 2.1
CRNDE-210ENST00000560912 DEFB132Q7Z7B7 95 aa28.15■■■□□ 2.1
CRNDE-210ENST00000560912 FAM83GA6ND36 823 aa28.14■■■□□ 2.1
CRNDE-210ENST00000560912 PLEKHG5O94827 1062 aa28.14■■■□□ 2.1
CRNDE-210ENST00000560912 PRR36Q9H6K5 1346 aa28.13■■■□□ 2.09
CRNDE-210ENST00000560912 RGPD1P0DJD0 1748 aa28.12■■■□□ 2.09
CRNDE-210ENST00000560912 CCDC9Q9Y3X0 531 aaKnown RBP28.12■■■□□ 2.09
CRNDE-210ENST00000560912 THSD7AQ9UPZ6 1657 aa28.11■■■□□ 2.09
CRNDE-210ENST00000560912 KRT27Q7Z3Y8 459 aa28.11■■■□□ 2.09
CRNDE-210ENST00000560912 SF3B2Q13435 895 aaKnown RBP28.09■■■□□ 2.09
CRNDE-210ENST00000560912 HIRIP3Q9BW71 556 aaPredicted RBP28.09■■■□□ 2.09
CRNDE-210ENST00000560912 TRAK1Q9UPV9 953 aa28.09■■■□□ 2.09
CRNDE-210ENST00000560912 PHRF1Q9P1Y6 1649 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms