RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 MAPK8IP2Q13387 824 aaPredicted RBP11.59□□□□□ -0.55
APH1B-209ENST00000560716 BCL9LQ86UU0 1499 aa11.58□□□□□ -0.56
APH1B-209ENST00000560716 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
APH1B-209ENST00000560716 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
APH1B-209ENST00000560716 CDC42BPGQ6DT37 1551 aa11.58□□□□□ -0.56
APH1B-209ENST00000560716 LOC105371045A0A1W2PR82 267 aa11.57□□□□□ -0.56
APH1B-209ENST00000560716 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
APH1B-209ENST00000560716 NUTM2DQ5VT03 806 aaPredicted RBP11.57□□□□□ -0.56
APH1B-209ENST00000560716 USP21Q9UK80 565 aa11.57□□□□□ -0.56
APH1B-209ENST00000560716 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
APH1B-209ENST00000560716 PXDNQ92626 1479 aa11.56□□□□□ -0.56
APH1B-209ENST00000560716 NUP155O75694 1391 aa11.55□□□□□ -0.56
APH1B-209ENST00000560716 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
APH1B-209ENST00000560716 PPLO60437 1756 aa11.55□□□□□ -0.56
APH1B-209ENST00000560716 DDX17Q92841 729 aaKnown RBP11.55□□□□□ -0.56
APH1B-209ENST00000560716 GLI3P10071 1580 aa11.54□□□□□ -0.56
APH1B-209ENST00000560716 NWD2Q9ULI1 1742 aa11.54□□□□□ -0.56
APH1B-209ENST00000560716 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
APH1B-209ENST00000560716 SLIT2O94813 1529 aa11.53□□□□□ -0.56
APH1B-209ENST00000560716 ROBO2Q9HCK4 1378 aa11.53□□□□□ -0.56
APH1B-209ENST00000560716 ADAMTS2O95450 1211 aa11.52□□□□□ -0.57
APH1B-209ENST00000560716 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
APH1B-209ENST00000560716 KNDC1Q76NI1 1749 aa11.52□□□□□ -0.57
APH1B-209ENST00000560716 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
APH1B-209ENST00000560716 ORAI2Q96SN7 254 aa11.51□□□□□ -0.57
APH1B-209ENST00000560716 KIF1AQ12756 1690 aa11.51□□□□□ -0.57
APH1B-209ENST00000560716 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
APH1B-209ENST00000560716 TECPR2O15040 1411 aa11.5□□□□□ -0.57
APH1B-209ENST00000560716 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
APH1B-209ENST00000560716 FMN2Q9NZ56 1722 aa11.49□□□□□ -0.57
APH1B-209ENST00000560716 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
APH1B-209ENST00000560716 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
APH1B-209ENST00000560716 RPGRIP1LQ68CZ1 1315 aa11.49□□□□□ -0.57
APH1B-209ENST00000560716 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
APH1B-209ENST00000560716 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
APH1B-209ENST00000560716 ABCA3Q99758 1704 aa11.48□□□□□ -0.57
APH1B-209ENST00000560716 IFT172Q9UG01 1749 aa11.48□□□□□ -0.57
APH1B-209ENST00000560716 PLCH1Q4KWH8 1693 aa11.46□□□□□ -0.57
APH1B-209ENST00000560716 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
APH1B-209ENST00000560716 UNC5CLQ8IV45 518 aa11.46□□□□□ -0.57
APH1B-209ENST00000560716 ZBTB22O15209 634 aa11.45□□□□□ -0.58
APH1B-209ENST00000560716 RGPD1P0DJD0 1748 aa11.44□□□□□ -0.58
APH1B-209ENST00000560716 NRAPQ86VF7 1730 aa11.44□□□□□ -0.58
APH1B-209ENST00000560716 RGPD8O14715 1765 aaPredicted RBP11.44□□□□□ -0.58
APH1B-209ENST00000560716 SPATA31A3Q5VYP0 1347 aa11.43□□□□□ -0.58
APH1B-209ENST00000560716 CCDC144AA2RUR9 1427 aa11.43□□□□□ -0.58
APH1B-209ENST00000560716 NAIPQ13075 1403 aa11.43□□□□□ -0.58
APH1B-209ENST00000560716 ABCC11Q96J66 1382 aa11.42□□□□□ -0.58
APH1B-209ENST00000560716 VPS72Q15906 364 aa11.42□□□□□ -0.58
APH1B-209ENST00000560716 ESCO1Q5FWF5 840 aa11.41□□□□□ -0.58
APH1B-209ENST00000560716 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
APH1B-209ENST00000560716 DISP2A7MBM2 1401 aa11.41□□□□□ -0.58
APH1B-209ENST00000560716 TNS1Q9HBL0 1735 aaKnown RBP11.4□□□□□ -0.58
APH1B-209ENST00000560716 FOXO3O43524 673 aa11.4□□□□□ -0.58
APH1B-209ENST00000560716 SBNO1A3KN83 1393 aa11.39□□□□□ -0.59
APH1B-209ENST00000560716 TRPM3Q9HCF6 1732 aaPredicted RBP11.38□□□□□ -0.59
APH1B-209ENST00000560716 CRYBG1Q9Y4K1 1723 aa11.38□□□□□ -0.59
APH1B-209ENST00000560716 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
APH1B-209ENST00000560716 DEFB132Q7Z7B7 95 aa11.38□□□□□ -0.59
APH1B-209ENST00000560716 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
APH1B-209ENST00000560716 THSD7AQ9UPZ6 1657 aa11.38□□□□□ -0.59
APH1B-209ENST00000560716 NRXN1Q9ULB1 1477 aa11.38□□□□□ -0.59
APH1B-209ENST00000560716 ALS2Q96Q42 1657 aa11.37□□□□□ -0.59
APH1B-209ENST00000560716 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
APH1B-209ENST00000560716 RRBP1Q9P2E9 1410 aaKnown RBP11.37□□□□□ -0.59
APH1B-209ENST00000560716 COL14A1Q05707 1796 aaKnown RBP11.37□□□□□ -0.59
APH1B-209ENST00000560716 HRCP23327 699 aa11.37□□□□□ -0.59
APH1B-209ENST00000560716 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
APH1B-209ENST00000560716 KRT27Q7Z3Y8 459 aa11.36□□□□□ -0.59
APH1B-209ENST00000560716 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
APH1B-209ENST00000560716 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
APH1B-209ENST00000560716 ADGRB2O60241 1585 aa11.35□□□□□ -0.59
APH1B-209ENST00000560716 RREB1Q92766 1687 aa11.34□□□□□ -0.59
APH1B-209ENST00000560716 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
APH1B-209ENST00000560716 BAG6P46379 1132 aa11.34□□□□□ -0.59
APH1B-209ENST00000560716 KRT28Q7Z3Y7 464 aa11.34□□□□□ -0.59
APH1B-209ENST00000560716 ANKARQ7Z5J8 1434 aa11.33□□□□□ -0.6
APH1B-209ENST00000560716 YTHDC2Q9H6S0 1430 aaKnown RBP11.33□□□□□ -0.6
APH1B-209ENST00000560716 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
APH1B-209ENST00000560716 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
APH1B-209ENST00000560716 XPCQ01831 940 aaPredicted RBP11.32□□□□□ -0.6
APH1B-209ENST00000560716 PSME1Q06323 249 aa11.32□□□□□ -0.6
APH1B-209ENST00000560716 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
APH1B-209ENST00000560716 PARD3Q8TEW0 1356 aa11.31□□□□□ -0.6
APH1B-209ENST00000560716 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
APH1B-209ENST00000560716 FAM83GA6ND36 823 aa11.3□□□□□ -0.6
APH1B-209ENST00000560716 PHF8Q9UPP1 1060 aa11.3□□□□□ -0.6
APH1B-209ENST00000560716 NUP188Q5SRE5 1749 aa11.29□□□□□ -0.6
APH1B-209ENST00000560716 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
APH1B-209ENST00000560716 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
APH1B-209ENST00000560716 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
APH1B-209ENST00000560716 SPATA31A5Q5VU36 1347 aa11.28□□□□□ -0.6
APH1B-209ENST00000560716 SPATA31A7Q8IWB4 1347 aa11.28□□□□□ -0.6
APH1B-209ENST00000560716 ITGAEP38570 1179 aa11.27□□□□□ -0.61
APH1B-209ENST00000560716 C14orf93Q9H972 538 aaKnown RBP11.27□□□□□ -0.61
APH1B-209ENST00000560716 PSDA5PKW4 1024 aaPredicted RBP11.26□□□□□ -0.61
APH1B-209ENST00000560716 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
APH1B-209ENST00000560716 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
APH1B-209ENST00000560716 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
APH1B-209ENST00000560716 PHRF1Q9P1Y6 1649 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms