RNA–Protein interactions for RNA: ENST00000560595.5

ETFA-215, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 1 (best)

Gene ETFA, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-215ENST00000560595 NBPF1Q3BBV0 1214 aa29.4■■■□□ 2.3
ETFA-215ENST00000560595 TRAK1Q9UPV9 953 aa29.4■■■□□ 2.3
ETFA-215ENST00000560595 SLAIN2Q9P270 581 aa29.39■■■□□ 2.3
ETFA-215ENST00000560595 CCER1Q8TC90 406 aaPredicted RBP29.38■■■□□ 2.29
ETFA-215ENST00000560595 MST1RQ04912 1400 aa29.37■■■□□ 2.29
ETFA-215ENST00000560595 PRAM1Q96QH2 718 aa29.37■■■□□ 2.29
ETFA-215ENST00000560595 NBPF8Q3BBV2 869 aa29.36■■■□□ 2.29
ETFA-215ENST00000560595 FMN2Q9NZ56 1722 aa29.32■■■□□ 2.28
ETFA-215ENST00000560595 SAFB2Q14151 953 aaKnown RBP eCLIP29.32■■■□□ 2.28
ETFA-215ENST00000560595 POGKQ9P215 609 aa29.32■■■□□ 2.28
ETFA-215ENST00000560595 HSPA1LP34931 641 aa29.31■■■□□ 2.28
ETFA-215ENST00000560595 ADGRB2O60241 1585 aa29.3■■■□□ 2.28
ETFA-215ENST00000560595 RALGAPBQ86X10 1494 aa29.29■■■□□ 2.28
ETFA-215ENST00000560595 ROCK2O75116 1388 aaKnown RBP29.28■■■□□ 2.28
ETFA-215ENST00000560595 C1orf167Q5SNV9 1468 aa29.28■■■□□ 2.28
ETFA-215ENST00000560595 PHLPP1O60346 1717 aa29.27■■■□□ 2.28
ETFA-215ENST00000560595 RGPD8O14715 1765 aaPredicted RBP29.25■■■□□ 2.27
ETFA-215ENST00000560595 BRINP3Q76B58 766 aa29.24■■■□□ 2.27
ETFA-215ENST00000560595 QRICH2Q9H0J4 1663 aa29.24■■■□□ 2.27
ETFA-215ENST00000560595 GPRASP1Q5JY77 1395 aa29.24■■■□□ 2.27
ETFA-215ENST00000560595 NHSL1Q5SYE7 1610 aa29.23■■■□□ 2.27
ETFA-215ENST00000560595 AHDC1Q5TGY3 1603 aaPredicted RBP29.23■■■□□ 2.27
ETFA-215ENST00000560595 MINK1Q8N4C8 1332 aaPredicted RBP29.22■■■□□ 2.27
ETFA-215ENST00000560595 HIRIP3Q9BW71 556 aaPredicted RBP29.2■■■□□ 2.26
ETFA-215ENST00000560595 TIMELESSQ9UNS1 1208 aa29.2■■■□□ 2.26
ETFA-215ENST00000560595 COL16A1Q07092 1604 aaPredicted RBP29.19■■■□□ 2.26
ETFA-215ENST00000560595 USP32Q8NFA0 1604 aa29.19■■■□□ 2.26
ETFA-215ENST00000560595 NUTM2FA1L443 756 aa29.18■■■□□ 2.26
ETFA-215ENST00000560595 ORAI2Q96SN7 254 aa29.16■■■□□ 2.26
ETFA-215ENST00000560595 CENPJQ9HC77 1338 aaPredicted RBP29.16■■■□□ 2.26
ETFA-215ENST00000560595 CARD11Q9BXL7 1154 aa29.14■■■□□ 2.26
ETFA-215ENST00000560595 KIF1AQ12756 1690 aa29.13■■■□□ 2.25
ETFA-215ENST00000560595 TULP4Q9NRJ4 1543 aa29.13■■■□□ 2.25
ETFA-215ENST00000560595 WASLO00401 505 aaPredicted RBP29.11■■■□□ 2.25
ETFA-215ENST00000560595 ESCO1Q5FWF5 840 aa29.11■■■□□ 2.25
ETFA-215ENST00000560595 EIF3AQ14152 1382 aaKnown RBP29.11■■■□□ 2.25
ETFA-215ENST00000560595 ANKARQ7Z5J8 1434 aa29.11■■■□□ 2.25
ETFA-215ENST00000560595 DDX17Q92841 729 aaKnown RBP29.09■■■□□ 2.25
ETFA-215ENST00000560595 ITSN1Q15811 1721 aa29.08■■■□□ 2.25
ETFA-215ENST00000560595 PRR36Q9H6K5 1346 aa29.05■■■□□ 2.24
ETFA-215ENST00000560595 ATP7BP35670 1465 aa29.04■■■□□ 2.24
ETFA-215ENST00000560595 TOPAZ1Q8N9V7 1692 aa29.04■■■□□ 2.24
ETFA-215ENST00000560595 SHPRHQ149N8 1683 aa29.03■■■□□ 2.24
ETFA-215ENST00000560595 CDK19Q9BWU1 502 aa29.03■■■□□ 2.24
ETFA-215ENST00000560595 PXDNQ92626 1479 aa29.01■■■□□ 2.23
ETFA-215ENST00000560595 PHF8Q9UPP1 1060 aa29■■■□□ 2.23
ETFA-215ENST00000560595 JCADQ9P266 1359 aa29■■■□□ 2.23
ETFA-215ENST00000560595 NPHP3Q7Z494 1330 aa28.99■■■□□ 2.23
ETFA-215ENST00000560595 SOS2Q07890 1332 aaPredicted RBP28.98■■■□□ 2.23
ETFA-215ENST00000560595 FOXO3O43524 673 aa28.98■■■□□ 2.23
ETFA-215ENST00000560595 MED1Q15648 1581 aaPredicted RBP28.97■■■□□ 2.23
ETFA-215ENST00000560595 NUDT16Q96DE0 195 aaKnown RBP28.97■■■□□ 2.23
ETFA-215ENST00000560595 SBNO2Q9Y2G9 1366 aa28.97■■■□□ 2.23
ETFA-215ENST00000560595 USP47Q96K76 1375 aa28.94■■■□□ 2.22
ETFA-215ENST00000560595 SRPK2P78362 688 aaKnown RBP28.94■■■□□ 2.22
ETFA-215ENST00000560595 XPCQ01831 940 aaPredicted RBP28.94■■■□□ 2.22
ETFA-215ENST00000560595 PMFBP1Q8TBY8 1022 aa28.94■■■□□ 2.22
ETFA-215ENST00000560595 EVC2Q86UK5 1308 aa28.94■■■□□ 2.22
ETFA-215ENST00000560595 CABP2Q9NPB3 220 aa28.93■■■□□ 2.22
ETFA-215ENST00000560595 LRRC59Q96AG4 307 aaKnown RBP28.92■■■□□ 2.22
ETFA-215ENST00000560595 ST20-MTHFSA0A0A6YYL1 179 aa28.9■■■□□ 2.22
ETFA-215ENST00000560595 TRPM3Q9HCF6 1732 aaPredicted RBP28.9■■■□□ 2.22
ETFA-215ENST00000560595 PNPLA6Q8IY17 1366 aa28.89■■■□□ 2.22
ETFA-215ENST00000560595 CCDC61Q9Y6R9 512 aa28.88■■■□□ 2.21
ETFA-215ENST00000560595 COL22A1Q8NFW1 1626 aaPredicted RBP28.87■■■□□ 2.21
ETFA-215ENST00000560595 KRT28Q7Z3Y7 464 aa28.87■■■□□ 2.21
ETFA-215ENST00000560595 PPIP5K1Q6PFW1 1433 aa28.86■■■□□ 2.21
ETFA-215ENST00000560595 TESK2Q96S53 571 aa28.86■■■□□ 2.21
ETFA-215ENST00000560595 PSME1Q06323 249 aa28.85■■■□□ 2.21
ETFA-215ENST00000560595 LRP6O75581 1613 aa28.84■■■□□ 2.21
ETFA-215ENST00000560595 NGDNQ8NEJ9 315 aaKnown RBP28.84■■■□□ 2.21
ETFA-215ENST00000560595 SPATA31A6Q5VVP1 1343 aa28.84■■■□□ 2.21
ETFA-215ENST00000560595 POLR3AO14802 1390 aaPredicted RBP28.83■■■□□ 2.21
ETFA-215ENST00000560595 PLEKHG3A1L390 1219 aa28.82■■■□□ 2.2
ETFA-215ENST00000560595 TNS3Q68CZ2 1445 aa28.82■■■□□ 2.2
ETFA-215ENST00000560595 ALS2Q96Q42 1657 aa28.82■■■□□ 2.2
ETFA-215ENST00000560595 SBNO1A3KN83 1393 aa28.81■■■□□ 2.2
ETFA-215ENST00000560595 SPATA31A3Q5VYP0 1347 aa28.81■■■□□ 2.2
ETFA-215ENST00000560595 ACEP12821 1306 aa28.8■■■□□ 2.2
ETFA-215ENST00000560595 ATAD2Q6PL18 1390 aa28.79■■■□□ 2.2
ETFA-215ENST00000560595 AKAP12Q02952 1782 aa28.79■■■□□ 2.2
ETFA-215ENST00000560595 CABP1Q9NZU7 370 aa28.77■■■□□ 2.2
ETFA-215ENST00000560595 DISP3Q9P2K9 1392 aa28.76■■■□□ 2.2
ETFA-215ENST00000560595 NUTM2BA6NNL0 878 aaPredicted RBP28.76■■■□□ 2.19
ETFA-215ENST00000560595 NUTM2EB1AL46 878 aaPredicted RBP28.76■■■□□ 2.19
ETFA-215ENST00000560595 NUTM2AQ8IVF1 878 aaPredicted RBP28.76■■■□□ 2.19
ETFA-215ENST00000560595 ABCA3Q99758 1704 aa28.76■■■□□ 2.19
ETFA-215ENST00000560595 SLC24A1O60721 1099 aa28.73■■■□□ 2.19
ETFA-215ENST00000560595 MARF1Q9Y4F3 1742 aaKnown RBP28.72■■■□□ 2.19
ETFA-215ENST00000560595 ARHGEF10O15013 1369 aa28.72■■■□□ 2.19
ETFA-215ENST00000560595 MON2Q7Z3U7 1717 aa28.71■■■□□ 2.19
ETFA-215ENST00000560595 CRYBG1Q9Y4K1 1723 aa28.7■■■□□ 2.19
ETFA-215ENST00000560595 EIF4G2P78344 907 aaKnown RBP eCLIP28.7■■■□□ 2.18
ETFA-215ENST00000560595 LMOD2Q6P5Q4 547 aa28.7■■■□□ 2.18
ETFA-215ENST00000560595 PUS7Q96PZ0 661 aaKnown RBP28.7■■■□□ 2.18
ETFA-215ENST00000560595 PAK3O75914 559 aaPredicted RBP28.69■■■□□ 2.18
ETFA-215ENST00000560595 TMF1P82094 1093 aa28.69■■■□□ 2.18
ETFA-215ENST00000560595 USP6P35125 1406 aa28.69■■■□□ 2.18
ETFA-215ENST00000560595 NRKQ7Z2Y5 1582 aa28.68■■■□□ 2.18
ETFA-215ENST00000560595 HSPA5P11021 654 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 1113.5 ms