RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 LRRC59Q96AG4 307 aaKnown RBP26.62■■□□□ 1.85
RPL28-210ENST00000560583 FMN2Q9NZ56 1722 aa26.61■■□□□ 1.85
RPL28-210ENST00000560583 COL22A1Q8NFW1 1626 aaPredicted RBP26.61■■□□□ 1.85
RPL28-210ENST00000560583 PLEKHH1Q9ULM0 1364 aa26.59■■□□□ 1.85
RPL28-210ENST00000560583 ZNF772Q68DY9 489 aaPredicted RBP26.59■■□□□ 1.85
RPL28-210ENST00000560583 SOS2Q07890 1332 aaPredicted RBP26.59■■□□□ 1.85
RPL28-210ENST00000560583 ACIN1Q9UKV3 1341 aaKnown RBP26.59■■□□□ 1.85
RPL28-210ENST00000560583 ABCC11Q96J66 1382 aa26.58■■□□□ 1.85
RPL28-210ENST00000560583 YTHDC2Q9H6S0 1430 aaKnown RBP26.58■■□□□ 1.85
RPL28-210ENST00000560583 TMEM132EQ6IEE7 984 aa26.57■■□□□ 1.84
RPL28-210ENST00000560583 STK26Q9P289 416 aa26.57■■□□□ 1.84
RPL28-210ENST00000560583 PXDNQ92626 1479 aa26.56■■□□□ 1.84
RPL28-210ENST00000560583 WAPLQ7Z5K2 1190 aa26.56■■□□□ 1.84
RPL28-210ENST00000560583 AFF2P51816 1311 aa26.55■■□□□ 1.84
RPL28-210ENST00000560583 KIF1AQ12756 1690 aa26.51■■□□□ 1.83
RPL28-210ENST00000560583 CDK12Q9NYV4 1490 aaPredicted RBP26.51■■□□□ 1.83
RPL28-210ENST00000560583 RGPD8O14715 1765 aaPredicted RBP26.51■■□□□ 1.83
RPL28-210ENST00000560583 C14orf93Q9H972 538 aaKnown RBP26.5■■□□□ 1.83
RPL28-210ENST00000560583 MARF1Q9Y4F3 1742 aaKnown RBP26.49■■□□□ 1.83
RPL28-210ENST00000560583 C8orf37Q96NL8 207 aa26.48■■□□□ 1.83
RPL28-210ENST00000560583 ADGRB1O14514 1584 aa26.48■■□□□ 1.83
RPL28-210ENST00000560583 ESCO1Q5FWF5 840 aa26.47■■□□□ 1.83
RPL28-210ENST00000560583 NPHP3Q7Z494 1330 aa26.46■■□□□ 1.83
RPL28-210ENST00000560583 CFAP70Q5T0N1 1121 aa26.46■■□□□ 1.83
RPL28-210ENST00000560583 DLC1Q96QB1 1528 aa26.45■■□□□ 1.83
RPL28-210ENST00000560583 RXRBP28702 533 aa26.45■■□□□ 1.82
RPL28-210ENST00000560583 NUTM2FA1L443 756 aa26.44■■□□□ 1.82
RPL28-210ENST00000560583 RGS12O14924 1447 aa26.44■■□□□ 1.82
RPL28-210ENST00000560583 ADAMTS2O95450 1211 aa26.43■■□□□ 1.82
RPL28-210ENST00000560583 ADGRB2O60241 1585 aa26.42■■□□□ 1.82
RPL28-210ENST00000560583 SIRT1Q96EB6 747 aa26.42■■□□□ 1.82
RPL28-210ENST00000560583 USP32Q8NFA0 1604 aa26.42■■□□□ 1.82
RPL28-210ENST00000560583 FOXO3O43524 673 aa26.41■■□□□ 1.82
RPL28-210ENST00000560583 XPCQ01831 940 aaPredicted RBP26.41■■□□□ 1.82
RPL28-210ENST00000560583 DHX57Q6P158 1386 aaKnown RBP26.41■■□□□ 1.82
RPL28-210ENST00000560583 NGLY1Q96IV0 654 aa26.37■■□□□ 1.81
RPL28-210ENST00000560583 UPF1Q92900 1129 aaKnown RBP eCLIP26.36■■□□□ 1.812e-8■■■■■ 50.2
RPL28-210ENST00000560583 QTRT2Q9H974 415 aaKnown RBP26.36■■□□□ 1.81
RPL28-210ENST00000560583 PRAM1Q96QH2 718 aa26.35■■□□□ 1.81
RPL28-210ENST00000560583 ABCA3Q99758 1704 aa26.35■■□□□ 1.81
RPL28-210ENST00000560583 RBM6P78332 1123 aaKnown RBP26.34■■□□□ 1.81
RPL28-210ENST00000560583 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.34■■□□□ 1.81
RPL28-210ENST00000560583 HRCP23327 699 aa26.33■■□□□ 1.81
RPL28-210ENST00000560583 ARHGEF28Q8N1W1 1705 aaKnown RBP26.33■■□□□ 1.81
RPL28-210ENST00000560583 ATRNO75882 1429 aa26.32■■□□□ 1.8
RPL28-210ENST00000560583 SAFB2Q14151 953 aaKnown RBP eCLIP26.32■■□□□ 1.8
RPL28-210ENST00000560583 FNBP4Q8N3X1 1017 aaPredicted RBP26.32■■□□□ 1.8
RPL28-210ENST00000560583 SPATA31A3Q5VYP0 1347 aa26.31■■□□□ 1.8
RPL28-210ENST00000560583 BCL9LQ86UU0 1499 aa26.3■■□□□ 1.8
RPL28-210ENST00000560583 USP21Q9UK80 565 aa26.3■■□□□ 1.8
RPL28-210ENST00000560583 TNS3Q68CZ2 1445 aa26.29■■□□□ 1.8
RPL28-210ENST00000560583 ANKARQ7Z5J8 1434 aa26.29■■□□□ 1.8
RPL28-210ENST00000560583 TRPM3Q9HCF6 1732 aaPredicted RBP26.28■■□□□ 1.8
RPL28-210ENST00000560583 DCAF11Q8TEB1 546 aa26.28■■□□□ 1.8
RPL28-210ENST00000560583 PHF8Q9UPP1 1060 aa26.27■■□□□ 1.8
RPL28-210ENST00000560583 KDM2AQ9Y2K7 1162 aa26.27■■□□□ 1.8
RPL28-210ENST00000560583 KRT28Q7Z3Y7 464 aa26.25■■□□□ 1.79
RPL28-210ENST00000560583 TRPC5Q9UL62 973 aaPredicted RBP26.25■■□□□ 1.79
RPL28-210ENST00000560583 TRAK1Q9UPV9 953 aa26.25■■□□□ 1.79
RPL28-210ENST00000560583 SLIT2O94813 1529 aa26.24■■□□□ 1.79
RPL28-210ENST00000560583 TULP4Q9NRJ4 1543 aa26.24■■□□□ 1.79
RPL28-210ENST00000560583 POGKQ9P215 609 aa26.24■■□□□ 1.79
RPL28-210ENST00000560583 PLCH1Q4KWH8 1693 aa26.24■■□□□ 1.79
RPL28-210ENST00000560583 KIAA1210Q9ULL0 1709 aa26.22■■□□□ 1.79
RPL28-210ENST00000560583 ALS2Q96Q42 1657 aa26.22■■□□□ 1.79
RPL28-210ENST00000560583 SBNO1A3KN83 1393 aa26.21■■□□□ 1.79
RPL28-210ENST00000560583 GLI3P10071 1580 aa26.21■■□□□ 1.79
RPL28-210ENST00000560583 HIRIP3Q9BW71 556 aaPredicted RBP26.21■■□□□ 1.79
RPL28-210ENST00000560583 PRR36Q9H6K5 1346 aa26.2■■□□□ 1.79
RPL28-210ENST00000560583 MINK1Q8N4C8 1332 aaPredicted RBP26.19■■□□□ 1.78
RPL28-210ENST00000560583 STAC3Q96MF2 364 aa26.19■■□□□ 1.78
RPL28-210ENST00000560583 ITSN1Q15811 1721 aa26.19■■□□□ 1.78
RPL28-210ENST00000560583 NWD2Q9ULI1 1742 aa26.19■■□□□ 1.78
RPL28-210ENST00000560583 CRYBG1Q9Y4K1 1723 aa26.19■■□□□ 1.78
RPL28-210ENST00000560583 PMFBP1Q8TBY8 1022 aa26.16■■□□□ 1.78
RPL28-210ENST00000560583 ATP7BP35670 1465 aa26.16■■□□□ 1.78
RPL28-210ENST00000560583 PSME1Q06323 249 aa26.15■■□□□ 1.78
RPL28-210ENST00000560583 ARHGEF10O15013 1369 aa26.15■■□□□ 1.78
RPL28-210ENST00000560583 EIF3AQ14152 1382 aaKnown RBP26.15■■□□□ 1.78
RPL28-210ENST00000560583 RALGAPBQ86X10 1494 aa26.15■■□□□ 1.78
RPL28-210ENST00000560583 TOPAZ1Q8N9V7 1692 aa26.15■■□□□ 1.78
RPL28-210ENST00000560583 CABLES1Q8TDN4 633 aa26.14■■□□□ 1.78
RPL28-210ENST00000560583 ATAD2Q6PL18 1390 aa26.14■■□□□ 1.78
RPL28-210ENST00000560583 NRAPQ86VF7 1730 aa26.14■■□□□ 1.77
RPL28-210ENST00000560583 EP400Q96L91 3159 aa26.12■■□□□ 1.77
RPL28-210ENST00000560583 BRWD3Q6RI45 1802 aa26.12■■□□□ 1.77
RPL28-210ENST00000560583 WASLO00401 505 aaPredicted RBP26.12■■□□□ 1.77
RPL28-210ENST00000560583 GJD4Q96KN9 370 aaPredicted RBP26.11■■□□□ 1.77
RPL28-210ENST00000560583 UNC5CLQ8IV45 518 aa26.1■■□□□ 1.77
RPL28-210ENST00000560583 PLEKHG5O94827 1062 aa26.08■■□□□ 1.77
RPL28-210ENST00000560583 LMOD2Q6P5Q4 547 aa26.07■■□□□ 1.76
RPL28-210ENST00000560583 COL14A1Q05707 1796 aaKnown RBP26.05■■□□□ 1.76
RPL28-210ENST00000560583 HAP1P54257 671 aaPredicted RBP26.05■■□□□ 1.76
RPL28-210ENST00000560583 GPRASP1Q5JY77 1395 aa26.05■■□□□ 1.76
RPL28-210ENST00000560583 PHRF1Q9P1Y6 1649 aaKnown RBP26.04■■□□□ 1.76
RPL28-210ENST00000560583 NBPF1Q3BBV0 1214 aa26.01■■□□□ 1.75
RPL28-210ENST00000560583 QRICH2Q9H0J4 1663 aa26.01■■□□□ 1.75
RPL28-210ENST00000560583 FAM83GA6ND36 823 aa25.99■■□□□ 1.75
RPL28-210ENST00000560583 VPS72Q15906 364 aa25.99■■□□□ 1.75
RPL28-210ENST00000560583 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms