RNA–Protein interactions for RNA: ENST00000560580.5

GCNT3-208, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, human

TSL 4

Gene GCNT3, Length 562 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCNT3-208	ENST00000560580	ADGRB2	O60241	1585 aa		13.98	□□□□□ -0.17
GCNT3-208	ENST00000560580	DDX10	Q13206	875 aa	Known RBP	13.98	□□□□□ -0.17
GCNT3-208	ENST00000560580	POLR3GL	Q9BT43	218 aa		13.98	□□□□□ -0.17
GCNT3-208	ENST00000560580	DMRT2	Q9Y5R5	561 aa		13.97	□□□□□ -0.17
GCNT3-208	ENST00000560580	TULP4	Q9NRJ4	1543 aa		13.96	□□□□□ -0.17
GCNT3-208	ENST00000560580	MYOM1	P52179	1685 aa		13.96	□□□□□ -0.17
GCNT3-208	ENST00000560580	NKTR	P30414	1462 aa	Known RBP	13.96	□□□□□ -0.17
GCNT3-208	ENST00000560580	KCNA6	P17658	529 aa		13.96	□□□□□ -0.17
GCNT3-208	ENST00000560580	ROBO2	Q9HCK4	1378 aa		13.96	□□□□□ -0.18
GCNT3-208	ENST00000560580	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
GCNT3-208	ENST00000560580	WAPL	Q7Z5K2	1190 aa		13.95	□□□□□ -0.18
GCNT3-208	ENST00000560580	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.95	□□□□□ -0.18
GCNT3-208	ENST00000560580	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.94	□□□□□ -0.18
GCNT3-208	ENST00000560580	ATAD2	Q6PL18	1390 aa		13.94	□□□□□ -0.18
GCNT3-208	ENST00000560580	PLEKHH1	Q9ULM0	1364 aa		13.94	□□□□□ -0.18
GCNT3-208	ENST00000560580	NINL	Q9Y2I6	1382 aa		13.94	□□□□□ -0.18
GCNT3-208	ENST00000560580	ITSN1	Q15811	1721 aa		13.93	□□□□□ -0.18
GCNT3-208	ENST00000560580	WASL	O00401	505 aa	Predicted RBP	13.91	□□□□□ -0.18
GCNT3-208	ENST00000560580	SRPK2	P78362	688 aa	Known RBP	13.91	□□□□□ -0.18
GCNT3-208	ENST00000560580	NALCN	Q8IZF0	1738 aa		13.9	□□□□□ -0.18
GCNT3-208	ENST00000560580	CDK19	Q9BWU1	502 aa		13.9	□□□□□ -0.18
GCNT3-208	ENST00000560580	STRCP1	A6NGW2	1772 aa		13.9	□□□□□ -0.18
GCNT3-208	ENST00000560580	NCOA3	Q9Y6Q9	1424 aa		13.9	□□□□□ -0.19
GCNT3-208	ENST00000560580	CDC42BPG	Q6DT37	1551 aa		13.89	□□□□□ -0.19
GCNT3-208	ENST00000560580	FMN2	Q9NZ56	1722 aa		13.89	□□□□□ -0.19
GCNT3-208	ENST00000560580	ANP32C	O43423	234 aa		13.87	□□□□□ -0.19
GCNT3-208	ENST00000560580	PROSER2	Q86WR7	435 aa	Predicted RBP	13.87	□□□□□ -0.19
GCNT3-208	ENST00000560580	CABP2	Q9NPB3	220 aa		13.87	□□□□□ -0.19
GCNT3-208	ENST00000560580	ADGRL3	Q9HAR2	1447 aa		13.87	□□□□□ -0.19
GCNT3-208	ENST00000560580	TOPAZ1	Q8N9V7	1692 aa		13.86	□□□□□ -0.19
GCNT3-208	ENST00000560580	TMC1	Q8TDI8	760 aa		13.86	□□□□□ -0.19
GCNT3-208	ENST00000560580	PANK3	Q9H999	370 aa		13.86	□□□□□ -0.19
GCNT3-208	ENST00000560580	ANKAR	Q7Z5J8	1434 aa		13.85	□□□□□ -0.19
GCNT3-208	ENST00000560580	RGPD8	O14715	1765 aa	Predicted RBP	13.85	□□□□□ -0.19
GCNT3-208	ENST00000560580	AKAP12	Q02952	1782 aa		13.85	□□□□□ -0.19
GCNT3-208	ENST00000560580	ATP7B	P35670	1465 aa		13.85	□□□□□ -0.19
GCNT3-208	ENST00000560580	ANKRD36B	Q8N2N9	1353 aa		13.84	□□□□□ -0.19
GCNT3-208	ENST00000560580	USP32	Q8NFA0	1604 aa		13.84	□□□□□ -0.19
GCNT3-208	ENST00000560580	C14orf37	Q86TY3	774 aa		13.84	□□□□□ -0.19
GCNT3-208	ENST00000560580	TERF2IP	Q9NYB0	399 aa		13.84	□□□□□ -0.19
GCNT3-208	ENST00000560580	KTN1	Q86UP2	1357 aa	Known RBP	13.83	□□□□□ -0.19
GCNT3-208	ENST00000560580	XIRP1	Q702N8	1843 aa	Known RBP	13.83	□□□□□ -0.2
GCNT3-208	ENST00000560580	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.83	□□□□□ -0.2
GCNT3-208	ENST00000560580	NUDT16	Q96DE0	195 aa	Known RBP	13.83	□□□□□ -0.2
GCNT3-208	ENST00000560580	KNSTRN	Q9Y448	316 aa		13.83	□□□□□ -0.2
GCNT3-208	ENST00000560580	CCDC61	Q9Y6R9	512 aa		13.83	□□□□□ -0.2
GCNT3-208	ENST00000560580	DCC	P43146	1447 aa		13.82	□□□□□ -0.2
GCNT3-208	ENST00000560580	PPIP5K1	Q6PFW1	1433 aa		13.82	□□□□□ -0.2
GCNT3-208	ENST00000560580	SLC12A5	Q9H2X9	1139 aa		13.81	□□□□□ -0.2
GCNT3-208	ENST00000560580	C19orf44	Q9H6X5	657 aa		13.81	□□□□□ -0.2
GCNT3-208	ENST00000560580	MON2	Q7Z3U7	1717 aa		13.81	□□□□□ -0.2
GCNT3-208	ENST00000560580	PER1	O15534	1290 aa	Predicted RBP	13.8	□□□□□ -0.2
GCNT3-208	ENST00000560580	KIF20B	Q96Q89	1820 aa		13.8	□□□□□ -0.2
GCNT3-208	ENST00000560580	TMEM94	Q12767	1356 aa		13.8	□□□□□ -0.2
GCNT3-208	ENST00000560580	NPC1L1	Q9UHC9	1359 aa		13.8	□□□□□ -0.2
GCNT3-208	ENST00000560580	ZNF692	Q9BU19	519 aa	Predicted RBP	13.79	□□□□□ -0.2
GCNT3-208	ENST00000560580	CABP1	Q9NZU7	370 aa		13.79	□□□□□ -0.2
GCNT3-208	ENST00000560580	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.79	□□□□□ -0.2
GCNT3-208	ENST00000560580	MSH6	P52701	1360 aa		13.79	□□□□□ -0.2
GCNT3-208	ENST00000560580	LRRC7	Q96NW7	1537 aa		13.79	□□□□□ -0.2
GCNT3-208	ENST00000560580	ANKRD26	Q9UPS8	1709 aa		13.78	□□□□□ -0.2
GCNT3-208	ENST00000560580	PLEKHG3	A1L390	1219 aa		13.78	□□□□□ -0.2
GCNT3-208	ENST00000560580	ATF3	P18847	181 aa		13.78	□□□□□ -0.2
GCNT3-208	ENST00000560580	MIER1	Q8N108	512 aa		13.78	□□□□□ -0.2
GCNT3-208	ENST00000560580		A0A1W2PP64	1363 aa		13.78	□□□□□ -0.2
GCNT3-208	ENST00000560580	KIF1A	Q12756	1690 aa		13.78	□□□□□ -0.2
GCNT3-208	ENST00000560580	NSD2	O96028	1365 aa		13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	CGNL1	Q0VF96	1302 aa		13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	CPSF1	Q10570	1443 aa	Known RBP	13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	RALBP1	Q15311	655 aa		13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	CADPS2	Q86UW7	1296 aa		13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	NSD3	Q9BZ95	1437 aa		13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	PRR36	Q9H6K5	1346 aa		13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	CD163L1	Q9NR16	1453 aa		13.77	□□□□□ -0.21
GCNT3-208	ENST00000560580	EDC4	Q6P2E9	1401 aa	Known RBP	13.75	□□□□□ -0.21
GCNT3-208	ENST00000560580	CCER2	I3L3R5	266 aa		13.75	□□□□□ -0.21
GCNT3-208	ENST00000560580	RBM33	Q96EV2	1170 aa	Known RBP	13.75	□□□□□ -0.21
GCNT3-208	ENST00000560580	POLR3A	O14802	1390 aa	Predicted RBP	13.74	□□□□□ -0.21
GCNT3-208	ENST00000560580	NUTM2F	A1L443	756 aa		13.74	□□□□□ -0.21
GCNT3-208	ENST00000560580	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.74	□□□□□ -0.21
GCNT3-208	ENST00000560580	CARD14	Q9BXL6	1004 aa		13.74	□□□□□ -0.21
GCNT3-208	ENST00000560580	NRK	Q7Z2Y5	1582 aa		13.74	□□□□□ -0.21
GCNT3-208	ENST00000560580	BRD4	O60885	1362 aa	Predicted RBP	13.73	□□□□□ -0.21
GCNT3-208	ENST00000560580	ACE	P12821	1306 aa		13.73	□□□□□ -0.21
GCNT3-208	ENST00000560580	NGDN	Q8NEJ9	315 aa	Known RBP	13.73	□□□□□ -0.21
GCNT3-208	ENST00000560580	PARD3	Q8TEW0	1356 aa		13.72	□□□□□ -0.21
GCNT3-208	ENST00000560580	LTBP4	Q8N2S1	1624 aa		13.72	□□□□□ -0.21
GCNT3-208	ENST00000560580	PHF8	Q9UPP1	1060 aa		13.72	□□□□□ -0.21
GCNT3-208	ENST00000560580	C1orf167	Q5SNV9	1468 aa		13.72	□□□□□ -0.21
GCNT3-208	ENST00000560580	MST1R	Q04912	1400 aa		13.72	□□□□□ -0.21
GCNT3-208	ENST00000560580	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.71	□□□□□ -0.21
GCNT3-208	ENST00000560580	CC2D1B	Q5T0F9	858 aa	Known RBP	13.71	□□□□□ -0.21
GCNT3-208	ENST00000560580	USP6	P35125	1406 aa		13.71	□□□□□ -0.22
GCNT3-208	ENST00000560580	TTC21A	Q8NDW8	1320 aa		13.7	□□□□□ -0.22
GCNT3-208	ENST00000560580	ESCO1	Q5FWF5	840 aa		13.7	□□□□□ -0.22
GCNT3-208	ENST00000560580	PMFBP1	Q8TBY8	1022 aa		13.69	□□□□□ -0.22
GCNT3-208	ENST00000560580	CNGB1	Q14028	1251 aa	Predicted RBP	13.68	□□□□□ -0.22
GCNT3-208	ENST00000560580	MORC1	Q86VD1	984 aa		13.67	□□□□□ -0.22
GCNT3-208	ENST00000560580	TTC21B	Q7Z4L5	1316 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms