RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 PXDNQ92626 1479 aa15.2■□□□□ 0.02
SNRPA1-212ENST00000560496 RGPD8O14715 1765 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-212ENST00000560496 LRPPRCP42704 1394 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-212ENST00000560496 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
SNRPA1-212ENST00000560496 CDK12Q9NYV4 1490 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-212ENST00000560496 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
SNRPA1-212ENST00000560496 ADGRB2O60241 1585 aa15.17■□□□□ 0.02
SNRPA1-212ENST00000560496 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-212ENST00000560496 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-212ENST00000560496 ADGRB1O14514 1584 aa15.16■□□□□ 0.02
SNRPA1-212ENST00000560496 PLEKHH1Q9ULM0 1364 aa15.16■□□□□ 0.02
SNRPA1-212ENST00000560496 ORAI2Q96SN7 254 aa15.16■□□□□ 0.02
SNRPA1-212ENST00000560496 USP32Q8NFA0 1604 aa15.16■□□□□ 0.02
SNRPA1-212ENST00000560496 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-212ENST00000560496 ABCC11Q96J66 1382 aa15.15■□□□□ 0.02
SNRPA1-212ENST00000560496 LRRC59Q96AG4 307 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-212ENST00000560496 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 DLC1Q96QB1 1528 aa15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 RGL3Q3MIN7 710 aa15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 ZNF772Q68DY9 489 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 RGS12O14924 1447 aa15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 AFF2P51816 1311 aa15.14■□□□□ 0.01
SNRPA1-212ENST00000560496 EP400Q96L91 3159 aa15.13■□□□□ 0.01
SNRPA1-212ENST00000560496 ARHGEF28Q8N1W1 1705 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-212ENST00000560496 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-212ENST00000560496 TMEM132EQ6IEE7 984 aa15.1■□□□□ 0.01
SNRPA1-212ENST00000560496 WAPLQ7Z5K2 1190 aa15.1■□□□□ 0.01
SNRPA1-212ENST00000560496 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-212ENST00000560496 STK26Q9P289 416 aa15.09■□□□□ 0.01
SNRPA1-212ENST00000560496 PLCH1Q4KWH8 1693 aa15.08■□□□□ 0
SNRPA1-212ENST00000560496 NPHP3Q7Z494 1330 aa15.08■□□□□ 0
SNRPA1-212ENST00000560496 CRYBG1Q9Y4K1 1723 aa15.07■□□□□ 0
SNRPA1-212ENST00000560496 C8orf37Q96NL8 207 aa15.07■□□□□ 0
SNRPA1-212ENST00000560496 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
SNRPA1-212ENST00000560496 ATRNO75882 1429 aa15.06■□□□□ 0
SNRPA1-212ENST00000560496 ALS2Q96Q42 1657 aa15.06■□□□□ 0
SNRPA1-212ENST00000560496 RXRBP28702 533 aa15.05■□□□□ -0
SNRPA1-212ENST00000560496 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
SNRPA1-212ENST00000560496 CFAP70Q5T0N1 1121 aa15.05■□□□□ -0
SNRPA1-212ENST00000560496 ITSN1Q15811 1721 aa15.04■□□□□ -0
SNRPA1-212ENST00000560496 KIAA1210Q9ULL0 1709 aa15.04■□□□□ -0
SNRPA1-212ENST00000560496 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
SNRPA1-212ENST00000560496 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
SNRPA1-212ENST00000560496 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
SNRPA1-212ENST00000560496 TNS3Q68CZ2 1445 aa15.03■□□□□ -0
SNRPA1-212ENST00000560496 DHX57Q6P158 1386 aaKnown RBP15.03■□□□□ -0
SNRPA1-212ENST00000560496 NUTM2FA1L443 756 aa15.03■□□□□ -0
SNRPA1-212ENST00000560496 ADAMTS2O95450 1211 aa15.03■□□□□ -0
SNRPA1-212ENST00000560496 UPF1Q92900 1129 aaKnown RBP eCLIP15.03■□□□□ -0
SNRPA1-212ENST00000560496 SIRT1Q96EB6 747 aa15.03■□□□□ -0
SNRPA1-212ENST00000560496 GLI3P10071 1580 aa15.02■□□□□ -0
SNRPA1-212ENST00000560496 BCL9LQ86UU0 1499 aa15.02■□□□□ -0
SNRPA1-212ENST00000560496 ANKARQ7Z5J8 1434 aa15.02■□□□□ -0
SNRPA1-212ENST00000560496 XPCQ01831 940 aaPredicted RBP15.02■□□□□ -0
SNRPA1-212ENST00000560496 NRAPQ86VF7 1730 aa15.02□□□□□ -0.01
SNRPA1-212ENST00000560496 FOXO3O43524 673 aa15.01□□□□□ -0.01
SNRPA1-212ENST00000560496 SLIT2O94813 1529 aa15.01□□□□□ -0.01
SNRPA1-212ENST00000560496 RBM6P78332 1123 aaKnown RBP15□□□□□ -0.01
SNRPA1-212ENST00000560496 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
SNRPA1-212ENST00000560496 SPATA31A3Q5VYP0 1347 aa14.99□□□□□ -0.01
SNRPA1-212ENST00000560496 FNBP4Q8N3X1 1017 aaPredicted RBP14.99□□□□□ -0.01
SNRPA1-212ENST00000560496 PRAM1Q96QH2 718 aa14.99□□□□□ -0.01
SNRPA1-212ENST00000560496 QTRT2Q9H974 415 aaKnown RBP14.99□□□□□ -0.01
SNRPA1-212ENST00000560496 NGLY1Q96IV0 654 aa14.98□□□□□ -0.01
SNRPA1-212ENST00000560496 ATP7BP35670 1465 aa14.97□□□□□ -0.01
SNRPA1-212ENST00000560496 PHRF1Q9P1Y6 1649 aaKnown RBP14.97□□□□□ -0.01
SNRPA1-212ENST00000560496 USP21Q9UK80 565 aa14.97□□□□□ -0.01
SNRPA1-212ENST00000560496 HRCP23327 699 aa14.96□□□□□ -0.01
SNRPA1-212ENST00000560496 SAFB2Q14151 953 aaKnown RBP eCLIP14.96□□□□□ -0.01
SNRPA1-212ENST00000560496 SBNO1A3KN83 1393 aa14.96□□□□□ -0.02
SNRPA1-212ENST00000560496 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-212ENST00000560496 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
SNRPA1-212ENST00000560496 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
SNRPA1-212ENST00000560496 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
SNRPA1-212ENST00000560496 COL14A1Q05707 1796 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-212ENST00000560496 SRCAPQ6ZRS2 3230 aa14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 DCAF11Q8TEB1 546 aa14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 TRAK1Q9UPV9 953 aa14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 EIF3AQ14152 1382 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 ATAD2Q6PL18 1390 aa14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 QRICH2Q9H0J4 1663 aa14.92□□□□□ -0.02
SNRPA1-212ENST00000560496 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-212ENST00000560496 POGKQ9P215 609 aa14.9□□□□□ -0.02
SNRPA1-212ENST00000560496 KDM2AQ9Y2K7 1162 aa14.9□□□□□ -0.02
SNRPA1-212ENST00000560496 TRPM1Q7Z4N2 1603 aa14.9□□□□□ -0.02
SNRPA1-212ENST00000560496 MINK1Q8N4C8 1332 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-212ENST00000560496 PMFBP1Q8TBY8 1022 aa14.88□□□□□ -0.03
SNRPA1-212ENST00000560496 STAC3Q96MF2 364 aa14.88□□□□□ -0.03
SNRPA1-212ENST00000560496 NRKQ7Z2Y5 1582 aa14.88□□□□□ -0.03
SNRPA1-212ENST00000560496 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
SNRPA1-212ENST00000560496 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-212ENST00000560496 PSME1Q06323 249 aa14.86□□□□□ -0.03
SNRPA1-212ENST00000560496 UNC5CLQ8IV45 518 aa14.86□□□□□ -0.03
SNRPA1-212ENST00000560496 CABLES1Q8TDN4 633 aa14.86□□□□□ -0.03
SNRPA1-212ENST00000560496 GJD4Q96KN9 370 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms