RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	TULP4	Q9NRJ4	1543 aa		7.65	□□□□□ -1.19
LRRC49-223	ENST00000560369	FAM69C	Q0P6D2	419 aa		7.65	□□□□□ -1.19
LRRC49-223	ENST00000560369	NBR1	Q14596	966 aa		7.65	□□□□□ -1.19
LRRC49-223	ENST00000560369	DUSP27	Q5VZP5	1158 aa		7.65	□□□□□ -1.19
LRRC49-223	ENST00000560369	CABP2	Q9NPB3	220 aa		7.65	□□□□□ -1.19
LRRC49-223	ENST00000560369	ZNF521	Q96K83	1311 aa		7.64	□□□□□ -1.19
LRRC49-223	ENST00000560369	DEK	P35659	375 aa	Known RBP	7.64	□□□□□ -1.19
LRRC49-223	ENST00000560369	CACNB1	Q02641	598 aa	Predicted RBP	7.64	□□□□□ -1.19
LRRC49-223	ENST00000560369	PDE3B	Q13370	1112 aa		7.64	□□□□□ -1.19
LRRC49-223	ENST00000560369	PAK3	O75914	559 aa	Predicted RBP	7.63	□□□□□ -1.19
LRRC49-223	ENST00000560369	RRP7A	Q9Y3A4	280 aa	Known RBP	7.63	□□□□□ -1.19
LRRC49-223	ENST00000560369	TMEM131L	A2VDJ0	1609 aa		7.63	□□□□□ -1.19
LRRC49-223	ENST00000560369	MLEC	Q14165	292 aa		7.63	□□□□□ -1.19
LRRC49-223	ENST00000560369	NEUROD2	Q15784	382 aa		7.62	□□□□□ -1.19
LRRC49-223	ENST00000560369	NPC1L1	Q9UHC9	1359 aa		7.62	□□□□□ -1.19
LRRC49-223	ENST00000560369	DIP2B	Q9P265	1576 aa		7.62	□□□□□ -1.19
LRRC49-223	ENST00000560369	CLTC	Q00610	1675 aa	Known RBP	7.61	□□□□□ -1.19
LRRC49-223	ENST00000560369	BCAR3	O75815	825 aa		7.61	□□□□□ -1.19
LRRC49-223	ENST00000560369	SLFN5	Q08AF3	891 aa		7.61	□□□□□ -1.19
LRRC49-223	ENST00000560369	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.61	□□□□□ -1.19
LRRC49-223	ENST00000560369	SBNO2	Q9Y2G9	1366 aa		7.61	□□□□□ -1.19
LRRC49-223	ENST00000560369	GOLGA2	Q08379	1002 aa		7.61	□□□□□ -1.19
LRRC49-223	ENST00000560369	MORC1	Q86VD1	984 aa		7.61	□□□□□ -1.19
LRRC49-223	ENST00000560369	FBLN1	P23142	703 aa		7.6	□□□□□ -1.19
LRRC49-223	ENST00000560369	INSR	P06213	1382 aa		7.6	□□□□□ -1.19
LRRC49-223	ENST00000560369	MTHFS	P49914	203 aa		7.6	□□□□□ -1.19
LRRC49-223	ENST00000560369	NOP58	Q9Y2X3	529 aa	Known RBP	7.6	□□□□□ -1.19
LRRC49-223	ENST00000560369	VGF	O15240	615 aa	Predicted RBP	7.59	□□□□□ -1.19
LRRC49-223	ENST00000560369	TRMT2A	Q8IZ69	625 aa	Known RBP	7.59	□□□□□ -1.19
LRRC49-223	ENST00000560369	RPGRIP1L	Q68CZ1	1315 aa		7.59	□□□□□ -1.19
LRRC49-223	ENST00000560369	PRAM1	Q96QH2	718 aa		7.59	□□□□□ -1.2
LRRC49-223	ENST00000560369	GGNBP2	Q9H3C7	697 aa		7.59	□□□□□ -1.2
LRRC49-223	ENST00000560369	TNN	Q9UQP3	1299 aa		7.59	□□□□□ -1.2
LRRC49-223	ENST00000560369	ARHGAP31	Q2M1Z3	1444 aa		7.58	□□□□□ -1.2
LRRC49-223	ENST00000560369	PTPRM	P28827	1452 aa		7.58	□□□□□ -1.2
LRRC49-223	ENST00000560369	KIF13A	Q9H1H9	1805 aa		7.58	□□□□□ -1.2
LRRC49-223	ENST00000560369		A0A1W2PP64	1363 aa		7.58	□□□□□ -1.2
LRRC49-223	ENST00000560369	WAPL	Q7Z5K2	1190 aa		7.58	□□□□□ -1.2
LRRC49-223	ENST00000560369	SRPK2	P78362	688 aa	Known RBP	7.57	□□□□□ -1.2
LRRC49-223	ENST00000560369	WWC1	Q8IX03	1113 aa		7.57	□□□□□ -1.2
LRRC49-223	ENST00000560369	ALK	Q9UM73	1620 aa		7.57	□□□□□ -1.2
LRRC49-223	ENST00000560369	POLR3A	O14802	1390 aa	Predicted RBP	7.57	□□□□□ -1.2
LRRC49-223	ENST00000560369	EVC2	Q86UK5	1308 aa		7.57	□□□□□ -1.2
LRRC49-223	ENST00000560369	NPM2	Q86SE8	214 aa	Known RBP	7.57	□□□□□ -1.2
LRRC49-223	ENST00000560369	CD163L1	Q9NR16	1453 aa		7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	TCP11L2	Q8N4U5	519 aa		7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	USP32	Q8NFA0	1604 aa		7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	YTHDC2	Q9H6S0	1430 aa	Known RBP	7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	SETD1A	O15047	1707 aa	Known RBP	7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	NCKAP5L	Q9HCH0	1330 aa		7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	BCL2L13	Q9BXK5	485 aa		7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	SLC52A1	Q9NWF4	448 aa		7.56	□□□□□ -1.2
LRRC49-223	ENST00000560369	ANKRD36B	Q8N2N9	1353 aa		7.55	□□□□□ -1.2
LRRC49-223	ENST00000560369	CGNL1	Q0VF96	1302 aa		7.55	□□□□□ -1.2
LRRC49-223	ENST00000560369	PDE4A	P27815	886 aa		7.55	□□□□□ -1.2
LRRC49-223	ENST00000560369	PANK1	Q8TE04	598 aa		7.55	□□□□□ -1.2
LRRC49-223	ENST00000560369	STAG3	Q9UJ98	1225 aa		7.55	□□□□□ -1.2
LRRC49-223	ENST00000560369	NKTR	P30414	1462 aa	Known RBP	7.55	□□□□□ -1.2
LRRC49-223	ENST00000560369	IQSEC2	Q5JU85	1478 aa		7.55	□□□□□ -1.2
LRRC49-223	ENST00000560369	KDM2B	Q8NHM5	1336 aa		7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	MAP2	P11137	1827 aa	Known RBP	7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	FYB1	O15117	783 aa		7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	CDK19	Q9BWU1	502 aa		7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	POGK	Q9P215	609 aa		7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	CABP1	Q9NZU7	370 aa		7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	ZRANB1	Q9UGI0	708 aa		7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	ZFYVE9	O95405	1425 aa		7.54	□□□□□ -1.2
LRRC49-223	ENST00000560369	NRXN3	Q9Y4C0	1643 aa		7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	A2ML1	A8K2U0	1454 aa		7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	ANKRD26	Q9UPS8	1709 aa		7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	SLC24A1	O60721	1099 aa		7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	IGHD	P01880	384 aa		7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	RUNDC1	Q96C34	613 aa		7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	BACH2	Q9BYV9	841 aa		7.53	□□□□□ -1.2
LRRC49-223	ENST00000560369	NLRP1	Q9C000	1473 aa		7.52	□□□□□ -1.2
LRRC49-223	ENST00000560369	KIF20B	Q96Q89	1820 aa		7.52	□□□□□ -1.2
LRRC49-223	ENST00000560369		E9PSI1	815 aa		7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	U2SURP	O15042	1029 aa	Known RBP	7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	RLBP1	P12271	317 aa		7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	FRAT1	Q92837	279 aa	Predicted RBP	7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	TSR2	Q969E8	191 aa	Known RBP	7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	COG6	Q9Y2V7	657 aa		7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	ABCC11	Q96J66	1382 aa		7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	ANP32A	P39687	249 aa	Known RBP	7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	IPO9	Q96P70	1041 aa	Known RBP	7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	MET	P08581	1390 aa		7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	COL3A1	P02461	1466 aa	Predicted RBP	7.52	□□□□□ -1.21
LRRC49-223	ENST00000560369	ARHGEF40	Q8TER5	1519 aa		7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	TCERG1	O14776	1098 aa	Known RBP	7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	TXNDC2	Q86VQ3	553 aa		7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	RIMS2	Q9UQ26	1411 aa		7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	SPATA31D1	Q6ZQQ2	1576 aa		7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	RGS3	P49796	1198 aa		7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	CLUAP1	Q96AJ1	413 aa		7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	ZBTB47	Q9UFB7	747 aa	Predicted RBP	7.51	□□□□□ -1.21
LRRC49-223	ENST00000560369	PPM1G	O15355	546 aa	Predicted RBP	7.5	□□□□□ -1.21
LRRC49-223	ENST00000560369	PLEKHF1	Q96S99	279 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms