RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 MEX3CQ5U5Q3 659 aaKnown RBP28.75■■■□□ 2.19
KNSTRN-210ENST00000560321 SIRT1Q96EB6 747 aa28.74■■■□□ 2.19
KNSTRN-210ENST00000560321 DCAF11Q8TEB1 546 aa28.72■■■□□ 2.19
KNSTRN-210ENST00000560321 CFAP70Q5T0N1 1121 aa28.71■■■□□ 2.19
KNSTRN-210ENST00000560321 WAPLQ7Z5K2 1190 aa28.69■■■□□ 2.18
KNSTRN-210ENST00000560321 KDM2AQ9Y2K7 1162 aa28.69■■■□□ 2.18
KNSTRN-210ENST00000560321 ESCO1Q5FWF5 840 aa28.66■■■□□ 2.18
KNSTRN-210ENST00000560321 ORAI2Q96SN7 254 aa28.64■■■□□ 2.18
KNSTRN-210ENST00000560321 POGKQ9P215 609 aa28.64■■■□□ 2.18
KNSTRN-210ENST00000560321 NPHP3Q7Z494 1330 aa28.64■■■□□ 2.17
KNSTRN-210ENST00000560321 RGS17Q9UGC6 210 aaPredicted RBP28.63■■■□□ 2.17
KNSTRN-210ENST00000560321 ZNF772Q68DY9 489 aaPredicted RBP28.62■■■□□ 2.17
KNSTRN-210ENST00000560321 DLC1Q96QB1 1528 aa28.62■■■□□ 2.17
KNSTRN-210ENST00000560321 FMN2Q9NZ56 1722 aa28.61■■■□□ 2.17
KNSTRN-210ENST00000560321 NUTM2BA6NNL0 878 aaPredicted RBP28.61■■■□□ 2.17
KNSTRN-210ENST00000560321 NUTM2EB1AL46 878 aaPredicted RBP28.61■■■□□ 2.17
KNSTRN-210ENST00000560321 NUTM2AQ8IVF1 878 aaPredicted RBP28.61■■■□□ 2.17
KNSTRN-210ENST00000560321 DDX17Q92841 729 aaKnown RBP28.59■■■□□ 2.17
KNSTRN-210ENST00000560321 SOS2Q07890 1332 aaPredicted RBP28.59■■■□□ 2.17
KNSTRN-210ENST00000560321 PLEKHH1Q9ULM0 1364 aa28.59■■■□□ 2.17
KNSTRN-210ENST00000560321 KIF1AQ12756 1690 aa28.58■■■□□ 2.17
KNSTRN-210ENST00000560321 PRAM1Q96QH2 718 aa28.58■■■□□ 2.17
KNSTRN-210ENST00000560321 LRP6O75581 1613 aa28.58■■■□□ 2.17
KNSTRN-210ENST00000560321 PNPLA6Q8IY17 1366 aa28.56■■■□□ 2.16
KNSTRN-210ENST00000560321 ADGRB1O14514 1584 aa28.54■■■□□ 2.16
KNSTRN-210ENST00000560321 NUTM2FA1L443 756 aa28.54■■■□□ 2.16
KNSTRN-210ENST00000560321 TRAK1Q9UPV9 953 aa28.54■■■□□ 2.16
KNSTRN-210ENST00000560321 SAFB2Q14151 953 aaKnown RBP eCLIP28.53■■■□□ 2.16
KNSTRN-210ENST00000560321 POTEAQ6S8J7 498 aa28.53■■■□□ 2.16
KNSTRN-210ENST00000560321 KIAA1210Q9ULL0 1709 aa28.52■■■□□ 2.16
KNSTRN-210ENST00000560321 EIF3AQ14152 1382 aaKnown RBP28.52■■■□□ 2.16
KNSTRN-210ENST00000560321 RGPD8O14715 1765 aaPredicted RBP28.52■■■□□ 2.16
KNSTRN-210ENST00000560321 FOXO3O43524 673 aa28.51■■■□□ 2.15
KNSTRN-210ENST00000560321 ADGRB2O60241 1585 aa28.48■■■□□ 2.15
KNSTRN-210ENST00000560321 PSME1Q06323 249 aa28.46■■■□□ 2.15
KNSTRN-210ENST00000560321 COL22A1Q8NFW1 1626 aaPredicted RBP28.46■■■□□ 2.15
KNSTRN-210ENST00000560321 PXDNQ92626 1479 aa28.46■■■□□ 2.15
KNSTRN-210ENST00000560321 ANKARQ7Z5J8 1434 aa28.45■■■□□ 2.15
KNSTRN-210ENST00000560321 C8orf37Q96NL8 207 aa28.45■■■□□ 2.14
KNSTRN-210ENST00000560321 PHF8Q9UPP1 1060 aa28.45■■■□□ 2.14
KNSTRN-210ENST00000560321 AFF2P51816 1311 aa28.43■■■□□ 2.14
KNSTRN-210ENST00000560321 ARHGEF28Q8N1W1 1705 aaKnown RBP28.43■■■□□ 2.14
KNSTRN-210ENST00000560321 NGLY1Q96IV0 654 aa28.43■■■□□ 2.14
KNSTRN-210ENST00000560321 ADAMTS2O95450 1211 aa28.42■■■□□ 2.14
KNSTRN-210ENST00000560321 MINK1Q8N4C8 1332 aaPredicted RBP28.41■■■□□ 2.14
KNSTRN-210ENST00000560321 RXRBP28702 533 aa28.4■■■□□ 2.14
KNSTRN-210ENST00000560321 XPCQ01831 940 aaPredicted RBP28.4■■■□□ 2.14
KNSTRN-210ENST00000560321 KRT28Q7Z3Y7 464 aa28.4■■■□□ 2.14
KNSTRN-210ENST00000560321 HIRIP3Q9BW71 556 aaPredicted RBP28.38■■■□□ 2.13
KNSTRN-210ENST00000560321 MARF1Q9Y4F3 1742 aaKnown RBP28.38■■■□□ 2.13
KNSTRN-210ENST00000560321 ITSN1Q15811 1721 aa28.37■■■□□ 2.13
KNSTRN-210ENST00000560321 WASLO00401 505 aaPredicted RBP28.36■■■□□ 2.13
KNSTRN-210ENST00000560321 TULP4Q9NRJ4 1543 aa28.36■■■□□ 2.13
KNSTRN-210ENST00000560321 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
KNSTRN-210ENST00000560321 SPATA31A3Q5VYP0 1347 aa28.35■■■□□ 2.13
KNSTRN-210ENST00000560321 HAP1P54257 671 aaPredicted RBP28.34■■■□□ 2.13
KNSTRN-210ENST00000560321 GPRASP1Q5JY77 1395 aa28.34■■■□□ 2.13
KNSTRN-210ENST00000560321 NEUROD1Q13562 356 aa28.33■■■□□ 2.13
KNSTRN-210ENST00000560321 USP32Q8NFA0 1604 aa28.32■■■□□ 2.12
KNSTRN-210ENST00000560321 QTRT2Q9H974 415 aaKnown RBP28.32■■■□□ 2.12
KNSTRN-210ENST00000560321 SBNO1A3KN83 1393 aa28.32■■■□□ 2.12
KNSTRN-210ENST00000560321 ARHGEF10O15013 1369 aa28.32■■■□□ 2.12
KNSTRN-210ENST00000560321 L3MBTL2Q969R5 705 aa28.31■■■□□ 2.12
KNSTRN-210ENST00000560321 TNS3Q68CZ2 1445 aa28.31■■■□□ 2.12
KNSTRN-210ENST00000560321 CDK12Q9NYV4 1490 aaPredicted RBP28.31■■■□□ 2.12
KNSTRN-210ENST00000560321 PMFBP1Q8TBY8 1022 aa28.3■■■□□ 2.12
KNSTRN-210ENST00000560321 USP21Q9UK80 565 aa28.3■■■□□ 2.12
KNSTRN-210ENST00000560321 RBM6P78332 1123 aaKnown RBP28.29■■■□□ 2.12
KNSTRN-210ENST00000560321 LMOD2Q6P5Q4 547 aa28.29■■■□□ 2.12
KNSTRN-210ENST00000560321 NGDNQ8NEJ9 315 aaKnown RBP28.28■■■□□ 2.12
KNSTRN-210ENST00000560321 SIN3AQ96ST3 1273 aa28.28■■■□□ 2.12
KNSTRN-210ENST00000560321 TRPC5Q9UL62 973 aaPredicted RBP28.28■■■□□ 2.12
KNSTRN-210ENST00000560321 NBPF1Q3BBV0 1214 aa28.26■■■□□ 2.11
KNSTRN-210ENST00000560321 FNBP4Q8N3X1 1017 aaPredicted RBP28.26■■■□□ 2.11
KNSTRN-210ENST00000560321 CENPJQ9HC77 1338 aaPredicted RBP28.23■■■□□ 2.11
KNSTRN-210ENST00000560321 NUDT16Q96DE0 195 aaKnown RBP28.23■■■□□ 2.11
KNSTRN-210ENST00000560321 CDK19Q9BWU1 502 aa28.23■■■□□ 2.11
KNSTRN-210ENST00000560321 TRPM1Q7Z4N2 1603 aa28.21■■■□□ 2.11
KNSTRN-210ENST00000560321 PRR36Q9H6K5 1346 aa28.2■■■□□ 2.11
KNSTRN-210ENST00000560321 QRICH2Q9H0J4 1663 aa28.19■■■□□ 2.1
KNSTRN-210ENST00000560321 CCDC61Q9Y6R9 512 aa28.19■■■□□ 2.1
KNSTRN-210ENST00000560321 TRPM3Q9HCF6 1732 aaPredicted RBP28.18■■■□□ 2.1
KNSTRN-210ENST00000560321 ROCK2O75116 1388 aaKnown RBP28.18■■■□□ 2.1
KNSTRN-210ENST00000560321 ATP7BP35670 1465 aa28.18■■■□□ 2.1
KNSTRN-210ENST00000560321 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.18■■■□□ 2.1
KNSTRN-210ENST00000560321 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
KNSTRN-210ENST00000560321 PAK3O75914 559 aaPredicted RBP28.17■■■□□ 2.1
KNSTRN-210ENST00000560321 SRPK2P78362 688 aaKnown RBP28.17■■■□□ 2.1
KNSTRN-210ENST00000560321 ALS2Q96Q42 1657 aa28.15■■■□□ 2.1
KNSTRN-210ENST00000560321 ABCA3Q99758 1704 aa28.15■■■□□ 2.1
KNSTRN-210ENST00000560321 TOPAZ1Q8N9V7 1692 aa28.13■■■□□ 2.09
KNSTRN-210ENST00000560321 ATRNO75882 1429 aa28.13■■■□□ 2.09
KNSTRN-210ENST00000560321 NWD2Q9ULI1 1742 aa28.12■■■□□ 2.09
KNSTRN-210ENST00000560321 PLEKHG5O94827 1062 aa28.12■■■□□ 2.09
KNSTRN-210ENST00000560321 UNC5CLQ8IV45 518 aa28.12■■■□□ 2.09
KNSTRN-210ENST00000560321 BCL9LQ86UU0 1499 aa28.11■■■□□ 2.09
KNSTRN-210ENST00000560321 CABLES1Q8TDN4 633 aa28.11■■■□□ 2.09
KNSTRN-210ENST00000560321 EVC2Q86UK5 1308 aa28.1■■■□□ 2.09
KNSTRN-210ENST00000560321 RGS12O14924 1447 aa28.09■■■□□ 2.09
KNSTRN-210ENST00000560321 PLEKHG3A1L390 1219 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms