RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 SAFB2Q14151 953 aaKnown RBP eCLIP19.08■□□□□ 0.64
HMBOX1-213ENST00000560269 DISP3Q9P2K9 1392 aa19.07■□□□□ 0.64
HMBOX1-213ENST00000560269 ZNF335Q9H4Z2 1342 aaPredicted RBP19.07■□□□□ 0.64
HMBOX1-213ENST00000560269 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
HMBOX1-213ENST00000560269 C11orf95C9JLR9 678 aaPredicted RBP19.07■□□□□ 0.64
HMBOX1-213ENST00000560269 MINK1Q8N4C8 1332 aaPredicted RBP19.06■□□□□ 0.64
HMBOX1-213ENST00000560269 NALCNQ8IZF0 1738 aa19.05■□□□□ 0.64
HMBOX1-213ENST00000560269 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
HMBOX1-213ENST00000560269 CCDC7Q96M83 1385 aa19.05■□□□□ 0.64
HMBOX1-213ENST00000560269 EVC2Q86UK5 1308 aa19.04■□□□□ 0.64
HMBOX1-213ENST00000560269 PROSER2Q86WR7 435 aaPredicted RBP19.04■□□□□ 0.64
HMBOX1-213ENST00000560269 KIF7Q2M1P5 1343 aa19.03■□□□□ 0.64
HMBOX1-213ENST00000560269 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
HMBOX1-213ENST00000560269 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
HMBOX1-213ENST00000560269 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
HMBOX1-213ENST00000560269 PUS7Q96PZ0 661 aaKnown RBP19.03■□□□□ 0.64
HMBOX1-213ENST00000560269 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.64
HMBOX1-213ENST00000560269 LRRC7Q96NW7 1537 aa19.02■□□□□ 0.64
HMBOX1-213ENST00000560269 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
HMBOX1-213ENST00000560269 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
HMBOX1-213ENST00000560269 WASLO00401 505 aaPredicted RBP19■□□□□ 0.63
HMBOX1-213ENST00000560269 TMEM94Q12767 1356 aa19■□□□□ 0.63
HMBOX1-213ENST00000560269 CDK19Q9BWU1 502 aa18.99■□□□□ 0.63
HMBOX1-213ENST00000560269 FMN2Q9NZ56 1722 aa18.98■□□□□ 0.63
HMBOX1-213ENST00000560269 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
HMBOX1-213ENST00000560269 MYOM1P52179 1685 aa18.96■□□□□ 0.63
HMBOX1-213ENST00000560269 DCCP43146 1447 aa18.95■□□□□ 0.62
HMBOX1-213ENST00000560269 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
HMBOX1-213ENST00000560269 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
HMBOX1-213ENST00000560269 ATAD2Q6PL18 1390 aa18.94■□□□□ 0.62
HMBOX1-213ENST00000560269 USP32Q8NFA0 1604 aa18.94■□□□□ 0.62
HMBOX1-213ENST00000560269 C14orf37Q86TY3 774 aa18.94■□□□□ 0.62
HMBOX1-213ENST00000560269 C19orf44Q9H6X5 657 aa18.94■□□□□ 0.62
HMBOX1-213ENST00000560269 ATP7BP35670 1465 aa18.94■□□□□ 0.62
HMBOX1-213ENST00000560269 TOPAZ1Q8N9V7 1692 aa18.93■□□□□ 0.62
HMBOX1-213ENST00000560269 ANKARQ7Z5J8 1434 aa18.92■□□□□ 0.62
HMBOX1-213ENST00000560269 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
HMBOX1-213ENST00000560269 MSH6P52701 1360 aa18.92■□□□□ 0.62
HMBOX1-213ENST00000560269 NINLQ9Y2I6 1382 aa18.92■□□□□ 0.62
HMBOX1-213ENST00000560269 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
HMBOX1-213ENST00000560269 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
HMBOX1-213ENST00000560269 NUDT16Q96DE0 195 aaKnown RBP18.9■□□□□ 0.62
HMBOX1-213ENST00000560269 RGPD8O14715 1765 aaPredicted RBP18.9■□□□□ 0.62
HMBOX1-213ENST00000560269 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
HMBOX1-213ENST00000560269 CCDC61Q9Y6R9 512 aa18.88■□□□□ 0.61
HMBOX1-213ENST00000560269 MST1RQ04912 1400 aa18.86■□□□□ 0.61
HMBOX1-213ENST00000560269 PPIP5K1Q6PFW1 1433 aa18.86■□□□□ 0.61
HMBOX1-213ENST00000560269 ATF3P18847 181 aa18.86■□□□□ 0.61
HMBOX1-213ENST00000560269 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
HMBOX1-213ENST00000560269 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
HMBOX1-213ENST00000560269 PLEKHG3A1L390 1219 aa18.84■□□□□ 0.61
HMBOX1-213ENST00000560269 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
HMBOX1-213ENST00000560269 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
HMBOX1-213ENST00000560269 CABP1Q9NZU7 370 aa18.84■□□□□ 0.61
HMBOX1-213ENST00000560269 C1orf167Q5SNV9 1468 aa18.84■□□□□ 0.61
HMBOX1-213ENST00000560269 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
HMBOX1-213ENST00000560269 AKAP12Q02952 1782 aa18.83■□□□□ 0.6
HMBOX1-213ENST00000560269 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.6
HMBOX1-213ENST00000560269 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
HMBOX1-213ENST00000560269 PANK3Q9H999 370 aa18.82■□□□□ 0.6
HMBOX1-213ENST00000560269 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
HMBOX1-213ENST00000560269 KIF1AQ12756 1690 aa18.8■□□□□ 0.6
HMBOX1-213ENST00000560269 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
HMBOX1-213ENST00000560269 MON2Q7Z3U7 1717 aa18.8■□□□□ 0.6
HMBOX1-213ENST00000560269 A0A1W2PP64 1363 aa18.8■□□□□ 0.6
HMBOX1-213ENST00000560269 POLR3AO14802 1390 aaPredicted RBP18.8■□□□□ 0.6
HMBOX1-213ENST00000560269 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
HMBOX1-213ENST00000560269 HDGFL2Q7Z4V5 671 aaPredicted RBP18.78■□□□□ 0.6
HMBOX1-213ENST00000560269 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
HMBOX1-213ENST00000560269 ACEP12821 1306 aa18.77■□□□□ 0.6
HMBOX1-213ENST00000560269 ESCO1Q5FWF5 840 aa18.77■□□□□ 0.6
HMBOX1-213ENST00000560269 ORAI2Q96SN7 254 aa18.77■□□□□ 0.6
HMBOX1-213ENST00000560269 CARD14Q9BXL6 1004 aa18.77■□□□□ 0.6
HMBOX1-213ENST00000560269 SLAIN2Q9P270 581 aa18.77■□□□□ 0.6
HMBOX1-213ENST00000560269 PMFBP1Q8TBY8 1022 aa18.76■□□□□ 0.59
HMBOX1-213ENST00000560269 ZNF692Q9BU19 519 aaPredicted RBP18.76■□□□□ 0.59
HMBOX1-213ENST00000560269 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
HMBOX1-213ENST00000560269 NRKQ7Z2Y5 1582 aa18.75■□□□□ 0.59
HMBOX1-213ENST00000560269 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
HMBOX1-213ENST00000560269 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
HMBOX1-213ENST00000560269 USP6P35125 1406 aa18.74■□□□□ 0.59
HMBOX1-213ENST00000560269 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
HMBOX1-213ENST00000560269 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
HMBOX1-213ENST00000560269 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
HMBOX1-213ENST00000560269 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
HMBOX1-213ENST00000560269 SSH2Q76I76 1423 aa18.72■□□□□ 0.59
HMBOX1-213ENST00000560269 BRD4O60885 1362 aaPredicted RBP18.71■□□□□ 0.59
HMBOX1-213ENST00000560269 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
HMBOX1-213ENST00000560269 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
HMBOX1-213ENST00000560269 AMER1Q5JTC6 1135 aaPredicted RBP18.69■□□□□ 0.58
HMBOX1-213ENST00000560269 KIF20BQ96Q89 1820 aa18.69■□□□□ 0.58
HMBOX1-213ENST00000560269 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
HMBOX1-213ENST00000560269 NHSL1Q5SYE7 1610 aa18.68■□□□□ 0.58
HMBOX1-213ENST00000560269 FOXO3O43524 673 aa18.68■□□□□ 0.58
HMBOX1-213ENST00000560269 TOM1O60784 492 aa18.68■□□□□ 0.58
HMBOX1-213ENST00000560269 ROBO1Q9Y6N7 1651 aa18.68■□□□□ 0.58
HMBOX1-213ENST00000560269 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
HMBOX1-213ENST00000560269 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
HMBOX1-213ENST00000560269 TTC21BQ7Z4L5 1316 aa18.67■□□□□ 0.58
HMBOX1-213ENST00000560269 NSD2O96028 1365 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms