RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ORAI2Q96SN7 254 aa16.97■□□□□ 0.31
RABGGTA-216ENST00000560243 JCADQ9P266 1359 aa16.96■□□□□ 0.31
RABGGTA-216ENST00000560243 TRIM26Q12899 539 aaPredicted RBP16.95■□□□□ 0.3
RABGGTA-216ENST00000560243 SAFB2Q14151 953 aaKnown RBP eCLIP16.95■□□□□ 0.3
RABGGTA-216ENST00000560243 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
RABGGTA-216ENST00000560243 NUTM2FA1L443 756 aa16.94■□□□□ 0.3
RABGGTA-216ENST00000560243 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
RABGGTA-216ENST00000560243 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
RABGGTA-216ENST00000560243 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
RABGGTA-216ENST00000560243 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-216ENST00000560243 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
RABGGTA-216ENST00000560243 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
RABGGTA-216ENST00000560243 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
RABGGTA-216ENST00000560243 RGS17Q9UGC6 210 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-216ENST00000560243 FMN2Q9NZ56 1722 aa16.92■□□□□ 0.3
RABGGTA-216ENST00000560243 LRP6O75581 1613 aa16.91■□□□□ 0.3
RABGGTA-216ENST00000560243 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
RABGGTA-216ENST00000560243 ESCO1Q5FWF5 840 aa16.9■□□□□ 0.3
RABGGTA-216ENST00000560243 POGKQ9P215 609 aa16.9■□□□□ 0.3
RABGGTA-216ENST00000560243 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.29
RABGGTA-216ENST00000560243 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-216ENST00000560243 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
RABGGTA-216ENST00000560243 LRRC59Q96AG4 307 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-216ENST00000560243 SOS2Q07890 1332 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-216ENST00000560243 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
RABGGTA-216ENST00000560243 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-216ENST00000560243 KIAA1210Q9ULL0 1709 aa16.87■□□□□ 0.29
RABGGTA-216ENST00000560243 FOXO3O43524 673 aa16.86■□□□□ 0.29
RABGGTA-216ENST00000560243 XPCQ01831 940 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-216ENST00000560243 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-216ENST00000560243 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-216ENST00000560243 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
RABGGTA-216ENST00000560243 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-216ENST00000560243 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-216ENST00000560243 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-216ENST00000560243 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
RABGGTA-216ENST00000560243 PXDNQ92626 1479 aa16.84■□□□□ 0.29
RABGGTA-216ENST00000560243 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
RABGGTA-216ENST00000560243 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
RABGGTA-216ENST00000560243 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
RABGGTA-216ENST00000560243 SOCS7O14512 581 aa16.81■□□□□ 0.28
RABGGTA-216ENST00000560243 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-216ENST00000560243 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
RABGGTA-216ENST00000560243 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
RABGGTA-216ENST00000560243 PHF8Q9UPP1 1060 aa16.79■□□□□ 0.28
RABGGTA-216ENST00000560243 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
RABGGTA-216ENST00000560243 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
RABGGTA-216ENST00000560243 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-216ENST00000560243 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
RABGGTA-216ENST00000560243 COL22A1Q8NFW1 1626 aaPredicted RBP16.77■□□□□ 0.27
RABGGTA-216ENST00000560243 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
RABGGTA-216ENST00000560243 ADAMTS2O95450 1211 aa16.76■□□□□ 0.27
RABGGTA-216ENST00000560243 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
RABGGTA-216ENST00000560243 KRT28Q7Z3Y7 464 aa16.76■□□□□ 0.27
RABGGTA-216ENST00000560243 AFF2P51816 1311 aa16.73■□□□□ 0.27
RABGGTA-216ENST00000560243 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
RABGGTA-216ENST00000560243 C8orf37Q96NL8 207 aa16.73■□□□□ 0.27
RABGGTA-216ENST00000560243 CDK19Q9BWU1 502 aa16.73■□□□□ 0.27
RABGGTA-216ENST00000560243 ATP7BP35670 1465 aa16.73■□□□□ 0.27
RABGGTA-216ENST00000560243 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-216ENST00000560243 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
RABGGTA-216ENST00000560243 CENPJQ9HC77 1338 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-216ENST00000560243 PSME1Q06323 249 aa16.71■□□□□ 0.27
RABGGTA-216ENST00000560243 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-216ENST00000560243 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-216ENST00000560243 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
RABGGTA-216ENST00000560243 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-216ENST00000560243 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
RABGGTA-216ENST00000560243 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
RABGGTA-216ENST00000560243 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
RABGGTA-216ENST00000560243 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
RABGGTA-216ENST00000560243 TRPM3Q9HCF6 1732 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-216ENST00000560243 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
RABGGTA-216ENST00000560243 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
RABGGTA-216ENST00000560243 CABLES1Q8TDN4 633 aa16.68■□□□□ 0.26
RABGGTA-216ENST00000560243 TOPAZ1Q8N9V7 1692 aa16.68■□□□□ 0.26
RABGGTA-216ENST00000560243 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-216ENST00000560243 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
RABGGTA-216ENST00000560243 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-216ENST00000560243 GPRASP1Q5JY77 1395 aa16.66■□□□□ 0.26
RABGGTA-216ENST00000560243 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
RABGGTA-216ENST00000560243 ALS2Q96Q42 1657 aa16.65■□□□□ 0.26
RABGGTA-216ENST00000560243 ABCA3Q99758 1704 aa16.65■□□□□ 0.26
RABGGTA-216ENST00000560243 SRPK2P78362 688 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-216ENST00000560243 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
RABGGTA-216ENST00000560243 RALGAPBQ86X10 1494 aa16.64■□□□□ 0.25
RABGGTA-216ENST00000560243 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-216ENST00000560243 QTRT2Q9H974 415 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-216ENST00000560243 USP21Q9UK80 565 aa16.63■□□□□ 0.25
RABGGTA-216ENST00000560243 ACEP12821 1306 aa16.63■□□□□ 0.25
RABGGTA-216ENST00000560243 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
RABGGTA-216ENST00000560243 RXRBP28702 533 aa16.62■□□□□ 0.25
RABGGTA-216ENST00000560243 CARD11Q9BXL7 1154 aa16.62■□□□□ 0.25
RABGGTA-216ENST00000560243 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-216ENST00000560243 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
RABGGTA-216ENST00000560243 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-216ENST00000560243 PPIP5K1Q6PFW1 1433 aa16.61■□□□□ 0.25
RABGGTA-216ENST00000560243 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
RABGGTA-216ENST00000560243 HAP1P54257 671 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-216ENST00000560243 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms