RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 YTHDC2Q9H6S0 1430 aaKnown RBP17.34■□□□□ 0.37
AC104041.1-202ENST00000560097 FMN2Q9NZ56 1722 aa17.34■□□□□ 0.37
AC104041.1-202ENST00000560097 CFAP70Q5T0N1 1121 aa17.33■□□□□ 0.36
AC104041.1-202ENST00000560097 C14orf93Q9H972 538 aaKnown RBP17.32■□□□□ 0.36
AC104041.1-202ENST00000560097 RGPD8O14715 1765 aaPredicted RBP17.32■□□□□ 0.36
AC104041.1-202ENST00000560097 HRCP23327 699 aa17.31■□□□□ 0.36
AC104041.1-202ENST00000560097 STK26Q9P289 416 aa17.31■□□□□ 0.36
AC104041.1-202ENST00000560097 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
AC104041.1-202ENST00000560097 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
AC104041.1-202ENST00000560097 PXDNQ92626 1479 aa17.29■□□□□ 0.36
AC104041.1-202ENST00000560097 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
AC104041.1-202ENST00000560097 SOS2Q07890 1332 aaPredicted RBP17.26■□□□□ 0.35
AC104041.1-202ENST00000560097 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
AC104041.1-202ENST00000560097 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
AC104041.1-202ENST00000560097 SPATA31A6Q5VVP1 1343 aa17.24■□□□□ 0.35
AC104041.1-202ENST00000560097 ADGRB2O60241 1585 aa17.24■□□□□ 0.35
AC104041.1-202ENST00000560097 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
AC104041.1-202ENST00000560097 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
AC104041.1-202ENST00000560097 DCAF11Q8TEB1 546 aa17.2■□□□□ 0.34
AC104041.1-202ENST00000560097 SIRT1Q96EB6 747 aa17.2■□□□□ 0.34
AC104041.1-202ENST00000560097 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
AC104041.1-202ENST00000560097 NUTM2BA6NNL0 878 aaPredicted RBP17.19■□□□□ 0.34
AC104041.1-202ENST00000560097 NUTM2EB1AL46 878 aaPredicted RBP17.19■□□□□ 0.34
AC104041.1-202ENST00000560097 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
AC104041.1-202ENST00000560097 NUTM2AQ8IVF1 878 aaPredicted RBP17.19■□□□□ 0.34
AC104041.1-202ENST00000560097 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
AC104041.1-202ENST00000560097 KIF1AQ12756 1690 aa17.18■□□□□ 0.34
AC104041.1-202ENST00000560097 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
AC104041.1-202ENST00000560097 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
AC104041.1-202ENST00000560097 ABCA3Q99758 1704 aa17.16■□□□□ 0.34
AC104041.1-202ENST00000560097 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
AC104041.1-202ENST00000560097 KIAA1210Q9ULL0 1709 aa17.16■□□□□ 0.34
AC104041.1-202ENST00000560097 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
AC104041.1-202ENST00000560097 LRRC59Q96AG4 307 aaKnown RBP17.16■□□□□ 0.34
AC104041.1-202ENST00000560097 MARF1Q9Y4F3 1742 aaKnown RBP17.16■□□□□ 0.34
AC104041.1-202ENST00000560097 FOXO3O43524 673 aa17.15■□□□□ 0.34
AC104041.1-202ENST00000560097 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
AC104041.1-202ENST00000560097 AFF2P51816 1311 aa17.14■□□□□ 0.33
AC104041.1-202ENST00000560097 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
AC104041.1-202ENST00000560097 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
AC104041.1-202ENST00000560097 CRYBG1Q9Y4K1 1723 aa17.11■□□□□ 0.33
AC104041.1-202ENST00000560097 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
AC104041.1-202ENST00000560097 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
AC104041.1-202ENST00000560097 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
AC104041.1-202ENST00000560097 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
AC104041.1-202ENST00000560097 NPHP3Q7Z494 1330 aa17.1■□□□□ 0.33
AC104041.1-202ENST00000560097 ATP7BP35670 1465 aa17.1■□□□□ 0.33
AC104041.1-202ENST00000560097 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
AC104041.1-202ENST00000560097 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
AC104041.1-202ENST00000560097 RGS12O14924 1447 aa17.09■□□□□ 0.33
AC104041.1-202ENST00000560097 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
AC104041.1-202ENST00000560097 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.32
AC104041.1-202ENST00000560097 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
AC104041.1-202ENST00000560097 ADAMTS2O95450 1211 aa17.08■□□□□ 0.32
AC104041.1-202ENST00000560097 C8orf37Q96NL8 207 aa17.08■□□□□ 0.32
AC104041.1-202ENST00000560097 BCL9LQ86UU0 1499 aa17.07■□□□□ 0.32
AC104041.1-202ENST00000560097 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
AC104041.1-202ENST00000560097 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
AC104041.1-202ENST00000560097 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
AC104041.1-202ENST00000560097 CDK12Q9NYV4 1490 aaPredicted RBP17.05■□□□□ 0.32
AC104041.1-202ENST00000560097 ATRNO75882 1429 aa17.04■□□□□ 0.32
AC104041.1-202ENST00000560097 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
AC104041.1-202ENST00000560097 KRT28Q7Z3Y7 464 aa17.04■□□□□ 0.32
AC104041.1-202ENST00000560097 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
AC104041.1-202ENST00000560097 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
AC104041.1-202ENST00000560097 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
AC104041.1-202ENST00000560097 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
AC104041.1-202ENST00000560097 POGKQ9P215 609 aa17.03■□□□□ 0.32
AC104041.1-202ENST00000560097 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
AC104041.1-202ENST00000560097 GLI3P10071 1580 aa17.02■□□□□ 0.32
AC104041.1-202ENST00000560097 SLIT2O94813 1529 aa17.02■□□□□ 0.32
AC104041.1-202ENST00000560097 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
AC104041.1-202ENST00000560097 WASLO00401 505 aaPredicted RBP17.02■□□□□ 0.32
AC104041.1-202ENST00000560097 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.32
AC104041.1-202ENST00000560097 SBNO1A3KN83 1393 aa17.02■□□□□ 0.31
AC104041.1-202ENST00000560097 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
AC104041.1-202ENST00000560097 NBPF8Q3BBV2 869 aa17■□□□□ 0.31
AC104041.1-202ENST00000560097 NRAPQ86VF7 1730 aa17■□□□□ 0.31
AC104041.1-202ENST00000560097 EP400Q96L91 3159 aa16.99■□□□□ 0.31
AC104041.1-202ENST00000560097 QTRT2Q9H974 415 aaKnown RBP16.99■□□□□ 0.31
AC104041.1-202ENST00000560097 RXRBP28702 533 aa16.98■□□□□ 0.31
AC104041.1-202ENST00000560097 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
AC104041.1-202ENST00000560097 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
AC104041.1-202ENST00000560097 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.31
AC104041.1-202ENST00000560097 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
AC104041.1-202ENST00000560097 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
AC104041.1-202ENST00000560097 USP21Q9UK80 565 aa16.95■□□□□ 0.3
AC104041.1-202ENST00000560097 BRWD3Q6RI45 1802 aa16.95■□□□□ 0.3
AC104041.1-202ENST00000560097 POLR3AO14802 1390 aaPredicted RBP16.94■□□□□ 0.3
AC104041.1-202ENST00000560097 NWD2Q9ULI1 1742 aa16.94■□□□□ 0.3
AC104041.1-202ENST00000560097 RBM6P78332 1123 aaKnown RBP16.94■□□□□ 0.3
AC104041.1-202ENST00000560097 NEUROD1Q13562 356 aa16.94■□□□□ 0.3
AC104041.1-202ENST00000560097 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
AC104041.1-202ENST00000560097 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
AC104041.1-202ENST00000560097 GPRASP1Q5JY77 1395 aa16.92■□□□□ 0.3
AC104041.1-202ENST00000560097 ARHGEF10O15013 1369 aa16.9■□□□□ 0.3
AC104041.1-202ENST00000560097 EIF3AQ14152 1382 aaKnown RBP16.9■□□□□ 0.3
AC104041.1-202ENST00000560097 NRKQ7Z2Y5 1582 aa16.9■□□□□ 0.3
AC104041.1-202ENST00000560097 FAM83GA6ND36 823 aa16.9■□□□□ 0.3
AC104041.1-202ENST00000560097 PSME1Q06323 249 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms