RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SHANK2Q9UPX8 1470 aa7.87□□□□□ -1.15
SPG11-220ENST00000559933 ABCA6Q8N139 1617 aa7.86□□□□□ -1.15
SPG11-220ENST00000559933 MMRN1Q13201 1228 aa7.86□□□□□ -1.15
SPG11-220ENST00000559933 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
SPG11-220ENST00000559933 ATP7AQ04656 1500 aa7.86□□□□□ -1.15
SPG11-220ENST00000559933 KIDINS220Q9ULH0 1771 aa7.86□□□□□ -1.15
SPG11-220ENST00000559933 HECW2Q9P2P5 1572 aa7.85□□□□□ -1.15
SPG11-220ENST00000559933 ADGRL2O95490 1459 aa7.85□□□□□ -1.15
SPG11-220ENST00000559933 ZNF518AQ6AHZ1 1483 aa7.85□□□□□ -1.15
SPG11-220ENST00000559933 NAIPQ13075 1403 aa7.85□□□□□ -1.15
SPG11-220ENST00000559933 YEATS2Q9ULM3 1422 aa7.85□□□□□ -1.15
SPG11-220ENST00000559933 PLXNC1O60486 1568 aa7.84□□□□□ -1.15
SPG11-220ENST00000559933 SIGLEC1Q9BZZ2 1709 aa7.84□□□□□ -1.15
SPG11-220ENST00000559933 HFM1A2PYH4 1435 aa7.84□□□□□ -1.15
SPG11-220ENST00000559933 DIP2CQ9Y2E4 1556 aa7.84□□□□□ -1.15
SPG11-220ENST00000559933 RAB3GAP2Q9H2M9 1393 aa7.84□□□□□ -1.16
SPG11-220ENST00000559933 KIF15Q9NS87 1388 aa7.84□□□□□ -1.16
SPG11-220ENST00000559933 SPAG9O60271 1321 aaKnown RBP7.83□□□□□ -1.16
SPG11-220ENST00000559933 KDM4FA0A1W2PPD8 638 aa7.83□□□□□ -1.16
SPG11-220ENST00000559933 LSM11P83369 360 aaKnown RBP eCLIP7.83□□□□□ -1.16
SPG11-220ENST00000559933 WDR70Q9NW82 654 aa7.83□□□□□ -1.16
SPG11-220ENST00000559933 MYT1LQ9UL68 1186 aa7.83□□□□□ -1.16
SPG11-220ENST00000559933 NCOA1Q15788 1441 aa7.83□□□□□ -1.16
SPG11-220ENST00000559933 ZMYM4Q5VZL5 1548 aa7.83□□□□□ -1.16
SPG11-220ENST00000559933 ARHGAP33O14559 1287 aa7.82□□□□□ -1.16
SPG11-220ENST00000559933 EVI5O60447 810 aa7.82□□□□□ -1.16
SPG11-220ENST00000559933 PTGER2P43116 358 aa7.82□□□□□ -1.16
SPG11-220ENST00000559933 ZNF454Q8N9F8 522 aa7.82□□□□□ -1.16
SPG11-220ENST00000559933 ROCK1Q13464 1354 aa7.82□□□□□ -1.16
SPG11-220ENST00000559933 ANKRD30AQ9BXX3 1397 aa7.82□□□□□ -1.16
SPG11-220ENST00000559933 SETD5Q9C0A6 1442 aa7.81□□□□□ -1.16
SPG11-220ENST00000559933 TSPY4P0CV99 314 aa7.81□□□□□ -1.16
SPG11-220ENST00000559933 TSPY10P0CW01 314 aa7.81□□□□□ -1.16
SPG11-220ENST00000559933 AXIN2Q9Y2T1 843 aa7.81□□□□□ -1.16
SPG11-220ENST00000559933 ARHGEF40Q8TER5 1519 aa7.81□□□□□ -1.16
SPG11-220ENST00000559933 MLH3Q9UHC1 1453 aa7.8□□□□□ -1.16
SPG11-220ENST00000559933 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
SPG11-220ENST00000559933 ANKRD50Q9ULJ7 1429 aa7.79□□□□□ -1.16
SPG11-220ENST00000559933 DUOX2Q9NRD8 1548 aa7.79□□□□□ -1.16
SPG11-220ENST00000559933 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
SPG11-220ENST00000559933 A2MP01023 1474 aa7.79□□□□□ -1.16
SPG11-220ENST00000559933 LMTK3Q96Q04 1460 aa7.79□□□□□ -1.16
SPG11-220ENST00000559933 MROH1Q8NDA8 1641 aa7.78□□□□□ -1.16
SPG11-220ENST00000559933 STAC3Q96MF2 364 aa7.78□□□□□ -1.16
SPG11-220ENST00000559933 KCNK17Q96T54 332 aa7.78□□□□□ -1.16
SPG11-220ENST00000559933 RSPH4AQ5TD94 716 aa7.77□□□□□ -1.17
SPG11-220ENST00000559933 RNF166Q96A37 237 aaPredicted RBP7.77□□□□□ -1.17
SPG11-220ENST00000559933 ANO8Q9HCE9 1232 aaPredicted RBP7.77□□□□□ -1.17
SPG11-220ENST00000559933 ERBINQ96RT1 1412 aa7.77□□□□□ -1.17
SPG11-220ENST00000559933 UNC13BO14795 1591 aa7.76□□□□□ -1.17
SPG11-220ENST00000559933 PZPP20742 1482 aa7.76□□□□□ -1.17
SPG11-220ENST00000559933 FOSBP53539 338 aa7.76□□□□□ -1.17
SPG11-220ENST00000559933 CAMK2BQ13554 666 aa7.76□□□□□ -1.17
SPG11-220ENST00000559933 ATP10AO60312 1499 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 DEPDC5O75140 1603 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 DHX57Q6P158 1386 aaKnown RBP7.75□□□□□ -1.17
SPG11-220ENST00000559933 DHX29Q7Z478 1369 aaKnown RBP7.75□□□□□ -1.17
SPG11-220ENST00000559933 EIF2AK4Q9P2K8 1649 aaKnown RBP7.75□□□□□ -1.17
SPG11-220ENST00000559933 DPYSL4O14531 572 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 PTPREP23469 700 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 PSEN2P49810 448 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 TRIM52Q96A61 297 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 CEP152O94986 1710 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 MAGI2Q86UL8 1455 aa7.75□□□□□ -1.17
SPG11-220ENST00000559933 RNF17Q9BXT8 1623 aaKnown RBP7.74□□□□□ -1.17
SPG11-220ENST00000559933 KIF3BO15066 747 aa7.74□□□□□ -1.17
SPG11-220ENST00000559933 E2F4Q16254 413 aa7.74□□□□□ -1.17
SPG11-220ENST00000559933 ADGRD1Q6QNK2 874 aa7.74□□□□□ -1.17
SPG11-220ENST00000559933 POTEEQ6S8J3 1075 aa7.74□□□□□ -1.17
SPG11-220ENST00000559933 ZDHHC16Q969W1 377 aa7.74□□□□□ -1.17
SPG11-220ENST00000559933 BCL2L12Q9HB09 334 aa7.74□□□□□ -1.17
SPG11-220ENST00000559933 PRDM15P57071 1507 aaPredicted RBP7.73□□□□□ -1.17
SPG11-220ENST00000559933 KDM5DQ9BY66 1539 aa7.73□□□□□ -1.17
SPG11-220ENST00000559933 FAM135AQ9P2D6 1515 aa7.73□□□□□ -1.17
SPG11-220ENST00000559933 BCORL1Q5H9F3 1711 aa7.73□□□□□ -1.17
SPG11-220ENST00000559933 TK2O00142 265 aa7.73□□□□□ -1.17
SPG11-220ENST00000559933 MLECQ14165 292 aa7.73□□□□□ -1.17
SPG11-220ENST00000559933 ILDR2Q71H61 639 aa7.73□□□□□ -1.17
SPG11-220ENST00000559933 IQGAP3Q86VI3 1631 aa7.73□□□□□ -1.17
SPG11-220ENST00000559933 REREQ9P2R6 1566 aa7.72□□□□□ -1.17
SPG11-220ENST00000559933 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
SPG11-220ENST00000559933 NUP155O75694 1391 aa7.71□□□□□ -1.17
SPG11-220ENST00000559933 VWDEQ8N2E2 1590 aa7.71□□□□□ -1.17
SPG11-220ENST00000559933 DMRTA1Q5VZB9 504 aa7.71□□□□□ -1.18
SPG11-220ENST00000559933 TYW1BQ6NUM6 668 aa7.71□□□□□ -1.18
SPG11-220ENST00000559933 GGT6Q6P531 493 aa7.71□□□□□ -1.18
SPG11-220ENST00000559933 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
SPG11-220ENST00000559933 CLTCQ00610 1675 aaKnown RBP7.7□□□□□ -1.18
SPG11-220ENST00000559933 ABCC3O15438 1527 aa7.7□□□□□ -1.18
SPG11-220ENST00000559933 AGLP35573 1532 aa7.7□□□□□ -1.18
SPG11-220ENST00000559933 SPDYE16A6NNV3 312 aaPredicted RBP7.7□□□□□ -1.18
SPG11-220ENST00000559933 PHF14O94880 888 aa7.7□□□□□ -1.18
SPG11-220ENST00000559933 ARID4BQ4LE39 1312 aaPredicted RBP7.7□□□□□ -1.18
SPG11-220ENST00000559933 E9PCH4 1651 aa7.7□□□□□ -1.18
SPG11-220ENST00000559933 MPHOSPH9Q99550 1183 aa7.69□□□□□ -1.18
SPG11-220ENST00000559933 EPAS1Q99814 870 aa7.69□□□□□ -1.18
SPG11-220ENST00000559933 ADAM33Q9BZ11 813 aa7.69□□□□□ -1.18
SPG11-220ENST00000559933 CAMSAP1Q5T5Y3 1602 aa7.69□□□□□ -1.18
SPG11-220ENST00000559933 TET3O43151 1660 aa7.69□□□□□ -1.18
SPG11-220ENST00000559933 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms