RNA–Protein interactions for RNA: ENST00000559779.1

CERNA1-201, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 3 BASIC

Gene CERNA1, Length 908 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-201ENST00000559779 NUTM2AQ8IVF1 878 aaPredicted RBP23.84■■□□□ 1.41
CERNA1-201ENST00000559779 LRP6O75581 1613 aa23.84■■□□□ 1.41
CERNA1-201ENST00000559779 TECPR2O15040 1411 aa23.84■■□□□ 1.41
CERNA1-201ENST00000559779 YTHDC2Q9H6S0 1430 aaKnown RBP23.84■■□□□ 1.41
CERNA1-201ENST00000559779 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
CERNA1-201ENST00000559779 POTEAQ6S8J7 498 aa23.82■■□□□ 1.4
CERNA1-201ENST00000559779 KNDC1Q76NI1 1749 aa23.81■■□□□ 1.4
CERNA1-201ENST00000559779 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
CERNA1-201ENST00000559779 PLEKHH1Q9ULM0 1364 aa23.8■■□□□ 1.4
CERNA1-201ENST00000559779 CDC42BPGQ6DT37 1551 aa23.8■■□□□ 1.4
CERNA1-201ENST00000559779 KDM2AQ9Y2K7 1162 aa23.8■■□□□ 1.4
CERNA1-201ENST00000559779 LAMC1P11047 1609 aa23.8■■□□□ 1.4
CERNA1-201ENST00000559779 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
CERNA1-201ENST00000559779 DCAF11Q8TEB1 546 aa23.79■■□□□ 1.4
CERNA1-201ENST00000559779 NUTM2FA1L443 756 aa23.78■■□□□ 1.4
CERNA1-201ENST00000559779 SIRT1Q96EB6 747 aa23.75■■□□□ 1.39
CERNA1-201ENST00000559779 PNPLA6Q8IY17 1366 aa23.74■■□□□ 1.39
CERNA1-201ENST00000559779 ZNF772Q68DY9 489 aaPredicted RBP23.73■■□□□ 1.39
CERNA1-201ENST00000559779 SOS2Q07890 1332 aaPredicted RBP23.73■■□□□ 1.39
CERNA1-201ENST00000559779 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
CERNA1-201ENST00000559779 PRAM1Q96QH2 718 aa23.72■■□□□ 1.39
CERNA1-201ENST00000559779 NPHP3Q7Z494 1330 aa23.71■■□□□ 1.39
CERNA1-201ENST00000559779 POGKQ9P215 609 aa23.71■■□□□ 1.39
CERNA1-201ENST00000559779 FOXO3O43524 673 aa23.7■■□□□ 1.38
CERNA1-201ENST00000559779 STAC3Q96MF2 364 aa23.7■■□□□ 1.38
CERNA1-201ENST00000559779 FMN2Q9NZ56 1722 aa23.68■■□□□ 1.38
CERNA1-201ENST00000559779 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
CERNA1-201ENST00000559779 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
CERNA1-201ENST00000559779 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
CERNA1-201ENST00000559779 ADAMTS2O95450 1211 aa23.67■■□□□ 1.38
CERNA1-201ENST00000559779 ADGRB1O14514 1584 aa23.66■■□□□ 1.38
CERNA1-201ENST00000559779 AFF2P51816 1311 aa23.65■■□□□ 1.38
CERNA1-201ENST00000559779 DLC1Q96QB1 1528 aa23.65■■□□□ 1.38
CERNA1-201ENST00000559779 PXDNQ92626 1479 aa23.63■■□□□ 1.37
CERNA1-201ENST00000559779 NGLY1Q96IV0 654 aa23.62■■□□□ 1.37
CERNA1-201ENST00000559779 KIF1AQ12756 1690 aa23.6■■□□□ 1.37
CERNA1-201ENST00000559779 RXRBP28702 533 aa23.6■■□□□ 1.37
CERNA1-201ENST00000559779 HIRIP3Q9BW71 556 aaPredicted RBP23.6■■□□□ 1.37
CERNA1-201ENST00000559779 RGPD8O14715 1765 aaPredicted RBP23.6■■□□□ 1.37
CERNA1-201ENST00000559779 PHF8Q9UPP1 1060 aa23.59■■□□□ 1.37
CERNA1-201ENST00000559779 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
CERNA1-201ENST00000559779 COL22A1Q8NFW1 1626 aaPredicted RBP23.58■■□□□ 1.36
CERNA1-201ENST00000559779 KRT28Q7Z3Y7 464 aa23.57■■□□□ 1.36
CERNA1-201ENST00000559779 QTRT2Q9H974 415 aaKnown RBP23.55■■□□□ 1.36
CERNA1-201ENST00000559779 ADGRB2O60241 1585 aa23.54■■□□□ 1.36
CERNA1-201ENST00000559779 PSME1Q06323 249 aa23.54■■□□□ 1.36
CERNA1-201ENST00000559779 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
CERNA1-201ENST00000559779 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
CERNA1-201ENST00000559779 ANKARQ7Z5J8 1434 aa23.52■■□□□ 1.36
CERNA1-201ENST00000559779 USP21Q9UK80 565 aa23.52■■□□□ 1.36
CERNA1-201ENST00000559779 USP32Q8NFA0 1604 aa23.51■■□□□ 1.35
CERNA1-201ENST00000559779 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
CERNA1-201ENST00000559779 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
CERNA1-201ENST00000559779 LMOD2Q6P5Q4 547 aa23.5■■□□□ 1.35
CERNA1-201ENST00000559779 ARHGEF28Q8N1W1 1705 aaKnown RBP23.5■■□□□ 1.35
CERNA1-201ENST00000559779 PLEKHG5O94827 1062 aa23.49■■□□□ 1.35
CERNA1-201ENST00000559779 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
CERNA1-201ENST00000559779 KIAA1210Q9ULL0 1709 aa23.48■■□□□ 1.35
CERNA1-201ENST00000559779 HAP1P54257 671 aaPredicted RBP23.48■■□□□ 1.35
CERNA1-201ENST00000559779 SIN3AQ96ST3 1273 aa23.48■■□□□ 1.35
CERNA1-201ENST00000559779 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
CERNA1-201ENST00000559779 NBPF1Q3BBV0 1214 aa23.47■■□□□ 1.35
CERNA1-201ENST00000559779 FNBP4Q8N3X1 1017 aaPredicted RBP23.47■■□□□ 1.35
CERNA1-201ENST00000559779 TNS3Q68CZ2 1445 aa23.47■■□□□ 1.35
CERNA1-201ENST00000559779 TULP4Q9NRJ4 1543 aa23.47■■□□□ 1.35
CERNA1-201ENST00000559779 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
CERNA1-201ENST00000559779 CDK12Q9NYV4 1490 aaPredicted RBP23.46■■□□□ 1.35
CERNA1-201ENST00000559779 TRPC5Q9UL62 973 aaPredicted RBP23.46■■□□□ 1.35
CERNA1-201ENST00000559779 MARF1Q9Y4F3 1742 aaKnown RBP23.45■■□□□ 1.34
CERNA1-201ENST00000559779 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.34
CERNA1-201ENST00000559779 SBNO1A3KN83 1393 aa23.44■■□□□ 1.34
CERNA1-201ENST00000559779 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
CERNA1-201ENST00000559779 CABLES1Q8TDN4 633 aa23.43■■□□□ 1.34
CERNA1-201ENST00000559779 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
CERNA1-201ENST00000559779 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
CERNA1-201ENST00000559779 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
CERNA1-201ENST00000559779 RGS12O14924 1447 aa23.41■■□□□ 1.34
CERNA1-201ENST00000559779 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
CERNA1-201ENST00000559779 BCL9LQ86UU0 1499 aa23.38■■□□□ 1.33
CERNA1-201ENST00000559779 ATRNO75882 1429 aa23.38■■□□□ 1.33
CERNA1-201ENST00000559779 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
CERNA1-201ENST00000559779 UPF1Q92900 1129 aaKnown RBP eCLIP23.37■■□□□ 1.33
CERNA1-201ENST00000559779 ITSN1Q15811 1721 aa23.36■■□□□ 1.33
CERNA1-201ENST00000559779 ATP7BP35670 1465 aa23.36■■□□□ 1.33
CERNA1-201ENST00000559779 CENPJQ9HC77 1338 aaPredicted RBP23.35■■□□□ 1.33
CERNA1-201ENST00000559779 TRPM3Q9HCF6 1732 aaPredicted RBP23.35■■□□□ 1.33
CERNA1-201ENST00000559779 UNC5CLQ8IV45 518 aa23.34■■□□□ 1.33
CERNA1-201ENST00000559779 SLIT2O94813 1529 aa23.33■■□□□ 1.32
CERNA1-201ENST00000559779 SRPK2P78362 688 aaKnown RBP23.32■■□□□ 1.32
CERNA1-201ENST00000559779 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
CERNA1-201ENST00000559779 GJD4Q96KN9 370 aaPredicted RBP23.32■■□□□ 1.32
CERNA1-201ENST00000559779 CCDC61Q9Y6R9 512 aa23.32■■□□□ 1.32
CERNA1-201ENST00000559779 ABCA3Q99758 1704 aa23.32■■□□□ 1.32
CERNA1-201ENST00000559779 ALS2Q96Q42 1657 aa23.3■■□□□ 1.32
CERNA1-201ENST00000559779 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.3■■□□□ 1.32
CERNA1-201ENST00000559779 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
CERNA1-201ENST00000559779 ROCK2O75116 1388 aaKnown RBP23.29■■□□□ 1.32
CERNA1-201ENST00000559779 QRICH2Q9H0J4 1663 aa23.28■■□□□ 1.32
CERNA1-201ENST00000559779 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
CERNA1-201ENST00000559779 ACEP12821 1306 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms