RNA–Protein interactions for RNA: ENST00000559685.5

LRRC49-219, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 758 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-219ENST00000559685 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
LRRC49-219ENST00000559685 TERTO14746 1132 aaKnown RBP9.69□□□□□ -0.86
LRRC49-219ENST00000559685 DNAJB2P25686 324 aa9.69□□□□□ -0.86
LRRC49-219ENST00000559685 RPIAP49247 311 aa9.69□□□□□ -0.86
LRRC49-219ENST00000559685 FAM161AQ3B820 660 aa9.68□□□□□ -0.86
LRRC49-219ENST00000559685 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
LRRC49-219ENST00000559685 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
LRRC49-219ENST00000559685 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
LRRC49-219ENST00000559685 ADGRG1Q9Y653 693 aa9.68□□□□□ -0.86
LRRC49-219ENST00000559685 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
LRRC49-219ENST00000559685 FAM117AQ9C073 453 aa9.67□□□□□ -0.86
LRRC49-219ENST00000559685 CFHP08603 1231 aa9.66□□□□□ -0.86
LRRC49-219ENST00000559685 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
LRRC49-219ENST00000559685 METTL3Q86U44 580 aaKnown RBP9.66□□□□□ -0.86
LRRC49-219ENST00000559685 TMEM134Q9H6X4 195 aa9.66□□□□□ -0.86
LRRC49-219ENST00000559685 DAXXQ9UER7 740 aaPredicted RBP9.66□□□□□ -0.86
LRRC49-219ENST00000559685 SCUBE3Q8IX30 993 aa9.65□□□□□ -0.86
LRRC49-219ENST00000559685 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
LRRC49-219ENST00000559685 OATP04181 439 aa9.64□□□□□ -0.87
LRRC49-219ENST00000559685 CLCN1P35523 988 aa9.64□□□□□ -0.87
LRRC49-219ENST00000559685 MDM2Q00987 491 aaPredicted RBP9.64□□□□□ -0.87
LRRC49-219ENST00000559685 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
LRRC49-219ENST00000559685 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
LRRC49-219ENST00000559685 DDRGK1Q96HY6 314 aa9.63□□□□□ -0.87
LRRC49-219ENST00000559685 GPCPD1Q9NPB8 672 aa9.63□□□□□ -0.87
LRRC49-219ENST00000559685 MS4A1P11836 297 aa9.62□□□□□ -0.87
LRRC49-219ENST00000559685 SNRPBP14678 240 aaKnown RBP9.62□□□□□ -0.87
LRRC49-219ENST00000559685 RBM46Q8TBY0 533 aaKnown RBP9.62□□□□□ -0.87
LRRC49-219ENST00000559685 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
LRRC49-219ENST00000559685 SPSB2Q99619 263 aa9.62□□□□□ -0.87
LRRC49-219ENST00000559685 SENP2Q9HC62 589 aa9.62□□□□□ -0.87
LRRC49-219ENST00000559685 ATP13A2Q9NQ11 1180 aa9.62□□□□□ -0.87
LRRC49-219ENST00000559685 TRIM47Q96LD4 638 aa9.61□□□□□ -0.87
LRRC49-219ENST00000559685 TTC24A2A3L6 582 aaPredicted RBP9.6□□□□□ -0.87
LRRC49-219ENST00000559685 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
LRRC49-219ENST00000559685 SLC10A3P09131 477 aa9.58□□□□□ -0.88
LRRC49-219ENST00000559685 RCCD1A6NED2 376 aa9.57□□□□□ -0.88
LRRC49-219ENST00000559685 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
LRRC49-219ENST00000559685 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
LRRC49-219ENST00000559685 FCF1Q9Y324 198 aaKnown RBP9.56□□□□□ -0.88
LRRC49-219ENST00000559685 ZSCAN1Q8NBB4 408 aa9.55□□□□□ -0.88
LRRC49-219ENST00000559685 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
LRRC49-219ENST00000559685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.54□□□□□ -0.88
LRRC49-219ENST00000559685 SMPD1P17405 629 aa9.54□□□□□ -0.88
LRRC49-219ENST00000559685 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
LRRC49-219ENST00000559685 SUZ12Q15022 739 aaKnown RBP9.54□□□□□ -0.88
LRRC49-219ENST00000559685 PUS10Q3MIT2 529 aaKnown RBP9.54□□□□□ -0.88
LRRC49-219ENST00000559685 SNIP1Q8TAD8 396 aaKnown RBP9.54□□□□□ -0.88
LRRC49-219ENST00000559685 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
LRRC49-219ENST00000559685 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
LRRC49-219ENST00000559685 RSPH4AQ5TD94 716 aa9.51□□□□□ -0.89
LRRC49-219ENST00000559685 ERICH6Q7L0X2 663 aa9.51□□□□□ -0.89
LRRC49-219ENST00000559685 BEGAINQ9BUH8 593 aa9.51□□□□□ -0.89
LRRC49-219ENST00000559685 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
LRRC49-219ENST00000559685 WNT7AO00755 349 aa9.5□□□□□ -0.89
LRRC49-219ENST00000559685 GMPRP36959 345 aa9.49□□□□□ -0.89
LRRC49-219ENST00000559685 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
LRRC49-219ENST00000559685 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
LRRC49-219ENST00000559685 SH3D19Q5HYK7 790 aa9.48□□□□□ -0.89
LRRC49-219ENST00000559685 IRF7Q92985 503 aa9.47□□□□□ -0.89
LRRC49-219ENST00000559685 THAP11Q96EK4 314 aa9.47□□□□□ -0.89
LRRC49-219ENST00000559685 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.9
LRRC49-219ENST00000559685 FAM160A2Q8N612 972 aaPredicted RBP9.46□□□□□ -0.9
LRRC49-219ENST00000559685 J3QL48 77 aa9.45□□□□□ -0.9
LRRC49-219ENST00000559685 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
LRRC49-219ENST00000559685 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
LRRC49-219ENST00000559685 CD46P15529 392 aa9.44□□□□□ -0.9
LRRC49-219ENST00000559685 MORN1Q5T089 497 aa9.44□□□□□ -0.9
LRRC49-219ENST00000559685 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
LRRC49-219ENST00000559685 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
LRRC49-219ENST00000559685 DDX11L8A8MPP1 907 aa9.43□□□□□ -0.9
LRRC49-219ENST00000559685 HPS1Q92902 700 aa9.43□□□□□ -0.9
LRRC49-219ENST00000559685 MRGPRX2Q96LB1 330 aa9.43□□□□□ -0.9
LRRC49-219ENST00000559685 SKIV2LQ15477 1246 aaKnown RBP9.42□□□□□ -0.9
LRRC49-219ENST00000559685 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
LRRC49-219ENST00000559685 TBC1D2Q9BYX2 928 aa9.42□□□□□ -0.9
LRRC49-219ENST00000559685 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
LRRC49-219ENST00000559685 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
LRRC49-219ENST00000559685 TRIM32Q13049 653 aa9.39□□□□□ -0.91
LRRC49-219ENST00000559685 POLR3EQ9NVU0 708 aa9.39□□□□□ -0.91
LRRC49-219ENST00000559685 CLK2P49760 499 aaKnown RBP9.38□□□□□ -0.91
LRRC49-219ENST00000559685 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
LRRC49-219ENST00000559685 RDH13Q8NBN7 331 aa9.38□□□□□ -0.91
LRRC49-219ENST00000559685 PROCA1Q8NCQ7 364 aaPredicted RBP9.38□□□□□ -0.91
LRRC49-219ENST00000559685 SPIRE2Q8WWL2 714 aa9.38□□□□□ -0.91
LRRC49-219ENST00000559685 PRDM9Q9NQV7 894 aa9.38□□□□□ -0.91
LRRC49-219ENST00000559685 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
LRRC49-219ENST00000559685 FUT2Q10981 343 aa9.37□□□□□ -0.91
LRRC49-219ENST00000559685 BRICD5Q6PL45 260 aa9.37□□□□□ -0.91
LRRC49-219ENST00000559685 H3BM21 787 aa9.36□□□□□ -0.91
LRRC49-219ENST00000559685 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
LRRC49-219ENST00000559685 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
LRRC49-219ENST00000559685 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
LRRC49-219ENST00000559685 LIMD1Q9UGP4 676 aa9.35□□□□□ -0.91
LRRC49-219ENST00000559685 VEGFBP49765 207 aa9.34□□□□□ -0.91
LRRC49-219ENST00000559685 ERBB4Q15303 1308 aa9.32□□□□□ -0.92
LRRC49-219ENST00000559685 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
LRRC49-219ENST00000559685 SPTLC1O15269 473 aa9.32□□□□□ -0.92
LRRC49-219ENST00000559685 KDM4AO75164 1064 aa9.32□□□□□ -0.92
LRRC49-219ENST00000559685 GCGRP47871 477 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms