RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-208	ENST00000559604	MYOM2	P54296	1465 aa		28.19	■■■□□ 2.1
KNSTRN-208	ENST00000559604	WAPL	Q7Z5K2	1190 aa		28.18	■■■□□ 2.1
KNSTRN-208	ENST00000559604	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.17	■■■□□ 2.1
KNSTRN-208	ENST00000559604	NUTM2E	B1AL46	878 aa	Predicted RBP	28.17	■■■□□ 2.1
KNSTRN-208	ENST00000559604	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.17	■■■□□ 2.1
KNSTRN-208	ENST00000559604	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.17	■■■□□ 2.1
KNSTRN-208	ENST00000559604	PNPLA6	Q8IY17	1366 aa		28.16	■■■□□ 2.1
KNSTRN-208	ENST00000559604	C14orf93	Q9H972	538 aa	Known RBP	28.16	■■■□□ 2.1
KNSTRN-208	ENST00000559604	PLEKHH1	Q9ULM0	1364 aa		28.15	■■■□□ 2.1
KNSTRN-208	ENST00000559604	HRC	P23327	699 aa		28.14	■■■□□ 2.1
KNSTRN-208	ENST00000559604	SOS2	Q07890	1332 aa	Predicted RBP	28.14	■■■□□ 2.09
KNSTRN-208	ENST00000559604	CFAP70	Q5T0N1	1121 aa		28.12	■■■□□ 2.09
KNSTRN-208	ENST00000559604	ZNF772	Q68DY9	489 aa	Predicted RBP	28.11	■■■□□ 2.09
KNSTRN-208	ENST00000559604	ESCO1	Q5FWF5	840 aa		28.08	■■■□□ 2.09
KNSTRN-208	ENST00000559604	SIRT1	Q96EB6	747 aa		28.08	■■■□□ 2.09
KNSTRN-208	ENST00000559604	FMN2	Q9NZ56	1722 aa		28.07	■■■□□ 2.08
KNSTRN-208	ENST00000559604	DHX57	Q6P158	1386 aa	Known RBP	28.07	■■■□□ 2.08
KNSTRN-208	ENST00000559604	NUTM2F	A1L443	756 aa		28.05	■■■□□ 2.08
KNSTRN-208	ENST00000559604	AFF2	P51816	1311 aa		28.04	■■■□□ 2.08
KNSTRN-208	ENST00000559604	PXDN	Q92626	1479 aa		28.03	■■■□□ 2.08
KNSTRN-208	ENST00000559604	NPHP3	Q7Z494	1330 aa		28.02	■■■□□ 2.08
KNSTRN-208	ENST00000559604	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.01	■■■□□ 2.07
KNSTRN-208	ENST00000559604	ADGRB1	O14514	1584 aa		28.01	■■■□□ 2.07
KNSTRN-208	ENST00000559604	FOXO3	O43524	673 aa		28	■■■□□ 2.07
KNSTRN-208	ENST00000559604	C8orf37	Q96NL8	207 aa		28	■■■□□ 2.07
KNSTRN-208	ENST00000559604	DLC1	Q96QB1	1528 aa		27.99	■■■□□ 2.07
KNSTRN-208	ENST00000559604	DCAF11	Q8TEB1	546 aa		27.99	■■■□□ 2.07
KNSTRN-208	ENST00000559604	RGPD8	O14715	1765 aa	Predicted RBP	27.99	■■■□□ 2.07
KNSTRN-208	ENST00000559604	PRAM1	Q96QH2	718 aa		27.98	■■■□□ 2.07
KNSTRN-208	ENST00000559604	KDM2A	Q9Y2K7	1162 aa		27.98	■■■□□ 2.07
KNSTRN-208	ENST00000559604	ADAMTS2	O95450	1211 aa		27.97	■■■□□ 2.07
KNSTRN-208	ENST00000559604	XPC	Q01831	940 aa	Predicted RBP	27.97	■■■□□ 2.07
KNSTRN-208	ENST00000559604	RXRB	P28702	533 aa		27.96	■■■□□ 2.07
KNSTRN-208	ENST00000559604	KIF1A	Q12756	1690 aa		27.96	■■■□□ 2.07
KNSTRN-208	ENST00000559604	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.95	■■■□□ 2.06
KNSTRN-208	ENST00000559604	STAC3	Q96MF2	364 aa		27.93	■■■□□ 2.06
KNSTRN-208	ENST00000559604	NGLY1	Q96IV0	654 aa		27.92	■■■□□ 2.06
KNSTRN-208	ENST00000559604	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.91	■■■□□ 2.06
KNSTRN-208	ENST00000559604	POGK	Q9P215	609 aa		27.91	■■■□□ 2.06
KNSTRN-208	ENST00000559604	TRAK1	Q9UPV9	953 aa		27.9	■■■□□ 2.06
KNSTRN-208	ENST00000559604	ADGRB2	O60241	1585 aa		27.9	■■■□□ 2.06
KNSTRN-208	ENST00000559604	QTRT2	Q9H974	415 aa	Known RBP	27.89	■■■□□ 2.06
KNSTRN-208	ENST00000559604	USP32	Q8NFA0	1604 aa		27.88	■■■□□ 2.05
KNSTRN-208	ENST00000559604	MARF1	Q9Y4F3	1742 aa	Known RBP	27.87	■■■□□ 2.05
KNSTRN-208	ENST00000559604	PHF8	Q9UPP1	1060 aa		27.87	■■■□□ 2.05
KNSTRN-208	ENST00000559604	SPATA31A3	Q5VYP0	1347 aa		27.86	■■■□□ 2.05
KNSTRN-208	ENST00000559604	RBM6	P78332	1123 aa	Known RBP	27.85	■■■□□ 2.05
KNSTRN-208	ENST00000559604	KRT28	Q7Z3Y7	464 aa		27.85	■■■□□ 2.05
KNSTRN-208	ENST00000559604	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.84	■■■□□ 2.05
KNSTRN-208	ENST00000559604	ANKAR	Q7Z5J8	1434 aa		27.84	■■■□□ 2.05
KNSTRN-208	ENST00000559604	USP21	Q9UK80	565 aa		27.83	■■■□□ 2.05
KNSTRN-208	ENST00000559604	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.82	■■■□□ 2.04
KNSTRN-208	ENST00000559604	RGS12	O14924	1447 aa		27.82	■■■□□ 2.04
KNSTRN-208	ENST00000559604	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.81	■■■□□ 2.04
KNSTRN-208	ENST00000559604	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.81	■■■□□ 2.04
KNSTRN-208	ENST00000559604	TNS3	Q68CZ2	1445 aa		27.78	■■■□□ 2.04
KNSTRN-208	ENST00000559604	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
KNSTRN-208	ENST00000559604	PSME1	Q06323	249 aa		27.77	■■■□□ 2.04
KNSTRN-208	ENST00000559604	TRPC5	Q9UL62	973 aa	Predicted RBP	27.77	■■■□□ 2.04
KNSTRN-208	ENST00000559604	KIAA1210	Q9ULL0	1709 aa		27.77	■■■□□ 2.04
KNSTRN-208	ENST00000559604	BCL9L	Q86UU0	1499 aa		27.76	■■■□□ 2.04
KNSTRN-208	ENST00000559604	ATRN	O75882	1429 aa		27.76	■■■□□ 2.04
KNSTRN-208	ENST00000559604	PRR36	Q9H6K5	1346 aa		27.76	■■■□□ 2.03
KNSTRN-208	ENST00000559604	PMFBP1	Q8TBY8	1022 aa		27.76	■■■□□ 2.03
KNSTRN-208	ENST00000559604	TULP4	Q9NRJ4	1543 aa		27.76	■■■□□ 2.03
KNSTRN-208	ENST00000559604	SBNO1	A3KN83	1393 aa		27.75	■■■□□ 2.03
KNSTRN-208	ENST00000559604	WASL	O00401	505 aa	Predicted RBP	27.74	■■■□□ 2.03
KNSTRN-208	ENST00000559604	EIF3A	Q14152	1382 aa	Known RBP	27.73	■■■□□ 2.03
KNSTRN-208	ENST00000559604	ABCA3	Q99758	1704 aa		27.71	■■■□□ 2.03
KNSTRN-208	ENST00000559604	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.71	■■■□□ 2.03
KNSTRN-208	ENST00000559604	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.7	■■■□□ 2.03
KNSTRN-208	ENST00000559604	SLIT2	O94813	1529 aa		27.69	■■■□□ 2.02
KNSTRN-208	ENST00000559604	CABLES1	Q8TDN4	633 aa		27.69	■■■□□ 2.02
KNSTRN-208	ENST00000559604	ARHGEF10	O15013	1369 aa		27.68	■■■□□ 2.02
KNSTRN-208	ENST00000559604	NBPF1	Q3BBV0	1214 aa		27.67	■■■□□ 2.02
KNSTRN-208	ENST00000559604	LMOD2	Q6P5Q4	547 aa		27.67	■■■□□ 2.02
KNSTRN-208	ENST00000559604	ALS2	Q96Q42	1657 aa		27.65	■■■□□ 2.02
KNSTRN-208	ENST00000559604	ATP7B	P35670	1465 aa		27.65	■■■□□ 2.02
KNSTRN-208	ENST00000559604	ITSN1	Q15811	1721 aa		27.65	■■■□□ 2.02
KNSTRN-208	ENST00000559604	PLEKHG5	O94827	1062 aa		27.65	■■■□□ 2.02
KNSTRN-208	ENST00000559604	GPRASP1	Q5JY77	1395 aa		27.64	■■■□□ 2.02
KNSTRN-208	ENST00000559604	HAP1	P54257	671 aa	Predicted RBP	27.64	■■■□□ 2.02
KNSTRN-208	ENST00000559604	UNC5CL	Q8IV45	518 aa		27.64	■■■□□ 2.02
KNSTRN-208	ENST00000559604	NUDT16	Q96DE0	195 aa	Known RBP	27.62	■■■□□ 2.01
KNSTRN-208	ENST00000559604	GJD4	Q96KN9	370 aa	Predicted RBP	27.62	■■■□□ 2.01
KNSTRN-208	ENST00000559604	PLCH1	Q4KWH8	1693 aa		27.62	■■■□□ 2.01
KNSTRN-208	ENST00000559604	NGDN	Q8NEJ9	315 aa	Known RBP	27.6	■■■□□ 2.01
KNSTRN-208	ENST00000559604	L3MBTL2	Q969R5	705 aa		27.6	■■■□□ 2.01
KNSTRN-208	ENST00000559604	SIN3A	Q96ST3	1273 aa		27.6	■■■□□ 2.01
KNSTRN-208	ENST00000559604	CDK19	Q9BWU1	502 aa		27.6	■■■□□ 2.01
KNSTRN-208	ENST00000559604	GLI3	P10071	1580 aa		27.6	■■■□□ 2.01
KNSTRN-208	ENST00000559604	NWD2	Q9ULI1	1742 aa		27.59	■■■□□ 2.01
KNSTRN-208	ENST00000559604	RALGAPB	Q86X10	1494 aa		27.58	■■■□□ 2.01
KNSTRN-208	ENST00000559604	TOPAZ1	Q8N9V7	1692 aa		27.58	■■■□□ 2.01
KNSTRN-208	ENST00000559604	ATAD2	Q6PL18	1390 aa		27.57	■■■□□ 2
KNSTRN-208	ENST00000559604	CRYBG1	Q9Y4K1	1723 aa		27.56	■■■□□ 2
KNSTRN-208	ENST00000559604	FAM83G	A6ND36	823 aa		27.54	■■■□□ 2
KNSTRN-208	ENST00000559604	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.52	■■■□□ 2
KNSTRN-208	ENST00000559604	PAK3	O75914	559 aa	Predicted RBP	27.52	■■■□□ 2
KNSTRN-208	ENST00000559604	TRPM1	Q7Z4N2	1603 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms