RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 HSPA1LP34931 641 aa28.07■■■□□ 2.08
SHF-205ENST00000559566 MST1RQ04912 1400 aa28.07■■■□□ 2.08
SHF-205ENST00000559566 SAFB2Q14151 953 aaKnown RBP eCLIP28.05■■■□□ 2.08
SHF-205ENST00000559566 ROBO1Q9Y6N7 1651 aa28.04■■■□□ 2.08
SHF-205ENST00000559566 TRPM1Q7Z4N2 1603 aa28.03■■■□□ 2.08
SHF-205ENST00000559566 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
SHF-205ENST00000559566 CCER1Q8TC90 406 aaPredicted RBP28.03■■■□□ 2.08
SHF-205ENST00000559566 CDC42BPGQ6DT37 1551 aa28■■■□□ 2.07
SHF-205ENST00000559566 POGKQ9P215 609 aa27.99■■■□□ 2.07
SHF-205ENST00000559566 ARHGEF28Q8N1W1 1705 aaKnown RBP27.98■■■□□ 2.07
SHF-205ENST00000559566 C1orf167Q5SNV9 1468 aa27.98■■■□□ 2.07
SHF-205ENST00000559566 BRINP3Q76B58 766 aa27.98■■■□□ 2.07
SHF-205ENST00000559566 ROCK2O75116 1388 aaKnown RBP27.94■■■□□ 2.06
SHF-205ENST00000559566 MINK1Q8N4C8 1332 aaPredicted RBP27.93■■■□□ 2.06
SHF-205ENST00000559566 NUTM2FA1L443 756 aa27.93■■■□□ 2.06
SHF-205ENST00000559566 HIRIP3Q9BW71 556 aaPredicted RBP27.93■■■□□ 2.06
SHF-205ENST00000559566 RALGAPBQ86X10 1494 aa27.92■■■□□ 2.06
SHF-205ENST00000559566 GPRASP1Q5JY77 1395 aa27.92■■■□□ 2.06
SHF-205ENST00000559566 ORAI2Q96SN7 254 aa27.92■■■□□ 2.06
SHF-205ENST00000559566 ADGRB2O60241 1585 aa27.9■■■□□ 2.06
SHF-205ENST00000559566 FMN2Q9NZ56 1722 aa27.89■■■□□ 2.06
SHF-205ENST00000559566 DDX17Q92841 729 aaKnown RBP27.89■■■□□ 2.06
SHF-205ENST00000559566 AHDC1Q5TGY3 1603 aaPredicted RBP27.86■■■□□ 2.05
SHF-205ENST00000559566 COL16A1Q07092 1604 aaPredicted RBP27.84■■■□□ 2.05
SHF-205ENST00000559566 TIMELESSQ9UNS1 1208 aa27.83■■■□□ 2.05
SHF-205ENST00000559566 CENPJQ9HC77 1338 aaPredicted RBP27.83■■■□□ 2.05
SHF-205ENST00000559566 PHLPP1O60346 1717 aa27.83■■■□□ 2.05
SHF-205ENST00000559566 USP32Q8NFA0 1604 aa27.82■■■□□ 2.04
SHF-205ENST00000559566 WASLO00401 505 aaPredicted RBP27.82■■■□□ 2.04
SHF-205ENST00000559566 ESCO1Q5FWF5 840 aa27.82■■■□□ 2.04
SHF-205ENST00000559566 CARD11Q9BXL7 1154 aa27.82■■■□□ 2.04
SHF-205ENST00000559566 PRR36Q9H6K5 1346 aa27.82■■■□□ 2.04
SHF-205ENST00000559566 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
SHF-205ENST00000559566 QRICH2Q9H0J4 1663 aa27.77■■■□□ 2.04
SHF-205ENST00000559566 TULP4Q9NRJ4 1543 aa27.77■■■□□ 2.04
SHF-205ENST00000559566 ANKARQ7Z5J8 1434 aa27.76■■■□□ 2.04
SHF-205ENST00000559566 CDK19Q9BWU1 502 aa27.75■■■□□ 2.03
SHF-205ENST00000559566 RGPD8O14715 1765 aaPredicted RBP27.74■■■□□ 2.03
SHF-205ENST00000559566 ATP7BP35670 1465 aa27.73■■■□□ 2.03
SHF-205ENST00000559566 FOXO3O43524 673 aa27.73■■■□□ 2.03
SHF-205ENST00000559566 EIF3AQ14152 1382 aaKnown RBP27.72■■■□□ 2.03
SHF-205ENST00000559566 SOS2Q07890 1332 aaPredicted RBP27.71■■■□□ 2.03
SHF-205ENST00000559566 XPCQ01831 940 aaPredicted RBP27.71■■■□□ 2.03
SHF-205ENST00000559566 PHF8Q9UPP1 1060 aa27.71■■■□□ 2.03
SHF-205ENST00000559566 PXDNQ92626 1479 aa27.7■■■□□ 2.02
SHF-205ENST00000559566 PMFBP1Q8TBY8 1022 aa27.69■■■□□ 2.02
SHF-205ENST00000559566 NUDT16Q96DE0 195 aaKnown RBP27.69■■■□□ 2.02
SHF-205ENST00000559566 JCADQ9P266 1359 aa27.69■■■□□ 2.02
SHF-205ENST00000559566 CABP2Q9NPB3 220 aa27.67■■■□□ 2.02
SHF-205ENST00000559566 KIF1AQ12756 1690 aa27.67■■■□□ 2.02
SHF-205ENST00000559566 NPHP3Q7Z494 1330 aa27.67■■■□□ 2.02
SHF-205ENST00000559566 MED1Q15648 1581 aaPredicted RBP27.65■■■□□ 2.02
SHF-205ENST00000559566 SBNO2Q9Y2G9 1366 aa27.63■■■□□ 2.01
SHF-205ENST00000559566 SRPK2P78362 688 aaKnown RBP27.63■■■□□ 2.01
SHF-205ENST00000559566 PNPLA6Q8IY17 1366 aa27.62■■■□□ 2.01
SHF-205ENST00000559566 USP47Q96K76 1375 aa27.62■■■□□ 2.01
SHF-205ENST00000559566 ST20-MTHFSA0A0A6YYL1 179 aa27.62■■■□□ 2.01
SHF-205ENST00000559566 LRRC59Q96AG4 307 aaKnown RBP27.62■■■□□ 2.01
SHF-205ENST00000559566 TOPAZ1Q8N9V7 1692 aa27.62■■■□□ 2.01
SHF-205ENST00000559566 TESK2Q96S53 571 aa27.61■■■□□ 2.01
SHF-205ENST00000559566 SHPRHQ149N8 1683 aa27.61■■■□□ 2.01
SHF-205ENST00000559566 KRT28Q7Z3Y7 464 aa27.6■■■□□ 2.01
SHF-205ENST00000559566 EVC2Q86UK5 1308 aa27.6■■■□□ 2.01
SHF-205ENST00000559566 LRP6O75581 1613 aa27.59■■■□□ 2.01
SHF-205ENST00000559566 CCDC61Q9Y6R9 512 aa27.59■■■□□ 2.01
SHF-205ENST00000559566 PLEKHG3A1L390 1219 aa27.55■■■□□ 2
SHF-205ENST00000559566 PPIP5K1Q6PFW1 1433 aa27.55■■■□□ 2
SHF-205ENST00000559566 ITSN1Q15811 1721 aa27.55■■■□□ 2
SHF-205ENST00000559566 PSME1Q06323 249 aa27.54■■■□□ 2
SHF-205ENST00000559566 SPATA31A6Q5VVP1 1343 aa27.54■■■□□ 2
SHF-205ENST00000559566 SPATA31A3Q5VYP0 1347 aa27.54■■■□□ 2
SHF-205ENST00000559566 NGDNQ8NEJ9 315 aaKnown RBP27.54■■■□□ 2
SHF-205ENST00000559566 POLR3AO14802 1390 aaPredicted RBP27.53■■■□□ 2
SHF-205ENST00000559566 ACEP12821 1306 aa27.53■■■□□ 2
SHF-205ENST00000559566 TNS3Q68CZ2 1445 aa27.51■■□□□ 1.99
SHF-205ENST00000559566 SBNO1A3KN83 1393 aa27.51■■□□□ 1.99
SHF-205ENST00000559566 DISP3Q9P2K9 1392 aa27.51■■□□□ 1.99
SHF-205ENST00000559566 TRPM3Q9HCF6 1732 aaPredicted RBP27.51■■□□□ 1.99
SHF-205ENST00000559566 NUTM2BA6NNL0 878 aaPredicted RBP27.51■■□□□ 1.99
SHF-205ENST00000559566 NUTM2EB1AL46 878 aaPredicted RBP27.51■■□□□ 1.99
SHF-205ENST00000559566 NUTM2AQ8IVF1 878 aaPredicted RBP27.51■■□□□ 1.99
SHF-205ENST00000559566 CABP1Q9NZU7 370 aa27.51■■□□□ 1.99
SHF-205ENST00000559566 COL22A1Q8NFW1 1626 aaPredicted RBP27.49■■□□□ 1.99
SHF-205ENST00000559566 ATAD2Q6PL18 1390 aa27.47■■□□□ 1.99
SHF-205ENST00000559566 RGS17Q9UGC6 210 aaPredicted RBP27.44■■□□□ 1.98
SHF-205ENST00000559566 HSPA5P11021 654 aaKnown RBP27.42■■□□□ 1.98
SHF-205ENST00000559566 LMOD2Q6P5Q4 547 aa27.42■■□□□ 1.98
SHF-205ENST00000559566 ALS2Q96Q42 1657 aa27.42■■□□□ 1.98
SHF-205ENST00000559566 PLEKHG5O94827 1062 aa27.41■■□□□ 1.98
SHF-205ENST00000559566 CABLES1Q8TDN4 633 aa27.41■■□□□ 1.98
SHF-205ENST00000559566 PAK3O75914 559 aaPredicted RBP27.4■■□□□ 1.98
SHF-205ENST00000559566 CD163L1Q9NR16 1453 aa27.39■■□□□ 1.98
SHF-205ENST00000559566 ADAMTS2O95450 1211 aa27.39■■□□□ 1.98
SHF-205ENST00000559566 SLC12A5Q9H2X9 1139 aa27.39■■□□□ 1.98
SHF-205ENST00000559566 USP6P35125 1406 aa27.39■■□□□ 1.97
SHF-205ENST00000559566 ARHGEF10O15013 1369 aa27.38■■□□□ 1.97
SHF-205ENST00000559566 MEX3CQ5U5Q3 659 aaKnown RBP27.38■■□□□ 1.97
SHF-205ENST00000559566 PUS7Q96PZ0 661 aaKnown RBP27.38■■□□□ 1.97
SHF-205ENST00000559566 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
SHF-205ENST00000559566 CPSF1Q10570 1443 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms