RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 PLEKHH1Q9ULM0 1364 aa14.68□□□□□ -0.06
SPG11-217ENST00000559511 CCDC136Q96JN2 1154 aa14.68□□□□□ -0.06
SPG11-217ENST00000559511 YTHDC2Q9H6S0 1430 aaKnown RBP14.67□□□□□ -0.06
SPG11-217ENST00000559511 NRXN3Q9Y4C0 1643 aa14.67□□□□□ -0.06
SPG11-217ENST00000559511 NSD3Q9BZ95 1437 aa14.67□□□□□ -0.06
SPG11-217ENST00000559511 SLC12A5Q9H2X9 1139 aa14.66□□□□□ -0.06
SPG11-217ENST00000559511 STK26Q9P289 416 aa14.66□□□□□ -0.06
SPG11-217ENST00000559511 USP32Q8NFA0 1604 aa14.65□□□□□ -0.06
SPG11-217ENST00000559511 FER1L4A9Z1Z3 1794 aa14.65□□□□□ -0.06
SPG11-217ENST00000559511 TNRQ92752 1358 aa14.65□□□□□ -0.06
SPG11-217ENST00000559511 EVC2Q86UK5 1308 aa14.65□□□□□ -0.06
SPG11-217ENST00000559511 C3P01024 1663 aa14.65□□□□□ -0.06
SPG11-217ENST00000559511 ZNF521Q96K83 1311 aa14.64□□□□□ -0.07
SPG11-217ENST00000559511 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
SPG11-217ENST00000559511 SAFB2Q14151 953 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPG11-217ENST00000559511 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
SPG11-217ENST00000559511 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
SPG11-217ENST00000559511 SHPRHQ149N8 1683 aa14.63□□□□□ -0.07
SPG11-217ENST00000559511 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
SPG11-217ENST00000559511 PRAM1Q96QH2 718 aa14.61□□□□□ -0.07
SPG11-217ENST00000559511 DLC1Q96QB1 1528 aa14.61□□□□□ -0.07
SPG11-217ENST00000559511 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
SPG11-217ENST00000559511 DUSP27Q5VZP5 1158 aa14.6□□□□□ -0.07
SPG11-217ENST00000559511 PLIN1O60240 522 aa14.6□□□□□ -0.07
SPG11-217ENST00000559511 CABP2Q9NPB3 220 aa14.6□□□□□ -0.07
SPG11-217ENST00000559511 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.59□□□□□ -0.07
SPG11-217ENST00000559511 KNDC1Q76NI1 1749 aa14.59□□□□□ -0.07
SPG11-217ENST00000559511 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
SPG11-217ENST00000559511 POGKQ9P215 609 aa14.59□□□□□ -0.07
SPG11-217ENST00000559511 MINK1Q8N4C8 1332 aaPredicted RBP14.58□□□□□ -0.07
SPG11-217ENST00000559511 APAF1O14727 1248 aa14.58□□□□□ -0.08
SPG11-217ENST00000559511 MYT1Q01538 1121 aa14.58□□□□□ -0.08
SPG11-217ENST00000559511 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
SPG11-217ENST00000559511 ANKRD36BQ8N2N9 1353 aa14.58□□□□□ -0.08
SPG11-217ENST00000559511 TNNT2P45379 298 aaPredicted RBP14.57□□□□□ -0.08
SPG11-217ENST00000559511 FANCIQ9NVI1 1328 aa14.57□□□□□ -0.08
SPG11-217ENST00000559511 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
SPG11-217ENST00000559511 TMEM2Q9UHN6 1383 aa14.57□□□□□ -0.08
SPG11-217ENST00000559511 NLRP1Q9C000 1473 aa14.56□□□□□ -0.08
SPG11-217ENST00000559511 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
SPG11-217ENST00000559511 SLFN5Q08AF3 891 aa14.56□□□□□ -0.08
SPG11-217ENST00000559511 METP08581 1390 aa14.55□□□□□ -0.08
SPG11-217ENST00000559511 ABCC11Q96J66 1382 aa14.55□□□□□ -0.08
SPG11-217ENST00000559511 SRPK2P78362 688 aaKnown RBP14.55□□□□□ -0.08
SPG11-217ENST00000559511 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
SPG11-217ENST00000559511 NINLQ9Y2I6 1382 aa14.55□□□□□ -0.08
SPG11-217ENST00000559511 ANKRD26Q9UPS8 1709 aa14.55□□□□□ -0.08
SPG11-217ENST00000559511 HDGFP51858 240 aaKnown RBP14.54□□□□□ -0.08
SPG11-217ENST00000559511 TRMT2AQ8IZ69 625 aaKnown RBP14.54□□□□□ -0.08
SPG11-217ENST00000559511 MSH5O43196 834 aa14.54□□□□□ -0.08
SPG11-217ENST00000559511 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
SPG11-217ENST00000559511 ATAD2Q6PL18 1390 aa14.54□□□□□ -0.08
SPG11-217ENST00000559511 A0A1W2PP64 1363 aa14.53□□□□□ -0.08
SPG11-217ENST00000559511 C20orf194Q5TEA3 1177 aa14.53□□□□□ -0.08
SPG11-217ENST00000559511 WAPLQ7Z5K2 1190 aa14.53□□□□□ -0.08
SPG11-217ENST00000559511 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
SPG11-217ENST00000559511 NSD2O96028 1365 aa14.52□□□□□ -0.08
SPG11-217ENST00000559511 CDK19Q9BWU1 502 aa14.52□□□□□ -0.09
SPG11-217ENST00000559511 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
SPG11-217ENST00000559511 CPS1P31327 1500 aa14.52□□□□□ -0.09
SPG11-217ENST00000559511 MTHFSP49914 203 aa14.51□□□□□ -0.09
SPG11-217ENST00000559511 KIF20BQ96Q89 1820 aa14.51□□□□□ -0.09
SPG11-217ENST00000559511 NKTRP30414 1462 aaKnown RBP14.51□□□□□ -0.09
SPG11-217ENST00000559511 ADAMTS13Q76LX8 1427 aa14.51□□□□□ -0.09
SPG11-217ENST00000559511 ANP32EQ9BTT0 268 aa14.5□□□□□ -0.09
SPG11-217ENST00000559511 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
SPG11-217ENST00000559511 TECPR2O15040 1411 aa14.5□□□□□ -0.09
SPG11-217ENST00000559511 LTKP29376 864 aa14.5□□□□□ -0.09
SPG11-217ENST00000559511 SLIT1O75093 1534 aa14.49□□□□□ -0.09
SPG11-217ENST00000559511 PLEKHG1Q9ULL1 1385 aa14.49□□□□□ -0.09
SPG11-217ENST00000559511 RIMS1Q86UR5 1692 aaKnown RBP14.49□□□□□ -0.09
SPG11-217ENST00000559511 E9PSI1 815 aa14.48□□□□□ -0.09
SPG11-217ENST00000559511 FAM135BQ49AJ0 1406 aa14.48□□□□□ -0.09
SPG11-217ENST00000559511 NGEFQ8N5V2 710 aa14.48□□□□□ -0.09
SPG11-217ENST00000559511 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
SPG11-217ENST00000559511 PLPPR3Q6T4P5 718 aa14.48□□□□□ -0.09
SPG11-217ENST00000559511 TXNDC2Q86VQ3 553 aa14.48□□□□□ -0.09
SPG11-217ENST00000559511 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
SPG11-217ENST00000559511 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
SPG11-217ENST00000559511 MED14O60244 1454 aa14.47□□□□□ -0.09
SPG11-217ENST00000559511 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
SPG11-217ENST00000559511 SIRT1Q96EB6 747 aa14.47□□□□□ -0.09
SPG11-217ENST00000559511 CFAP53Q96M91 514 aa14.46□□□□□ -0.09
SPG11-217ENST00000559511 GGNBP2Q9H3C7 697 aa14.45□□□□□ -0.1
SPG11-217ENST00000559511 CABP1Q9NZU7 370 aa14.45□□□□□ -0.1
SPG11-217ENST00000559511 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
SPG11-217ENST00000559511 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.45□□□□□ -0.1
SPG11-217ENST00000559511 ATP7BP35670 1465 aa14.45□□□□□ -0.1
SPG11-217ENST00000559511 TCP11L2Q8N4U5 519 aa14.45□□□□□ -0.1
SPG11-217ENST00000559511 AKAP12Q02952 1782 aa14.44□□□□□ -0.1
SPG11-217ENST00000559511 WASLO00401 505 aaPredicted RBP14.44□□□□□ -0.1
SPG11-217ENST00000559511 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
SPG11-217ENST00000559511 ROBO2Q9HCK4 1378 aa14.44□□□□□ -0.1
SPG11-217ENST00000559511 FYB1O15117 783 aa14.44□□□□□ -0.1
SPG11-217ENST00000559511 HDGFL2Q7Z4V5 671 aaPredicted RBP14.44□□□□□ -0.1
SPG11-217ENST00000559511 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
SPG11-217ENST00000559511 COL3A1P02461 1466 aaPredicted RBP14.43□□□□□ -0.1
SPG11-217ENST00000559511 MON2Q7Z3U7 1717 aa14.43□□□□□ -0.1
SPG11-217ENST00000559511 ADGRB2O60241 1585 aa14.43□□□□□ -0.1
SPG11-217ENST00000559511 BCAR3O75815 825 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms