RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 ABCF2Q9UG63 623 aa7.49□□□□□ -1.21
HMGN2P47-201ENST00000559378 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.49□□□□□ -1.21
HMGN2P47-201ENST00000559378 MRVI1Q9Y6F6 885 aa7.49□□□□□ -1.21
HMGN2P47-201ENST00000559378 IVNS1ABPQ9Y6Y0 642 aa7.49□□□□□ -1.21
HMGN2P47-201ENST00000559378 CFAP69A5D8W1 941 aa7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 SLC4A2P04920 1241 aa7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 ZC3H6P61129 1189 aaKnown RBP7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 SATB1Q01826 763 aa7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 SF3A1Q15459 793 aaKnown RBP7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 RGL3Q3MIN7 710 aa7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 SMAP1Q8IYB5 467 aaPredicted RBP7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 TMX4Q9H1E5 349 aaPredicted RBP7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 NRBP1Q9UHY1 535 aa7.48□□□□□ -1.21
HMGN2P47-201ENST00000559378 ICE2Q659A1 982 aa7.47□□□□□ -1.21
HMGN2P47-201ENST00000559378 DPH6Q7L8W6 267 aa7.47□□□□□ -1.21
HMGN2P47-201ENST00000559378 RPAINQ86UA6 219 aa7.47□□□□□ -1.21
HMGN2P47-201ENST00000559378 PLSCR2Q9NRY7 297 aa7.47□□□□□ -1.21
HMGN2P47-201ENST00000559378 CHPF2Q9P2E5 772 aa7.47□□□□□ -1.21
HMGN2P47-201ENST00000559378 hCG_2014768A0A024R1R8 64 aa7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 POU5F1Q01860 360 aaKnown RBP7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 PSME1Q06323 249 aa7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 NEXNQ0ZGT2 675 aa7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 LARGE2Q8N3Y3 721 aa7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 SCYL1Q96KG9 808 aa7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 PDCL3Q9H2J4 239 aa7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 ZBTB47Q9UFB7 747 aaPredicted RBP7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 SYNRGQ9UMZ2 1314 aa7.46□□□□□ -1.22
HMGN2P47-201ENST00000559378 PDE4DQ08499 809 aa7.45□□□□□ -1.22
HMGN2P47-201ENST00000559378 SF3B2Q13435 895 aaKnown RBP7.45□□□□□ -1.22
HMGN2P47-201ENST00000559378 TXNDC2Q86VQ3 553 aa7.45□□□□□ -1.22
HMGN2P47-201ENST00000559378 PROCA1Q8NCQ7 364 aaPredicted RBP7.45□□□□□ -1.22
HMGN2P47-201ENST00000559378 LSM14AQ8ND56 463 aaKnown RBP7.45□□□□□ -1.22
HMGN2P47-201ENST00000559378 GABBR1Q9UBS5 961 aa7.45□□□□□ -1.22
HMGN2P47-201ENST00000559378 VGLL3A8MV65 326 aa7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 PEX19P40855 299 aa7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 TDO2P48775 406 aa7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 C1QBPQ07021 282 aaKnown RBP7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 PTPROQ16827 1216 aa7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 NOP9Q86U38 636 aaKnown RBP7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 PDZRN3Q9UPQ7 1066 aa7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 TMA7Q9Y2S6 64 aaKnown RBP7.44□□□□□ -1.22
HMGN2P47-201ENST00000559378 ZCCHC6Q5VYS8 1495 aaKnown RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 BICDL2A1A5D9 508 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 VDRP11473 427 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 PDAP1Q13442 181 aaKnown RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 MCM6Q14566 821 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 CDC37Q16543 378 aaPredicted RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 TBC1D10BQ4KMP7 808 aaPredicted RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 NAALADL2Q58DX5 795 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 GJC2Q5T442 439 aaPredicted RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 BANK1Q8NDB2 785 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 ITFG2Q969R8 447 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 FAM210AQ96ND0 272 aa7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 MYCBPQ99417 103 aaPredicted RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 PAIP2Q9BPZ3 127 aaKnown RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 RBM19Q9Y4C8 960 aaKnown RBP7.43□□□□□ -1.22
HMGN2P47-201ENST00000559378 PLEKHG3A1L390 1219 aa7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 CBFA2T2O43439 604 aa7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 NGEFQ8N5V2 710 aa7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 RSPH9Q9H1X1 276 aaPredicted RBP7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 ANAPC4Q9UJX5 808 aa7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 SMC3Q9UQE7 1217 aa7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 ZBTB12Q9Y330 459 aaPredicted RBP7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
HMGN2P47-201ENST00000559378 UNC13AQ9UPW8 1703 aa7.41□□□□□ -1.22
HMGN2P47-201ENST00000559378 DNTTIP2Q5QJE6 756 aaKnown RBP7.41□□□□□ -1.22
HMGN2P47-201ENST00000559378 PCGF5Q86SE9 256 aa7.41□□□□□ -1.22
HMGN2P47-201ENST00000559378 CCDC146Q8IYE0 955 aa7.41□□□□□ -1.22
HMGN2P47-201ENST00000559378 C1orf131Q8NDD1 294 aaKnown RBP7.41□□□□□ -1.22
HMGN2P47-201ENST00000559378 KCNB2Q92953 911 aa7.41□□□□□ -1.22
HMGN2P47-201ENST00000559378 PUF60Q9UHX1 559 aaKnown RBP7.41□□□□□ -1.22
HMGN2P47-201ENST00000559378 CCDC189A1A4V9 331 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 SMAPO00193 183 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 TRIM66O15016 1216 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 IPO8O15397 1037 aaKnown RBP7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 PSMC1P62191 440 aaKnown RBP7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 LMOD3Q0VAK6 560 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 BIRC2Q13490 618 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 CCDC184Q52MB2 194 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 PPP4R3BQ5MIZ7 849 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 PABPN1Q86U42 306 aaKnown RBP eCLIP7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 PDILTQ8N807 584 aa7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 CTDP1Q9Y5B0 961 aaPredicted RBP7.4□□□□□ -1.22
HMGN2P47-201ENST00000559378 TLDC2A0PJX2 215 aa7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 SEMA3EO15041 775 aa7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 TNNT2P45379 298 aaPredicted RBP7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 XPCQ01831 940 aaPredicted RBP7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 EGFLAMQ63HQ2 1017 aa7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 POM121Q96HA1 1249 aa7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 PAGR1Q9BTK6 254 aa7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 INO80BQ9C086 356 aaPredicted RBP7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 MAP3K20Q9NYL2 800 aaKnown RBP7.39□□□□□ -1.23
HMGN2P47-201ENST00000559378 USTQ9Y2C2 406 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms