RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 C14orf93Q9H972 538 aaKnown RBP16.03■□□□□ 0.16
SPG11-216ENST00000559347 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
SPG11-216ENST00000559347 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.16
SPG11-216ENST00000559347 JCADQ9P266 1359 aa16.01■□□□□ 0.15
SPG11-216ENST00000559347 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
SPG11-216ENST00000559347 CFAP70Q5T0N1 1121 aa16.01■□□□□ 0.15
SPG11-216ENST00000559347 STK26Q9P289 416 aa16.01■□□□□ 0.15
SPG11-216ENST00000559347 KIF1AQ12756 1690 aa16.01■□□□□ 0.15
SPG11-216ENST00000559347 ILDR2Q71H61 639 aa16■□□□□ 0.15
SPG11-216ENST00000559347 DCAF11Q8TEB1 546 aa16■□□□□ 0.15
SPG11-216ENST00000559347 LRP6O75581 1613 aa15.99■□□□□ 0.15
SPG11-216ENST00000559347 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
SPG11-216ENST00000559347 WAPLQ7Z5K2 1190 aa15.97■□□□□ 0.15
SPG11-216ENST00000559347 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
SPG11-216ENST00000559347 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
SPG11-216ENST00000559347 COL22A1Q8NFW1 1626 aaPredicted RBP15.96■□□□□ 0.15
SPG11-216ENST00000559347 SIRT1Q96EB6 747 aa15.95■□□□□ 0.14
SPG11-216ENST00000559347 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
SPG11-216ENST00000559347 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
SPG11-216ENST00000559347 PXDNQ92626 1479 aa15.93■□□□□ 0.14
SPG11-216ENST00000559347 DDX17Q92841 729 aaKnown RBP15.93■□□□□ 0.14
SPG11-216ENST00000559347 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
SPG11-216ENST00000559347 ITSN1Q15811 1721 aa15.93■□□□□ 0.14
SPG11-216ENST00000559347 PNPLA6Q8IY17 1366 aa15.91■□□□□ 0.14
SPG11-216ENST00000559347 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
SPG11-216ENST00000559347 MARF1Q9Y4F3 1742 aaKnown RBP15.91■□□□□ 0.14
SPG11-216ENST00000559347 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
SPG11-216ENST00000559347 SOS2Q07890 1332 aaPredicted RBP15.9■□□□□ 0.14
SPG11-216ENST00000559347 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
SPG11-216ENST00000559347 TULP4Q9NRJ4 1543 aa15.89■□□□□ 0.13
SPG11-216ENST00000559347 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
SPG11-216ENST00000559347 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
SPG11-216ENST00000559347 ANKARQ7Z5J8 1434 aa15.88■□□□□ 0.13
SPG11-216ENST00000559347 SAFB2Q14151 953 aaKnown RBP eCLIP15.88■□□□□ 0.13
SPG11-216ENST00000559347 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
SPG11-216ENST00000559347 TRAK1Q9UPV9 953 aa15.88■□□□□ 0.13
SPG11-216ENST00000559347 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
SPG11-216ENST00000559347 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
SPG11-216ENST00000559347 NPHP3Q7Z494 1330 aa15.87■□□□□ 0.13
SPG11-216ENST00000559347 TRPM3Q9HCF6 1732 aaPredicted RBP15.86■□□□□ 0.13
SPG11-216ENST00000559347 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
SPG11-216ENST00000559347 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
SPG11-216ENST00000559347 POGKQ9P215 609 aa15.86■□□□□ 0.13
SPG11-216ENST00000559347 SOCS7O14512 581 aa15.84■□□□□ 0.13
SPG11-216ENST00000559347 ATP7BP35670 1465 aa15.84■□□□□ 0.13
SPG11-216ENST00000559347 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
SPG11-216ENST00000559347 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.12
SPG11-216ENST00000559347 EIF3AQ14152 1382 aaKnown RBP15.83■□□□□ 0.12
SPG11-216ENST00000559347 ALS2Q96Q42 1657 aa15.83■□□□□ 0.12
SPG11-216ENST00000559347 HIRIP3Q9BW71 556 aaPredicted RBP15.82■□□□□ 0.12
SPG11-216ENST00000559347 FOXO3O43524 673 aa15.81■□□□□ 0.12
SPG11-216ENST00000559347 NBPF1Q3BBV0 1214 aa15.81■□□□□ 0.12
SPG11-216ENST00000559347 MEX3CQ5U5Q3 659 aaKnown RBP15.81■□□□□ 0.12
SPG11-216ENST00000559347 CRYBG1Q9Y4K1 1723 aa15.81■□□□□ 0.12
SPG11-216ENST00000559347 TNS3Q68CZ2 1445 aa15.8■□□□□ 0.12
SPG11-216ENST00000559347 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
SPG11-216ENST00000559347 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
SPG11-216ENST00000559347 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
SPG11-216ENST00000559347 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
SPG11-216ENST00000559347 POTEAQ6S8J7 498 aa15.8■□□□□ 0.12
SPG11-216ENST00000559347 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
SPG11-216ENST00000559347 PRR36Q9H6K5 1346 aa15.79■□□□□ 0.12
SPG11-216ENST00000559347 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
SPG11-216ENST00000559347 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.79■□□□□ 0.12
SPG11-216ENST00000559347 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
SPG11-216ENST00000559347 PLCH1Q4KWH8 1693 aa15.76■□□□□ 0.11
SPG11-216ENST00000559347 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
SPG11-216ENST00000559347 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
SPG11-216ENST00000559347 ROCK2O75116 1388 aaKnown RBP15.75■□□□□ 0.11
SPG11-216ENST00000559347 AFF2P51816 1311 aa15.75■□□□□ 0.11
SPG11-216ENST00000559347 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
SPG11-216ENST00000559347 GPRASP1Q5JY77 1395 aa15.75■□□□□ 0.11
SPG11-216ENST00000559347 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
SPG11-216ENST00000559347 CENPJQ9HC77 1338 aaPredicted RBP15.74■□□□□ 0.11
SPG11-216ENST00000559347 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
SPG11-216ENST00000559347 KRT28Q7Z3Y7 464 aa15.74■□□□□ 0.11
SPG11-216ENST00000559347 PHRF1Q9P1Y6 1649 aaKnown RBP15.74■□□□□ 0.11
SPG11-216ENST00000559347 PMFBP1Q8TBY8 1022 aa15.73■□□□□ 0.11
SPG11-216ENST00000559347 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
SPG11-216ENST00000559347 NWD2Q9ULI1 1742 aa15.72■□□□□ 0.11
SPG11-216ENST00000559347 ARHGEF10O15013 1369 aa15.72■□□□□ 0.11
SPG11-216ENST00000559347 ADAMTS2O95450 1211 aa15.71■□□□□ 0.11
SPG11-216ENST00000559347 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
SPG11-216ENST00000559347 CDK12Q9NYV4 1490 aaPredicted RBP15.71■□□□□ 0.1
SPG11-216ENST00000559347 PSME1Q06323 249 aa15.7■□□□□ 0.1
SPG11-216ENST00000559347 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
SPG11-216ENST00000559347 AKAP12Q02952 1782 aa15.7■□□□□ 0.1
SPG11-216ENST00000559347 NRAPQ86VF7 1730 aa15.69■□□□□ 0.1
SPG11-216ENST00000559347 NUDT16Q96DE0 195 aaKnown RBP15.69■□□□□ 0.1
SPG11-216ENST00000559347 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
SPG11-216ENST00000559347 SLIT2O94813 1529 aa15.68■□□□□ 0.1
SPG11-216ENST00000559347 PPIP5K1Q6PFW1 1433 aa15.67■□□□□ 0.1
SPG11-216ENST00000559347 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
SPG11-216ENST00000559347 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
SPG11-216ENST00000559347 BCL9LQ86UU0 1499 aa15.66■□□□□ 0.1
SPG11-216ENST00000559347 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
SPG11-216ENST00000559347 RGS12O14924 1447 aa15.66■□□□□ 0.1
SPG11-216ENST00000559347 ATRNO75882 1429 aa15.66■□□□□ 0.1
SPG11-216ENST00000559347 SBNO2Q9Y2G9 1366 aa15.65■□□□□ 0.1
SPG11-216ENST00000559347 FNBP4Q8N3X1 1017 aaPredicted RBP15.65■□□□□ 0.1
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