RNA–Protein interactions for RNA: ENST00000559253.1

IPO4-208, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 579 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-208ENST00000559253 WAPLQ7Z5K2 1190 aa23.71■■□□□ 1.39
IPO4-208ENST00000559253 NHSL1Q5SYE7 1610 aa23.7■■□□□ 1.38
IPO4-208ENST00000559253 PLEKHH1Q9ULM0 1364 aa23.68■■□□□ 1.38
IPO4-208ENST00000559253 SPATA31A6Q5VVP1 1343 aa23.68■■□□□ 1.38
IPO4-208ENST00000559253 LRRC59Q96AG4 307 aaKnown RBP23.65■■□□□ 1.38
IPO4-208ENST00000559253 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
IPO4-208ENST00000559253 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.38
IPO4-208ENST00000559253 SHPRHQ149N8 1683 aa23.64■■□□□ 1.38
IPO4-208ENST00000559253 PRAM1Q96QH2 718 aa23.64■■□□□ 1.37
IPO4-208ENST00000559253 SOS2Q07890 1332 aaPredicted RBP23.62■■□□□ 1.37
IPO4-208ENST00000559253 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
IPO4-208ENST00000559253 ILDR2Q71H61 639 aa23.61■■□□□ 1.37
IPO4-208ENST00000559253 POGKQ9P215 609 aa23.61■■□□□ 1.37
IPO4-208ENST00000559253 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
IPO4-208ENST00000559253 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
IPO4-208ENST00000559253 NPHP3Q7Z494 1330 aa23.59■■□□□ 1.37
IPO4-208ENST00000559253 ESCO1Q5FWF5 840 aa23.59■■□□□ 1.37
IPO4-208ENST00000559253 TRAK1Q9UPV9 953 aa23.59■■□□□ 1.37
IPO4-208ENST00000559253 L3MBTL2Q969R5 705 aa23.57■■□□□ 1.36
IPO4-208ENST00000559253 ANKARQ7Z5J8 1434 aa23.57■■□□□ 1.36
IPO4-208ENST00000559253 EIF3AQ14152 1382 aaKnown RBP23.56■■□□□ 1.36
IPO4-208ENST00000559253 PNPLA6Q8IY17 1366 aa23.54■■□□□ 1.36
IPO4-208ENST00000559253 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
IPO4-208ENST00000559253 KIF1AQ12756 1690 aa23.54■■□□□ 1.36
IPO4-208ENST00000559253 DDX17Q92841 729 aaKnown RBP23.53■■□□□ 1.36
IPO4-208ENST00000559253 LRP6O75581 1613 aa23.52■■□□□ 1.36
IPO4-208ENST00000559253 PXDNQ92626 1479 aa23.52■■□□□ 1.36
IPO4-208ENST00000559253 RGS17Q9UGC6 210 aaPredicted RBP23.52■■□□□ 1.36
IPO4-208ENST00000559253 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
IPO4-208ENST00000559253 ARHGEF28Q8N1W1 1705 aaKnown RBP23.5■■□□□ 1.35
IPO4-208ENST00000559253 SOCS7O14512 581 aa23.49■■□□□ 1.35
IPO4-208ENST00000559253 FOXO3O43524 673 aa23.49■■□□□ 1.35
IPO4-208ENST00000559253 NUTM2FA1L443 756 aa23.48■■□□□ 1.35
IPO4-208ENST00000559253 WASLO00401 505 aaPredicted RBP23.48■■□□□ 1.35
IPO4-208ENST00000559253 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
IPO4-208ENST00000559253 PHF8Q9UPP1 1060 aa23.48■■□□□ 1.35
IPO4-208ENST00000559253 NBPF1Q3BBV0 1214 aa23.47■■□□□ 1.35
IPO4-208ENST00000559253 TULP4Q9NRJ4 1543 aa23.47■■□□□ 1.35
IPO4-208ENST00000559253 MINK1Q8N4C8 1332 aaPredicted RBP23.46■■□□□ 1.35
IPO4-208ENST00000559253 COL22A1Q8NFW1 1626 aaPredicted RBP23.45■■□□□ 1.34
IPO4-208ENST00000559253 MEX3CQ5U5Q3 659 aaKnown RBP23.45■■□□□ 1.34
IPO4-208ENST00000559253 USP32Q8NFA0 1604 aa23.44■■□□□ 1.34
IPO4-208ENST00000559253 ZNF772Q68DY9 489 aaPredicted RBP23.43■■□□□ 1.34
IPO4-208ENST00000559253 HIRIP3Q9BW71 556 aaPredicted RBP23.43■■□□□ 1.34
IPO4-208ENST00000559253 TRPM1Q7Z4N2 1603 aa23.42■■□□□ 1.34
IPO4-208ENST00000559253 PSME1Q06323 249 aa23.42■■□□□ 1.34
IPO4-208ENST00000559253 SPATA31A3Q5VYP0 1347 aa23.41■■□□□ 1.34
IPO4-208ENST00000559253 SBNO1A3KN83 1393 aa23.4■■□□□ 1.34
IPO4-208ENST00000559253 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
IPO4-208ENST00000559253 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
IPO4-208ENST00000559253 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
IPO4-208ENST00000559253 NUTM2BA6NNL0 878 aaPredicted RBP23.4■■□□□ 1.34
IPO4-208ENST00000559253 NUTM2EB1AL46 878 aaPredicted RBP23.4■■□□□ 1.34
IPO4-208ENST00000559253 KRT28Q7Z3Y7 464 aa23.4■■□□□ 1.34
IPO4-208ENST00000559253 NUTM2AQ8IVF1 878 aaPredicted RBP23.4■■□□□ 1.34
IPO4-208ENST00000559253 PRR36Q9H6K5 1346 aa23.39■■□□□ 1.34
IPO4-208ENST00000559253 POTEAQ6S8J7 498 aa23.39■■□□□ 1.33
IPO4-208ENST00000559253 ROCK2O75116 1388 aaKnown RBP23.38■■□□□ 1.33
IPO4-208ENST00000559253 RGPD8O14715 1765 aaPredicted RBP23.37■■□□□ 1.33
IPO4-208ENST00000559253 ATP7BP35670 1465 aa23.37■■□□□ 1.33
IPO4-208ENST00000559253 TNS3Q68CZ2 1445 aa23.37■■□□□ 1.33
IPO4-208ENST00000559253 CLSPNQ9HAW4 1339 aa23.36■■□□□ 1.33
IPO4-208ENST00000559253 XPCQ01831 940 aaPredicted RBP23.36■■□□□ 1.33
IPO4-208ENST00000559253 NUDT16Q96DE0 195 aaKnown RBP23.35■■□□□ 1.33
IPO4-208ENST00000559253 CDK19Q9BWU1 502 aa23.35■■□□□ 1.33
IPO4-208ENST00000559253 ARHGEF10O15013 1369 aa23.35■■□□□ 1.33
IPO4-208ENST00000559253 ITSN1Q15811 1721 aa23.33■■□□□ 1.33
IPO4-208ENST00000559253 NBPF8Q3BBV2 869 aa23.33■■□□□ 1.33
IPO4-208ENST00000559253 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
IPO4-208ENST00000559253 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
IPO4-208ENST00000559253 AFF2P51816 1311 aa23.33■■□□□ 1.32
IPO4-208ENST00000559253 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
IPO4-208ENST00000559253 FNBP4Q8N3X1 1017 aaPredicted RBP23.31■■□□□ 1.32
IPO4-208ENST00000559253 C8orf37Q96NL8 207 aa23.31■■□□□ 1.32
IPO4-208ENST00000559253 POLR3AO14802 1390 aaPredicted RBP23.3■■□□□ 1.32
IPO4-208ENST00000559253 ADAMTS2O95450 1211 aa23.3■■□□□ 1.32
IPO4-208ENST00000559253 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
IPO4-208ENST00000559253 NGDNQ8NEJ9 315 aaKnown RBP23.29■■□□□ 1.32
IPO4-208ENST00000559253 NGLY1Q96IV0 654 aa23.29■■□□□ 1.32
IPO4-208ENST00000559253 SBNO2Q9Y2G9 1366 aa23.28■■□□□ 1.32
IPO4-208ENST00000559253 TIMELESSQ9UNS1 1208 aa23.28■■□□□ 1.32
IPO4-208ENST00000559253 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
IPO4-208ENST00000559253 QRICH2Q9H0J4 1663 aa23.28■■□□□ 1.32
IPO4-208ENST00000559253 CDK12Q9NYV4 1490 aaPredicted RBP23.27■■□□□ 1.32
IPO4-208ENST00000559253 TRPM3Q9HCF6 1732 aaPredicted RBP23.27■■□□□ 1.32
IPO4-208ENST00000559253 EVC2Q86UK5 1308 aa23.26■■□□□ 1.31
IPO4-208ENST00000559253 RXRBP28702 533 aa23.24■■□□□ 1.31
IPO4-208ENST00000559253 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
IPO4-208ENST00000559253 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
IPO4-208ENST00000559253 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
IPO4-208ENST00000559253 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
IPO4-208ENST00000559253 ALS2Q96Q42 1657 aa23.22■■□□□ 1.31
IPO4-208ENST00000559253 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
IPO4-208ENST00000559253 ACEP12821 1306 aa23.22■■□□□ 1.31
IPO4-208ENST00000559253 RBM6P78332 1123 aaKnown RBP23.21■■□□□ 1.31
IPO4-208ENST00000559253 QTRT2Q9H974 415 aaKnown RBP23.21■■□□□ 1.31
IPO4-208ENST00000559253 USP21Q9UK80 565 aa23.21■■□□□ 1.31
IPO4-208ENST00000559253 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
IPO4-208ENST00000559253 TRPC5Q9UL62 973 aaPredicted RBP23.2■■□□□ 1.3
IPO4-208ENST00000559253 LMOD2Q6P5Q4 547 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms