RNA–Protein interactions for RNA: ENST00000559162.5

AP3S2-209, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 357 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-209ENST00000559162 PNPLA6Q8IY17 1366 aa15.34■□□□□ 0.05
AP3S2-209ENST00000559162 C14orf93Q9H972 538 aaKnown RBP15.33■□□□□ 0.04
AP3S2-209ENST00000559162 STK26Q9P289 416 aa15.33■□□□□ 0.04
AP3S2-209ENST00000559162 SOS2Q07890 1332 aaPredicted RBP15.33■□□□□ 0.04
AP3S2-209ENST00000559162 TMEM132EQ6IEE7 984 aa15.32■□□□□ 0.04
AP3S2-209ENST00000559162 DHX57Q6P158 1386 aaKnown RBP15.32■□□□□ 0.04
AP3S2-209ENST00000559162 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
AP3S2-209ENST00000559162 DDX17Q92841 729 aaKnown RBP15.31■□□□□ 0.04
AP3S2-209ENST00000559162 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
AP3S2-209ENST00000559162 ORAI2Q96SN7 254 aa15.31■□□□□ 0.04
AP3S2-209ENST00000559162 DLC1Q96QB1 1528 aa15.31■□□□□ 0.04
AP3S2-209ENST00000559162 NUTM2BA6NNL0 878 aaPredicted RBP15.3■□□□□ 0.04
AP3S2-209ENST00000559162 NUTM2EB1AL46 878 aaPredicted RBP15.3■□□□□ 0.04
AP3S2-209ENST00000559162 KIF1AQ12756 1690 aa15.3■□□□□ 0.04
AP3S2-209ENST00000559162 NPHP3Q7Z494 1330 aa15.3■□□□□ 0.04
AP3S2-209ENST00000559162 NUTM2AQ8IVF1 878 aaPredicted RBP15.3■□□□□ 0.04
AP3S2-209ENST00000559162 PLEKHH1Q9ULM0 1364 aa15.3■□□□□ 0.04
AP3S2-209ENST00000559162 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
AP3S2-209ENST00000559162 WAPLQ7Z5K2 1190 aa15.29■□□□□ 0.04
AP3S2-209ENST00000559162 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
AP3S2-209ENST00000559162 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
AP3S2-209ENST00000559162 CFAP70Q5T0N1 1121 aa15.28■□□□□ 0.04
AP3S2-209ENST00000559162 ADGRB1O14514 1584 aa15.28■□□□□ 0.04
AP3S2-209ENST00000559162 PXDNQ92626 1479 aa15.27■□□□□ 0.04
AP3S2-209ENST00000559162 ADGRB2O60241 1585 aa15.26■□□□□ 0.03
AP3S2-209ENST00000559162 CDK12Q9NYV4 1490 aaPredicted RBP15.26■□□□□ 0.03
AP3S2-209ENST00000559162 AFF2P51816 1311 aa15.25■□□□□ 0.03
AP3S2-209ENST00000559162 DCAF11Q8TEB1 546 aa15.23■□□□□ 0.03
AP3S2-209ENST00000559162 C8orf37Q96NL8 207 aa15.23■□□□□ 0.03
AP3S2-209ENST00000559162 ANKARQ7Z5J8 1434 aa15.23■□□□□ 0.03
AP3S2-209ENST00000559162 FOXO3O43524 673 aa15.22■□□□□ 0.03
AP3S2-209ENST00000559162 RXRBP28702 533 aa15.22■□□□□ 0.03
AP3S2-209ENST00000559162 PRAM1Q96QH2 718 aa15.22■□□□□ 0.03
AP3S2-209ENST00000559162 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
AP3S2-209ENST00000559162 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
AP3S2-209ENST00000559162 POGKQ9P215 609 aa15.21■□□□□ 0.03
AP3S2-209ENST00000559162 ADAMTS2O95450 1211 aa15.2■□□□□ 0.02
AP3S2-209ENST00000559162 NGLY1Q96IV0 654 aa15.19■□□□□ 0.02
AP3S2-209ENST00000559162 KDM2AQ9Y2K7 1162 aa15.19■□□□□ 0.02
AP3S2-209ENST00000559162 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
AP3S2-209ENST00000559162 KIAA1210Q9ULL0 1709 aa15.18■□□□□ 0.02
AP3S2-209ENST00000559162 XPCQ01831 940 aaPredicted RBP15.18■□□□□ 0.02
AP3S2-209ENST00000559162 SAFB2Q14151 953 aaKnown RBP eCLIP15.18■□□□□ 0.02
AP3S2-209ENST00000559162 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
AP3S2-209ENST00000559162 RGPD8O14715 1765 aaPredicted RBP15.18■□□□□ 0.02
AP3S2-209ENST00000559162 USP32Q8NFA0 1604 aa15.17■□□□□ 0.02
AP3S2-209ENST00000559162 ARHGEF28Q8N1W1 1705 aaKnown RBP15.17■□□□□ 0.02
AP3S2-209ENST00000559162 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
AP3S2-209ENST00000559162 TRAK1Q9UPV9 953 aa15.17■□□□□ 0.02
AP3S2-209ENST00000559162 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
AP3S2-209ENST00000559162 TNS3Q68CZ2 1445 aa15.17■□□□□ 0.02
AP3S2-209ENST00000559162 SPATA31A3Q5VYP0 1347 aa15.17■□□□□ 0.02
AP3S2-209ENST00000559162 RGS12O14924 1447 aa15.16■□□□□ 0.02
AP3S2-209ENST00000559162 SBNO1A3KN83 1393 aa15.15■□□□□ 0.02
AP3S2-209ENST00000559162 PSME1Q06323 249 aa15.15■□□□□ 0.02
AP3S2-209ENST00000559162 FNBP4Q8N3X1 1017 aaPredicted RBP15.15■□□□□ 0.02
AP3S2-209ENST00000559162 QTRT2Q9H974 415 aaKnown RBP15.15■□□□□ 0.02
AP3S2-209ENST00000559162 USP21Q9UK80 565 aa15.15■□□□□ 0.02
AP3S2-209ENST00000559162 KRT28Q7Z3Y7 464 aa15.14■□□□□ 0.01
AP3S2-209ENST00000559162 TRPC5Q9UL62 973 aaPredicted RBP15.14■□□□□ 0.01
AP3S2-209ENST00000559162 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
AP3S2-209ENST00000559162 ARHGEF10O15013 1369 aa15.13■□□□□ 0.01
AP3S2-209ENST00000559162 ATRNO75882 1429 aa15.13■□□□□ 0.01
AP3S2-209ENST00000559162 MINK1Q8N4C8 1332 aaPredicted RBP15.13■□□□□ 0.01
AP3S2-209ENST00000559162 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
AP3S2-209ENST00000559162 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
AP3S2-209ENST00000559162 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
AP3S2-209ENST00000559162 ABCA3Q99758 1704 aa15.11■□□□□ 0.01
AP3S2-209ENST00000559162 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
AP3S2-209ENST00000559162 BCL9LQ86UU0 1499 aa15.1■□□□□ 0.01
AP3S2-209ENST00000559162 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
AP3S2-209ENST00000559162 ATP7BP35670 1465 aa15.09■□□□□ 0.01
AP3S2-209ENST00000559162 SLIT2O94813 1529 aa15.09■□□□□ 0.01
AP3S2-209ENST00000559162 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.015e-8■■■■□ 22.6
AP3S2-209ENST00000559162 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
AP3S2-209ENST00000559162 HAP1P54257 671 aaPredicted RBP15.08■□□□□ 0
AP3S2-209ENST00000559162 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0
AP3S2-209ENST00000559162 ALS2Q96Q42 1657 aa15.07■□□□□ 0
AP3S2-209ENST00000559162 NWD2Q9ULI1 1742 aa15.07■□□□□ 0
AP3S2-209ENST00000559162 TOPAZ1Q8N9V7 1692 aa15.06■□□□□ 0
AP3S2-209ENST00000559162 ATAD2Q6PL18 1390 aa15.06■□□□□ 0
AP3S2-209ENST00000559162 PLCH1Q4KWH8 1693 aa15.06■□□□□ 0
AP3S2-209ENST00000559162 LMOD2Q6P5Q4 547 aa15.05■□□□□ -0
AP3S2-209ENST00000559162 UNC5CLQ8IV45 518 aa15.05■□□□□ -0
AP3S2-209ENST00000559162 NGDNQ8NEJ9 315 aaKnown RBP15.04■□□□□ -0
AP3S2-209ENST00000559162 NUDT16Q96DE0 195 aaKnown RBP15.03■□□□□ -0
AP3S2-209ENST00000559162 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
AP3S2-209ENST00000559162 GLI3P10071 1580 aa15.02■□□□□ -0
AP3S2-209ENST00000559162 RALGAPBQ86X10 1494 aa15.02■□□□□ -0
AP3S2-209ENST00000559162 CABLES1Q8TDN4 633 aa15.02■□□□□ -0
AP3S2-209ENST00000559162 CRYBG1Q9Y4K1 1723 aa15.02□□□□□ -0.01
AP3S2-209ENST00000559162 CENPJQ9HC77 1338 aaPredicted RBP15.01□□□□□ -0.01
AP3S2-209ENST00000559162 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
AP3S2-209ENST00000559162 NBPF1Q3BBV0 1214 aa15.01□□□□□ -0.01
AP3S2-209ENST00000559162 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
AP3S2-209ENST00000559162 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
AP3S2-209ENST00000559162 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
AP3S2-209ENST00000559162 COL14A1Q05707 1796 aaKnown RBP15.01□□□□□ -0.01
AP3S2-209ENST00000559162 POLR3AO14802 1390 aaPredicted RBP15□□□□□ -0.01
AP3S2-209ENST00000559162 CCDC61Q9Y6R9 512 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms