RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 USP21Q9UK80 565 aa11.65□□□□□ -0.54
HMG20A-207ENST00000559035 ORAI2Q96SN7 254 aa11.63□□□□□ -0.55
HMG20A-207ENST00000559035 KIF1BO60333 1816 aa11.63□□□□□ -0.55
HMG20A-207ENST00000559035 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
HMG20A-207ENST00000559035 SLIT2O94813 1529 aa11.62□□□□□ -0.55
HMG20A-207ENST00000559035 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
HMG20A-207ENST00000559035 PPLO60437 1756 aa11.62□□□□□ -0.55
HMG20A-207ENST00000559035 BLMP54132 1417 aaPredicted RBP11.61□□□□□ -0.55
HMG20A-207ENST00000559035 USP32Q8NFA0 1604 aa11.61□□□□□ -0.55
HMG20A-207ENST00000559035 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
HMG20A-207ENST00000559035 CCDC125Q86Z20 511 aa11.6□□□□□ -0.55
HMG20A-207ENST00000559035 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
HMG20A-207ENST00000559035 TECPR2O15040 1411 aa11.6□□□□□ -0.55
HMG20A-207ENST00000559035 KNDC1Q76NI1 1749 aa11.59□□□□□ -0.55
HMG20A-207ENST00000559035 ABCA3Q99758 1704 aa11.59□□□□□ -0.55
HMG20A-207ENST00000559035 FOXD1Q16676 465 aa11.58□□□□□ -0.56
HMG20A-207ENST00000559035 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.56
HMG20A-207ENST00000559035 KIF1AQ12756 1690 aa11.58□□□□□ -0.56
HMG20A-207ENST00000559035 NPHP3Q7Z494 1330 aa11.58□□□□□ -0.56
HMG20A-207ENST00000559035 FMN2Q9NZ56 1722 aa11.57□□□□□ -0.56
HMG20A-207ENST00000559035 PLCH1Q4KWH8 1693 aa11.57□□□□□ -0.56
HMG20A-207ENST00000559035 GJD4Q96KN9 370 aaPredicted RBP11.57□□□□□ -0.56
HMG20A-207ENST00000559035 NAIPQ13075 1403 aa11.56□□□□□ -0.56
HMG20A-207ENST00000559035 NWD2Q9ULI1 1742 aa11.56□□□□□ -0.56
HMG20A-207ENST00000559035 IFT172Q9UG01 1749 aa11.55□□□□□ -0.56
HMG20A-207ENST00000559035 NRAPQ86VF7 1730 aa11.53□□□□□ -0.56
HMG20A-207ENST00000559035 CCDC144AA2RUR9 1427 aa11.52□□□□□ -0.56
HMG20A-207ENST00000559035 DEFB132Q7Z7B7 95 aa11.52□□□□□ -0.57
HMG20A-207ENST00000559035 UNC5CLQ8IV45 518 aa11.52□□□□□ -0.57
HMG20A-207ENST00000559035 VGFO15240 615 aaPredicted RBP11.51□□□□□ -0.57
HMG20A-207ENST00000559035 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
HMG20A-207ENST00000559035 RPGRIP1LQ68CZ1 1315 aa11.51□□□□□ -0.57
HMG20A-207ENST00000559035 LRPPRCP42704 1394 aaKnown RBP11.51□□□□□ -0.57
HMG20A-207ENST00000559035 TNS3Q68CZ2 1445 aa11.51□□□□□ -0.57
HMG20A-207ENST00000559035 FOXO3O43524 673 aa11.5□□□□□ -0.57
HMG20A-207ENST00000559035 XPCQ01831 940 aaPredicted RBP11.5□□□□□ -0.57
HMG20A-207ENST00000559035 ESCO1Q5FWF5 840 aa11.5□□□□□ -0.57
HMG20A-207ENST00000559035 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
HMG20A-207ENST00000559035 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
HMG20A-207ENST00000559035 PLEKHH1Q9ULM0 1364 aa11.49□□□□□ -0.57
HMG20A-207ENST00000559035 ONECUT3O60422 494 aaPredicted RBP11.48□□□□□ -0.57
HMG20A-207ENST00000559035 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
HMG20A-207ENST00000559035 DISP2A7MBM2 1401 aa11.48□□□□□ -0.57
HMG20A-207ENST00000559035 PIK3C2GO75747 1445 aa11.48□□□□□ -0.57
HMG20A-207ENST00000559035 SPATA31E1Q6ZUB1 1445 aa11.48□□□□□ -0.57
HMG20A-207ENST00000559035 NRXN1Q9ULB1 1477 aa11.48□□□□□ -0.57
HMG20A-207ENST00000559035 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
HMG20A-207ENST00000559035 CRYBG1Q9Y4K1 1723 aa11.47□□□□□ -0.57
HMG20A-207ENST00000559035 THSD7AQ9UPZ6 1657 aa11.47□□□□□ -0.57
HMG20A-207ENST00000559035 VPS72Q15906 364 aa11.47□□□□□ -0.57
HMG20A-207ENST00000559035 SEPT12Q8IYM1 358 aa11.47□□□□□ -0.57
HMG20A-207ENST00000559035 TRPM3Q9HCF6 1732 aaPredicted RBP11.46□□□□□ -0.57
HMG20A-207ENST00000559035 RGPD8O14715 1765 aaPredicted RBP11.46□□□□□ -0.58
HMG20A-207ENST00000559035 ADGRB2O60241 1585 aa11.45□□□□□ -0.58
HMG20A-207ENST00000559035 SBNO1A3KN83 1393 aa11.45□□□□□ -0.58
HMG20A-207ENST00000559035 ADGRF5Q8IZF2 1346 aa11.45□□□□□ -0.58
HMG20A-207ENST00000559035 HRCP23327 699 aa11.45□□□□□ -0.58
HMG20A-207ENST00000559035 ITGAEP38570 1179 aa11.45□□□□□ -0.58
HMG20A-207ENST00000559035 ALS2Q96Q42 1657 aa11.45□□□□□ -0.58
HMG20A-207ENST00000559035 WAPLQ7Z5K2 1190 aa11.44□□□□□ -0.58
HMG20A-207ENST00000559035 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
HMG20A-207ENST00000559035 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
HMG20A-207ENST00000559035 COL14A1Q05707 1796 aaKnown RBP11.43□□□□□ -0.58
HMG20A-207ENST00000559035 ANKRD30BQ9BXX2 1392 aa11.42□□□□□ -0.58
HMG20A-207ENST00000559035 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
HMG20A-207ENST00000559035 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
HMG20A-207ENST00000559035 RREB1Q92766 1687 aa11.41□□□□□ -0.58
HMG20A-207ENST00000559035 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
HMG20A-207ENST00000559035 SF3B2Q13435 895 aaKnown RBP11.41□□□□□ -0.58
HMG20A-207ENST00000559035 ANKARQ7Z5J8 1434 aa11.41□□□□□ -0.58
HMG20A-207ENST00000559035 DLC1Q96QB1 1528 aa11.4□□□□□ -0.58
HMG20A-207ENST00000559035 KRT28Q7Z3Y7 464 aa11.4□□□□□ -0.58
HMG20A-207ENST00000559035 CABLES1Q8TDN4 633 aa11.4□□□□□ -0.58
HMG20A-207ENST00000559035 BAG6P46379 1132 aa11.39□□□□□ -0.59
HMG20A-207ENST00000559035 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
HMG20A-207ENST00000559035 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
HMG20A-207ENST00000559035 STK26Q9P289 416 aa11.38□□□□□ -0.59
HMG20A-207ENST00000559035 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
HMG20A-207ENST00000559035 ADGRB1O14514 1584 aa11.37□□□□□ -0.59
HMG20A-207ENST00000559035 FAM83GA6ND36 823 aa11.37□□□□□ -0.59
HMG20A-207ENST00000559035 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
HMG20A-207ENST00000559035 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
HMG20A-207ENST00000559035 PHRF1Q9P1Y6 1649 aaKnown RBP11.36□□□□□ -0.59
HMG20A-207ENST00000559035 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
HMG20A-207ENST00000559035 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
HMG20A-207ENST00000559035 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
HMG20A-207ENST00000559035 UTRNP46939 3433 aa11.35□□□□□ -0.59
HMG20A-207ENST00000559035 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
HMG20A-207ENST00000559035 EN1Q05925 392 aaPredicted RBP11.35□□□□□ -0.59
HMG20A-207ENST00000559035 PSME1Q06323 249 aa11.35□□□□□ -0.59
HMG20A-207ENST00000559035 PARD3Q8TEW0 1356 aa11.34□□□□□ -0.59
HMG20A-207ENST00000559035 R3HDM1Q15032 1099 aaKnown RBP11.34□□□□□ -0.59
HMG20A-207ENST00000559035 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
HMG20A-207ENST00000559035 HAP1P54257 671 aaPredicted RBP11.33□□□□□ -0.6
HMG20A-207ENST00000559035 BTG4Q9NY30 223 aa11.33□□□□□ -0.6
HMG20A-207ENST00000559035 FAM182BQ5T319 152 aa11.32□□□□□ -0.6
HMG20A-207ENST00000559035 CAMKK2Q96RR4 588 aa11.32□□□□□ -0.6
HMG20A-207ENST00000559035 C14orf93Q9H972 538 aaKnown RBP11.32□□□□□ -0.6
HMG20A-207ENST00000559035 PRR36Q9H6K5 1346 aa11.32□□□□□ -0.6
HMG20A-207ENST00000559035 LMO7Q8WWI1 1683 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms