RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 SIRT1Q96EB6 747 aa16.45■□□□□ 0.22
BMP4-204ENST00000558961 ADGRB2O60241 1585 aa16.45■□□□□ 0.22
BMP4-204ENST00000558961 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
BMP4-204ENST00000558961 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
BMP4-204ENST00000558961 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
BMP4-204ENST00000558961 LRP6O75581 1613 aa16.41■□□□□ 0.22
BMP4-204ENST00000558961 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
BMP4-204ENST00000558961 DCAF11Q8TEB1 546 aa16.41■□□□□ 0.22
BMP4-204ENST00000558961 STK26Q9P289 416 aa16.41■□□□□ 0.22
BMP4-204ENST00000558961 SPATA31A6Q5VVP1 1343 aa16.41■□□□□ 0.22
BMP4-204ENST00000558961 WAPLQ7Z5K2 1190 aa16.4■□□□□ 0.22
BMP4-204ENST00000558961 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
BMP4-204ENST00000558961 RGPD8O14715 1765 aaPredicted RBP16.38■□□□□ 0.21
BMP4-204ENST00000558961 COL22A1Q8NFW1 1626 aaPredicted RBP16.38■□□□□ 0.21
BMP4-204ENST00000558961 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
BMP4-204ENST00000558961 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
BMP4-204ENST00000558961 USP32Q8NFA0 1604 aa16.37■□□□□ 0.21
BMP4-204ENST00000558961 PXDNQ92626 1479 aa16.36■□□□□ 0.21
BMP4-204ENST00000558961 ORAI2Q96SN7 254 aa16.36■□□□□ 0.21
BMP4-204ENST00000558961 RGS17Q9UGC6 210 aaPredicted RBP16.36■□□□□ 0.21
BMP4-204ENST00000558961 KDM2AQ9Y2K7 1162 aa16.36■□□□□ 0.21
BMP4-204ENST00000558961 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
BMP4-204ENST00000558961 DDX17Q92841 729 aaKnown RBP16.34■□□□□ 0.21
BMP4-204ENST00000558961 LRRC59Q96AG4 307 aaKnown RBP16.34■□□□□ 0.21
BMP4-204ENST00000558961 PRAM1Q96QH2 718 aa16.34■□□□□ 0.21
BMP4-204ENST00000558961 ANKARQ7Z5J8 1434 aa16.34■□□□□ 0.21
BMP4-204ENST00000558961 SOCS7O14512 581 aa16.33■□□□□ 0.2
BMP4-204ENST00000558961 TRPM1Q7Z4N2 1603 aa16.33■□□□□ 0.2
BMP4-204ENST00000558961 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
BMP4-204ENST00000558961 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
BMP4-204ENST00000558961 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
BMP4-204ENST00000558961 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
BMP4-204ENST00000558961 ITSN1Q15811 1721 aa16.3■□□□□ 0.2
BMP4-204ENST00000558961 MARF1Q9Y4F3 1742 aaKnown RBP16.3■□□□□ 0.2
BMP4-204ENST00000558961 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
BMP4-204ENST00000558961 POGKQ9P215 609 aa16.28■□□□□ 0.2
BMP4-204ENST00000558961 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.2
BMP4-204ENST00000558961 TRPM3Q9HCF6 1732 aaPredicted RBP16.26■□□□□ 0.19
BMP4-204ENST00000558961 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
BMP4-204ENST00000558961 SAFB2Q14151 953 aaKnown RBP eCLIP16.26■□□□□ 0.19
BMP4-204ENST00000558961 L3MBTL2Q969R5 705 aa16.26■□□□□ 0.19
BMP4-204ENST00000558961 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
BMP4-204ENST00000558961 QRICH2Q9H0J4 1663 aa16.25■□□□□ 0.19
BMP4-204ENST00000558961 ATP7BP35670 1465 aa16.25■□□□□ 0.19
BMP4-204ENST00000558961 FOXO3O43524 673 aa16.25■□□□□ 0.19
BMP4-204ENST00000558961 POTEAQ6S8J7 498 aa16.25■□□□□ 0.19
BMP4-204ENST00000558961 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
BMP4-204ENST00000558961 ALS2Q96Q42 1657 aa16.23■□□□□ 0.19
BMP4-204ENST00000558961 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
BMP4-204ENST00000558961 PRR36Q9H6K5 1346 aa16.22■□□□□ 0.19
BMP4-204ENST00000558961 TNS3Q68CZ2 1445 aa16.22■□□□□ 0.19
BMP4-204ENST00000558961 WASLO00401 505 aaPredicted RBP16.22■□□□□ 0.19
BMP4-204ENST00000558961 NBPF1Q3BBV0 1214 aa16.22■□□□□ 0.19
BMP4-204ENST00000558961 MEX3CQ5U5Q3 659 aaKnown RBP16.22■□□□□ 0.19
BMP4-204ENST00000558961 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
BMP4-204ENST00000558961 SPATA31A3Q5VYP0 1347 aa16.21■□□□□ 0.19
BMP4-204ENST00000558961 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.19
BMP4-204ENST00000558961 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.19
BMP4-204ENST00000558961 ZNF772Q68DY9 489 aaPredicted RBP16.21■□□□□ 0.19
BMP4-204ENST00000558961 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.19
BMP4-204ENST00000558961 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.19
BMP4-204ENST00000558961 SBNO1A3KN83 1393 aa16.21■□□□□ 0.19
BMP4-204ENST00000558961 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.2■□□□□ 0.18
BMP4-204ENST00000558961 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
BMP4-204ENST00000558961 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
BMP4-204ENST00000558961 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
BMP4-204ENST00000558961 GPRASP1Q5JY77 1395 aa16.18■□□□□ 0.18
BMP4-204ENST00000558961 AFF2P51816 1311 aa16.18■□□□□ 0.18
BMP4-204ENST00000558961 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
BMP4-204ENST00000558961 KRT28Q7Z3Y7 464 aa16.17■□□□□ 0.18
BMP4-204ENST00000558961 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
BMP4-204ENST00000558961 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
BMP4-204ENST00000558961 ARHGEF10O15013 1369 aa16.15■□□□□ 0.18
BMP4-204ENST00000558961 PSME1Q06323 249 aa16.15■□□□□ 0.18
BMP4-204ENST00000558961 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
BMP4-204ENST00000558961 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
BMP4-204ENST00000558961 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
BMP4-204ENST00000558961 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
BMP4-204ENST00000558961 PLCH1Q4KWH8 1693 aa16.14■□□□□ 0.17
BMP4-204ENST00000558961 NWD2Q9ULI1 1742 aa16.14■□□□□ 0.17
BMP4-204ENST00000558961 ADAMTS2O95450 1211 aa16.13■□□□□ 0.17
BMP4-204ENST00000558961 FNBP4Q8N3X1 1017 aaPredicted RBP16.13■□□□□ 0.17
BMP4-204ENST00000558961 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
BMP4-204ENST00000558961 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
BMP4-204ENST00000558961 NUDT16Q96DE0 195 aaKnown RBP16.12■□□□□ 0.17
BMP4-204ENST00000558961 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
BMP4-204ENST00000558961 SLIT2O94813 1529 aa16.12■□□□□ 0.17
BMP4-204ENST00000558961 BCL9LQ86UU0 1499 aa16.11■□□□□ 0.17
BMP4-204ENST00000558961 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
BMP4-204ENST00000558961 SBNO2Q9Y2G9 1366 aa16.11■□□□□ 0.17
BMP4-204ENST00000558961 ATRNO75882 1429 aa16.11■□□□□ 0.17
BMP4-204ENST00000558961 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
BMP4-204ENST00000558961 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
BMP4-204ENST00000558961 RGS12O14924 1447 aa16.09■□□□□ 0.17
BMP4-204ENST00000558961 NRAPQ86VF7 1730 aa16.08■□□□□ 0.17
BMP4-204ENST00000558961 PLEKHG3A1L390 1219 aa16.08■□□□□ 0.16
BMP4-204ENST00000558961 RXRBP28702 533 aa16.08■□□□□ 0.16
BMP4-204ENST00000558961 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
BMP4-204ENST00000558961 USP21Q9UK80 565 aa16.07■□□□□ 0.16
BMP4-204ENST00000558961 PPIP5K1Q6PFW1 1433 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms